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FFCP PHASE1:Mm9::chr4:155043280..155043340,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=76580|HGNC=|MCL_coexpression_id=1295|UniProt=Q8R516|association_with_transcript=0bp_to_ENSMUST00000103176,ENSMUST00000139289,ENSMUST00000155189,NM_145124,uc008wef.1,uc008weg.1,uc008weh.1_5end|description=CAGE_peak_1_at_Mib2_5end|id=chr4:155043280..155043340,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!1.34e-13!50;UBERON:0006238!1.34e-13!50;UBERON:0002616!3.24e-13!49;UBERON:0001049!3.80e-11!52;UBERON:0005068!3.80e-11!52;UBERON:0006241!3.80e-11!52;UBERON:0007135!3.80e-11!52;UBERON:0000033!6.17e-11!63;UBERON:0001017!6.58e-11!73;UBERON:0005743!6.58e-11!73;UBERON:0000073!2.90e-10!75;UBERON:0001016!2.90e-10!75;UBERON:0003080!2.35e-09!40;UBERON:0002780!6.96e-09!39;UBERON:0001890!6.96e-09!39;UBERON:0006240!6.96e-09!39;UBERON:0004121!6.67e-08!102;UBERON:0000924!6.67e-08!102;UBERON:0006601!6.67e-08!102;UBERON:0007023!8.92e-08!51;UBERON:0002791!3.30e-07!29;UBERON:0003528!3.30e-07!29;UBERON:0001893!3.30e-07!29;UBERON:0002346!4.79e-07!71;UBERON:0003075!4.79e-07!71;UBERON:0007284!4.79e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.21e-12,54;UBERON:0000955,6.93e-12,47;UBERON:0006238,6.93e-12,47;UBERON:0002616,1.63e-11,46;UBERON:0001049,3.80e-11,52;UBERON:0005068,3.80e-11,52;UBERON:0006241,3.80e-11,52;UBERON:0007135,3.80e-11,52;UBERON:0001017,6.58e-11,73;UBERON:0001016,2.90e-10,75;UBERON:0003080,2.35e-09,40;UBERON:0002780,6.96e-09,39;UBERON:0001890,6.96e-09,39;UBERON:0006240,6.96e-09,39;UBERON:0004121,5.86e-08,95;UBERON:0000924,5.86e-08,95;UBERON:0006601,5.86e-08,95;UBERON:0007023,8.92e-08,51;UBERON:0002346,3.06e-07,64;UBERON:0003075,3.06e-07,64;UBERON:0007284,3.06e-07,64;UBERON:0003528,3.30e-07,29;UBERON:0002791,3.30e-07,29;UBERON:0001893,3.30e-07,29|phase1_expression=7.36684696682052,25.4752047576734,24.1149596876454,40.8326685264221,51.5922601844738,13.766100296775,10.7461814673942,5.81054955487093,3.09735188733667,0.70219357896598,6.50628279256919,2.31339261086476,9.75844160607873,5.59490575481583,2.33176833270964,2.83465374345756,0.699561878128147,2.83915948822414,4.9361196098066,2.97072756258621,15.4778788074947,3.67376519443276,4.17919662622297,9.5995453676044,11.9292826154928,14.9300310669905,10.3382879078178,13.1437451938392,14.251756459228,8.56902441183765,8.42575940490158,4.44521471421742,9.22597181376855,15.8481681015439,7.79899373328441,6.15068187826422,5.10423390655923,19.6709866446347,8.5946887897618,16.2292360631877,20.5881020810855,17.7591826089196,30.5871522409627,5.91715044485213,5.87986201073184,4.58866880404204,9.38869613217647,7.41285531693518,8.78744730937887,10.304784650937,7.41928034614421,7.18762821824858,4.69791296961662,10.8804321301702,6.72187598284928,2.57259436035947,9.16907007804022,8.76642556871652,5.46254444320914,7.93486468908049,10.1413024560989,4.40497891689872,10.6715375533337,18.4479442042687,16.8107281636386,22.0248835633291,13.4820049733282,21.5162250980071,5.39185984004084,4.3201900266141,4.20649922702764,7.7125765789027,7.73039893330647,5.26710436624302,5.07980996396653,9.19218786610021,24.2254938198655,18.8977260366078,19.3544231902867,7.91317726381163,7.22752384459036,6.25096044668112,18.1468949350898,20.2594539611405,19.8637722109853,4.71405736757868,7.68807076315156,4.47358669980721,4.7707501799906,4.45872204630035,3.47837386442013,5.16254326188832,4.0798280022465,12.4131734076698,7.79731700937203,9.40856462904405,6.31999890592883,4.4311883870295,4.41636207824877,7.0667914902068,10.2815696436977,5.13305909657271,12.7402619853323,0,3.24736561516821,1.52015919285059,3.0331466700887,7.19358442230078,1.8125651855302,13.9535610720935,3.12273588179045,4.87144765299426,5.76538743140146,7.08396410597326,6.58496759959947,9.80199412371469,9.88779870937496,8.82056077211461,2.65383165584962,4.69123864847487,7.06692859073259,5.81850303762267,5.59175283654366,15.2246014446