FFCP PHASE1:Hg19::chr8:144450985..144451002,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=114822 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19973 | |||
|TSSclassifier=S | |||
|UniProt=Q8TCX5 | |||
|association_with_transcript=-22bp_to_NM_052924,uc003yyb.2_5end | |||
|coexpression_cluster_id=C4731 | |||
|description=CAGE_peak_3_at_RHPN1_5end | |||
|id=chr8:144450985..144451002,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.02e-13!143;DOID:305!8.80e-13!106;DOID:162!1.67e-10!235;DOID:14566!6.16e-10!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,5.28e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.76e-15!57;UBERON:0005068!5.76e-15!57;UBERON:0006241!5.76e-15!57;UBERON:0007135!5.76e-15!57;UBERON:0007023!1.69e-13!115;UBERON:0005743!1.76e-13!86;UBERON:0001017!3.93e-13!82;UBERON:0000073!7.96e-13!94;UBERON:0001016!7.96e-13!94;UBERON:0002780!8.03e-13!41;UBERON:0001890!8.03e-13!41;UBERON:0006240!8.03e-13!41;UBERON:0000955!1.52e-12!69;UBERON:0006238!1.52e-12!69;UBERON:0003080!4.21e-12!42;UBERON:0002346!7.04e-12!90;UBERON:0002616!7.18e-12!59;UBERON:0002020!1.44e-11!34;UBERON:0003528!1.44e-11!34;UBERON:0001893!1.71e-11!34;UBERON:0002791!5.09e-11!33;UBERON:0001869!6.79e-11!32;UBERON:0003075!7.57e-11!86;UBERON:0007284!7.57e-11!86;UBERON:0003056!5.78e-09!61;UBERON:0000956!1.74e-07!25;UBERON:0000203!1.74e-07!25;UBERON:0001950!2.06e-07!20;UBERON:0002619!2.81e-07!22;UBERON:0000153!5.13e-07!129;UBERON:0007811!5.13e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.26e-12;34!UBERON:0001869;7.62e-12;32!UBERON:0003528;1.55e-11;34!UBERON:0002020;1.55e-11;34!UBERON:0002780;2.10e-11;41!UBERON:0001890;2.10e-11;41!UBERON:0002619;3.13e-11;22!UBERON:0002791;3.78e-11;32!UBERON:0001950;6.08e-11;20!UBERON:0000073;2.02e-10;53!UBERON:0002616;2.02e-10;53!UBERON:0000956;2.50e-09;25!UBERON:0000203;2.50e-09;25!UBERON:0000955;8.54e-07;68 | |||
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| |||
|short_description=p3@RHPN1 | |||
}} |
Revision as of 04:06, 14 September 2013
Short description: | p3@RHPN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_RHPN1_5end |
Coexpression cluster: | C4731_granulocyte_acute_osteosarcoma_thymus_smallcell_hippocampus_serous |
Association with transcript: | -22bp_to_NM_052924, uc003yyb.2_5end |
EntrezGene: | RHPN1 |
HGNC: | 19973 |
UniProt: | Q8TCX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.69e-18 | 56 |
neural rod | 1.69e-18 | 56 |
future spinal cord | 1.69e-18 | 56 |
neural keel | 1.69e-18 | 56 |
regional part of nervous system | 1.45e-17 | 53 |
regional part of brain | 1.45e-17 | 53 |
regional part of forebrain | 2.68e-15 | 41 |
forebrain | 2.68e-15 | 41 |
anterior neural tube | 2.68e-15 | 41 |
future forebrain | 2.68e-15 | 41 |
brain | 6.91e-15 | 68 |
future brain | 6.91e-15 | 68 |
central nervous system | 9.41e-15 | 81 |
brain grey matter | 4.05e-14 | 34 |
gray matter | 4.05e-14 | 34 |
telencephalon | 5.22e-14 | 34 |
cerebral hemisphere | 5.30e-14 | 32 |
nervous system | 1.22e-13 | 89 |
regional part of telencephalon | 1.30e-12 | 32 |
neurectoderm | 9.55e-12 | 86 |
regional part of cerebral cortex | 3.33e-11 | 22 |
neocortex | 6.43e-11 | 20 |
neural plate | 1.26e-10 | 82 |
presumptive neural plate | 1.26e-10 | 82 |
adult organism | 1.93e-10 | 114 |
cerebral cortex | 2.62e-09 | 25 |
pallium | 2.62e-09 | 25 |
pre-chordal neural plate | 3.63e-09 | 61 |
ecto-epithelium | 1.23e-08 | 104 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 5.28e-07 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.