005,19.2690970268379,10.4737392635522,1.7972268675888,1.79970819298022,3.04968544975355,17.0761328921498,19.6725259212009,10.6806199295935,17.5562563394199,20.9686675010871,17.6619837875626,19.6311928311987,6.51771928642024,8.58408097209642,10.6143558542143,8.20723237957248,2.21204753036596,3.21862946206862,2.70093194708024,4.82255417074288,4.35433594568498,5.38077625196369,5.99691037182265,9.05461797586555,1.94011193639558,1.89106080167819,3.87092473160687,3.28793598641362,3.61461423993277,3.48252166522167,5.76189981942242,4.57778813682534,2.1066395619397,3.08817488537658,3.12579849335152,3.93538967817454,2.11073453982987,2.52086886045421,4.7348947117042,5.1158700254325,5.86215028972037,5.11574678450897,6.43856163359086,4.43708300995244,5.75959474697182,4.76085645829376,7.53939928776458,10.9649990568999,7.46470391989572,12.2127841071938,13.4585567081041,8.02655976558419,16.5209391491899,8.46241813323342,2.34617075588757,5.34144345279009,5.28356591420583,4.63872106633688,5.78182913996663,4.56541502670142,8.0669940462567,4.6115707322723,9.55073793441024,7.95825888164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|EntrezGene=76580
|HGNC=
|MCL_coexpression_id=1295
|UniProt=Q8R516
|association_with_transcript=0bp_to_ENSMUST00000103176,ENSMUST00000139289,ENSMUST00000155189,NM_145124,uc008wef.1,uc008weg.1,uc008weh.1_5end
|description=CAGE_peak_1_at_Mib2_5end
|id=chr4:155043280..155043340,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!1.34e-13!50;UBERON:0006238!1.34e-13!50;UBERON:0002616!3.24e-13!49;UBERON:0001049!3.80e-11!52;UBERON:0005068!3.80e-11!52;UBERON:0006241!3.80e-11!52;UBERON:0007135!3.80e-11!52;UBERON:0000033!6.17e-11!63;UBERON:0001017!6.58e-11!73;UBERON:0005743!6.58e-11!73;UBERON:0000073!2.90e-10!75;UBERON:0001016!2.90e-10!75;UBERON:0003080!2.35e-09!40;UBERON:0002780!6.96e-09!39;UBERON:0001890!6.96e-09!39;UBERON:0006240!6.96e-09!39;UBERON:0004121!6.67e-08!102;UBERON:0000924!6.67e-08!102;UBERON:0006601!6.67e-08!102;UBERON:0007023!8.92e-08!51;UBERON:0002791!3.30e-07!29;UBERON:0003528!3.30e-07!29;UBERON:0001893!3.30e-07!29;UBERON:0002346!4.79e-07!71;UBERON:0003075!4.79e-07!71;UBERON:0007284!4.79e-07!71
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.21e-12,54;UBERON:0000955,6.93e-12,47;UBERON:0006238,6.93e-12,47;UBERON:0002616,1.63e-11,46;UBERON:0001049,3.80e-11,52;UBERON:0005068,3.80e-11,52;UBERON:0006241,3.80e-11,52;UBERON:0007135,3.80e-11,52;UBERON:0001017,6.58e-11,73;UBERON:0001016,2.90e-10,75;UBERON:0003080,2.35e-09,40;UBERON:0002780,6.96e-09,39;UBERON:0001890,6.96e-09,39;UBERON:0006240,6.96e-09,39;UBERON:0004121,5.86e-08,95;UBERON:0000924,5.86e-08,95;UBERON:0006601,5.86e-08,95;UBERON:0007023,8.92e-08,51;UBERON:0002346,3.06e-07,64;UBERON:0003075,3.06e-07,64;UBERON:0007284,3.06e-07,64;UBERON:0003528,3.30e-07,29;UBERON:0002791,3.30e-07,29;UBERON:0001893,3.30e-07,29
|phase1_expression=7.36684696682052,25.4752047576734,24.1149596876454,40.8326685264221,51.5922601844738,13.766100296775,10.7461814673942,5.81054955487093,3.09735188733667,0.70219357896598,6.50628279256919,2.31339261086476,9.75844160607873,5.59490575481583,2.33176833270964,2.83465374345756,0.699561878128147,2.83915948822414,4.9361196098066,2.97072756258621,15.4778788074947,3.67376519443276,4.17919662622297,9.5995453676044,11.9292826154928,14.9300310669905,10.3382879078178,13.1437451938392,14.251756459228,8.56902441183765,8.42575940490158,4.44521471421742,9.22597181376855,15.8481681015439,7.79899373328441,6.15068187826422,5.10423390655923,19.6709866446347,8.5946887897618,16.2292360631877,20.5881020810855,17.7591826089196,30.5871522409627,5.91715044485213,5.87986201073184,4.58866880404204,9.38869613217647,7.41285531693518,8.78744730937887,10.304784650937,7.41928034614421,7.18762821824858,4.69791296961662,10.8804321301702,6.72187598284928,2.57259436035947,9.16907007804022,8.76642556871652,5.46254444320914,7.93486468908049,10.1413024560989,4.40497891689872,10.6715375533337,18.4479442042687,16.8107281636386,22.0248835633291,13.4820049733282,21.5162250980071,5.39185984004084,4.3201900266141,4.20649922702764,7.7125765789027,7.73039893330647,5.26710436624302,5.07980996396653,9.19218786610021,24.2254938198655,18.8977260366078,19.3544231902867,7.91317726381163,7.22752384459036,6.25096044668112,18.1468949350898,20.2594539611405,19.8637722109853,4.71405736757868,7.68807076315156,4.47358669980721,4.7707501799906,4.45872204630035,3.47837386442013,5.16254326188832,4.0798280022465,12.4131734076698,7.79731700937203,9.40856462904405,6.31999890592883,4.4311883870295,4.41636207824877,7.0667914902068,10.2815696436977,5.13305909657271,12.7402619853323,0,3.24736561516821,1.52015919285059,3.0331466700887,7.19358442230078,1.8125651855302,13.9535610720935,3.12273588179045,4.87144765299426,5.76538743140146,7.08396410597326,6.58496759959947,9.80199412371469,9.88779870937496,8.82056077211461,2.65383165584962,4.69123864847487,7.06692859073259,5.81850303762267,5.59175283654366,15.2246014446005,19.2690970268379,10.4737392635522,1.7972268675888,1.79970819298022,3.04968544975355,17.0761328921498,19.6725259212009,10.6806199295935,17.5562563394199,20.9686675010871,17.6619837875626,19.6311928311987,6.51771928642024,8.58408097209642,10.6143558542143,8.20723237957248,2.21204753036596,3.21862946206862,2.70093194708024,4.82255417074288,4.35433594568498,5.38077625196369,5.99691037182265,9.05461797586555,1.94011193639558,1.89106080167819,3.87092473160687,3.28793598641362,3.61461423993277,3.48252166522167,5.76189981942242,4.57778813682534,2.1066395619397,3.08817488537658,3.12579849335152,3.93538967817454,2.11073453982987,2.52086886045421,4.7348947117042,5.1158700254325,5.86215028972037,5.11574678450897,6.43856163359086,4.43708300995244,5.75959474697182,4.76085645829376,7.53939928776458,10.9649990568999,7.46470391989572,12.2127841071938,13.4585567081041,8.02655976558419,16.5209391491899,8.46241813323342,2.34617075588757,5.34144345279009,5.28356591420583,4.63872106633688,5.78182913996663,4.56541502670142,8.0669940462567,4.6115707322723,9.55073793441024,7.95825888164603,8.77338392036041,10.7858329038507,9.07779809473716,11.1519113022446,2.46568271239006,2.74196430263349,6.76246414038483,3.86937522906097,5.62462212786115,3.85747009396752,6.00747102680444,9.00421902675573,10.2049173096894,11.4759362447274,9.19003143970162,1.66845105716094,1.57247196090562,0.899448449539415,1.62288097110802,1.92941727801933,3.31013607315846,5.17853047411459,3.40483976227574,4.11842119782122,10.0637744569148,3.34926852901653,6.24075346229121,5.30415643688935,5.56131981917928,9.64887042726734,9.05290631816363,3.60033682363921,2.44447464663039,3.39490171550376,7.04070744865506,7.37027532743989,6.42717830392237,9.17128144931655,6.9359463406724,4.87222317227305,10.0456504254217,10.9788420859544,7.9435091658312,12.5844680965915,12.0633027151418,7.61467957346193,5.4094070032094,6.34654516500885,15.2523060488402,20.0431984072667,1.80328439914343,8.33154059774431,4.41711507182759,1.95219372148319,4.73931475012158,5.25731355495614,6.68396022247182,5.94460714656548,2.83367491172426,4.9683495844923,4.34816555741176,12.5315313404505,9.509985708954,11.9303954457061,6.02681749608232,8.24850614862677,6.63725691699814,2.6705869977048,4.23252979750651,3.20628635585027,4.13422650033082,7.37844355065426,9.30341855405596,6.90714086007261,6.06045543254026,7.26884543252377,12.6502330289999,6.18813259489121,20.4263763452273,4.14140516272013,5.30370603509293,6.85878512101095,8.6896714484714,11.2372355089304,10.2020392773315,13.700922710157,4.4587624532105,9.95610733059955,7.05690873775878,7.09010887648364,3.39075296061402,4.1012788951146,4.53614907211919,6.40149509005739,10.2018292820448,13.5360470467672,4.78438466233988,8.87463532241857,4.07427960213366,2.0720530270516,2.05041341581538,3.66045077130436,3.22959016988325,4.3384950220334,2.76399947608848,9.54670618015114,2.05618395827738,3.45643094115643,4.21220829205025,6.06356058441959,4.36725127492355,6.74321731924104,6.28166263512553,9.6849698534091,11.1468877030942,13.0481255748254,7.89170114157866,5.83114529571517,7.77654905148359,8.75030347548214,5.03723311563151,7.60302564708502,6.45464812551647,8.85389816938861,9.85677837601682,17.6356408202984,15.5536203379247,2.8441000856536,4.25722952109345,5.34096977257102,3.11809975146708,3.58053391334963,3.3775830312815,4.20684073319891,2.06765338044408,3.53382574818517,2.51482461961499,3.42809029465258,3.02119430293232,3.17499077413087,4.67507608726276,6.57518112484113,0.665957860122194,1.70456327558004,3.52557694364565,14.2960299583821,5.81815673898664,11.3554007045704,4.71610433973945,7.52358156053045,15.8130515932779,14.2700823317225,16.0410743763031,15.8104927756193,14.3867329151835,18.1294535373528,16.2005400055633,14.4102785031751,20.3914084042892,13.9795284172991,1.24544817101012,3.19219898720825,4.95127456686989,3.16038732188782,2.51535795153579,4.04455718590031,5.11167473943715,3.29656091582231,5.77654577265267,5.05394423527595,7.09742039692671,4.52703219326583,4.58843386602424,4.73786127796033,5.51380501973887,3.81034953026459,5.91010062318763,5.20854895252004,3.29668720642645,5.4463600449727,4.11443102862498,4.96932257246145,3.81497903915713,5.0871245821315,6.30532848782715,5.07687647350059,5.12198324043763,6.05060336307039,5.16055632614275,4.48913817326191,5.33857581558784,6.99381824866501,5.72923460437565,5.88759996506671,4.82266527452853,9.74261253957989,4.91256377735358,5.58664740525576,5.7386499620653,6.17655973534643,4.17362104116759
|short_description=p1@Mib2
}}

Revision as of 04:41, 14 September 2013

Short description:p1@Mib2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Mib2_5end
Coexpression cluster:MCL_coexpression_mm9:1295
Association with transcript: 0bp_to_ENSMUST00000103176, ENSMUST00000139289, ENSMUST00000155189, NM_145124, uc008wef.1, uc008weg.1, uc008weh.1_5end
EntrezGene:Mib2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Mib2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.37
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I525.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I624.11
CD326+ enterocyte, pool1.CNhs13542.11848-124I340.83
CD326+ enterocyte, pool2.CNhs13197.11849-124I451.59
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I713.77
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.75
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E66.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.31
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E49.76
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.59
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.83
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.84
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.94
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.67
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.18
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.93
GP2+ M cell, pool1.CNhs13228.11845-124H914.93
GP2+ M cell, pool2.CNhs13231.11846-124I110.34
GP2+ M cell, pool3.CNhs13240.11847-124I213.14
Ileum epithelium, pool1.CNhs13199.10252-104B914.25
Ileum epithelium, pool2.CNhs13232.10253-104C18.57
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.80
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.15
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G819.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H18.59
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H316.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G920.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H217.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H430.59
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.92
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.88
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.59
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B79.39
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.41
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.79
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.30
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.70
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.88
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.72
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E19.17
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.77
Mouse Granule cells, donor1.CNhs12131.11713-123C35.46
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.40
Mouse Meningeal cells, donor3.CNhs12109.11639-122D110.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C718.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E716.81
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D222.02
Mouse Microglia, donor1.CNhs12629.11718-123C813.48
Mouse Microglia, donor2.CNhs12634.11736-123E821.52
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.39
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.32
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.27
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.08
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D324.23
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.90
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.35
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.91
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.23
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.15
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E520.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I619.86
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.47
Mouse Schwann, donor1.CNhs12507.11728-123D94.77
Mouse Schwann, donor2.CNhs12573.11746-123F94.46
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C812.41
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.80
Mouse hepatocyte, donor8.CNhs13091.11824-124F69.41
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.32
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.07
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.19
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D713.95
adrenal gland, embryo E14.CNhs11038.406-44C53.12
adrenal gland, embryo E16.CNhs11004.1254-43D64.87
adrenal gland, embryo E17.CNhs11043.1263-45I15.77
adrenal gland, embryo E18.CNhs11026.1262-18F57.08
adrenal gland, neonate N00.CNhs11191.1311-23C16.58
adrenal gland, neonate N25.CNhs11223.1377-27I39.80
amnion, adult pregnant day17.5.CNhs10488.583-22A89.89
aorta, adult.CNhs10498.46-23H18.82
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F54.69
bone (os femoris), neonate N16.CNhs11225.1525-43A67.07
bone (os femoris), neonate N20.CNhs11195.1350-25C35.82
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B215.22
cerebellum, neonate N30.CNhs11135.1395-42I219.27
colon, adult.CNhs10468.36-18H710.47
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.80
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.05
corpora quadrigemina, adult.CNhs10501.16-22A417.08
corpus striatum, adult.CNhs10487.19-21D819.67
corpus striatum, neonate N00.CNhs11226.630-43F110.68
cortex, adult.CNhs10473.12-14D517.56
cortex, neonate N30.CNhs11107.1392-42F220.97
diencephalon, adult.CNhs10482.20-12F217.66
diencephalon, neonate N30.CNhs11201.1388-42B219.63
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.52
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.58
epididymis, adult.CNhs10490.58-23B210.61
eyeball, adult.CNhs10484.31-12G48.21
eyeball, embryo E12.CNhs11016.345-16C62.21
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C92.70
eyeball, embryo E17.CNhs11023.1261-18D44.82
eyeball, neonate N00.CNhs11207.633-15C64.35
eyeball, neonate N01.CNhs11140.1532-43E75.38
eyeball, neonate N02.CNhs11205.1551-44G86.00
eyeball, neonate N16.CNhs11188.777-19A29.05
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E23.87
forelimb, embryo E14.CNhs10577.413-26A83.29
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B55.76
gonad, embryo E13.CNhs11044.1564-45I64.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.13
heart, embryo E11.CNhs10586.331-24E93.94
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D44.73
heart, embryo E15.CNhs11017.431-16C85.12
heart, embryo E16.CNhs11021.457-17C65.86
heart, embryo E17.CNhs11025.479-18E55.12
heart, embryo E18.CNhs11030.1283-20G36.44
heart, neonate N00.CNhs11213.639-21E34.44
heart, neonate N03.CNhs11221.1349-25I25.76
heart, neonate N10.CNhs11118.749-24G14.76
heart, neonate N16.CNhs11209.782-15G17.54
heart, neonate N20.CNhs11127.821-26I610.96
heart, neonate N25.CNhs11196.1351-25D37.46
heart, neonate N30.CNhs11202.1390-42D212.21
hippocampus, adult.CNhs10478.13-16E813.46
hippocampus, neonate N00.CNhs11228.627-43G18.03
intestinal mucosa, adult.CNhs10506.860-29I316.52
intestine, adult.CNhs10496.178-9A38.46
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D55.34
intestine, embryo E15.CNhs10602.976-16D85.28
intestine, embryo E16.CNhs10585.463-22H44.64
intestine, embryo E17.CNhs10582.482-18D35.78
intestine, embryo E18.CNhs10526.1289-20F74.57
intestine, neonate N00.CNhs11126.644-26D18.07
intestine, neonate N01.CNhs11192.1322-23E94.61
intestine, neonate N06.CNhs11102.688-20B89.55
intestine, neonate N07.CNhs11095.720-20F27.96
intestine, neonate N10.CNhs11098.755-23A58.77
intestine, neonate N20.CNhs11187.827-18D110.79
intestine, neonate N25.CNhs11121.1352-25E39.08
intestine, neonate N30.CNhs11131.1384-42G111.15
kidney, embryo E14.CNhs10606.411-4I92.47
kidney, embryo E15.CNhs10997.434-16F82.74
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I23.87
kidney, embryo E18.CNhs11001.1288-20C75.62
kidney, neonate N00.CNhs11214.646-21G73.86
kidney, neonate N10.CNhs11206.758-6D56.01
kidney, neonate N20.CNhs11113.832-19I19.00
kidney, neonate N25.CNhs11122.1353-25F310.20
kidney, neonate N30.CNhs11203.1385-42H111.48
liver, adult pregnant day01.CNhs10466.508-5B29.19
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A33.31
liver, embryo E18.CNhs10579.499-43G45.18
liver, neonate N00.CNhs11117.641-24F43.40
liver, neonate N03.CNhs11123.1345-25G24.12
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B96.24
liver, neonate N20.CNhs11220.823-25A35.30
liver, neonate N25.CNhs11198.1368-26H15.56
liver, neonate N30.CNhs11106.1382-42D19.65
lung, adult.CNhs10474.28-22B19.05
lung, embryo E12.CNhs10522.354-16G23.60
lung, embryo E14.CNhs10604.404-26F82.44
lung, embryo E15.CNhs11020.432-17C53.39
lung, embryo E16.CNhs10998.458-17B67.04
lung, embryo E17.CNhs10605.480-44A67.37
lung, embryo E18.CNhs10583.1287-20I66.43
lung, neonate N00.CNhs11224.640-42C69.17
lung, neonate N06.CNhs11212.683-20E56.94
lung, neonate N07.CNhs11111.715-19A34.87
lung, neonate N10.CNhs11219.750-23E610.05
lung, neonate N20.CNhs11109.822-18A410.98
lung, neonate N25.CNhs11119.1359-25C77.94
lung, neonate N30.CNhs11133.1394-42H212.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A112.06
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.61
mammary gland, adult lactating day02.CNhs10480.595-22B65.41
mammary gland, adult pregnant day19.CNhs10476.588-5H26.35
medulla oblongata, adult.CNhs10477.17-12C215.25
medulla oblongata, neonate N30.CNhs11200.1396-42A320.04
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.80
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.33
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.74
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.26
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.94
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I912.53
ovary, adult.CNhs10507.91-2I79.51
ovary, embryo E18.CNhs11040.505-44H711.93
ovary, neonate N00.CNhs11217.1299-22I46.03
oviduct, adult pregnant day01.CNhs10500.988-6G68.25
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F24.23
pancreas, embryo E16.CNhs11003.460-26E53.21
pancreas, embryo E17.CNhs10599.1558-45G34.13
pancreas, embryo E18.CNhs10580.1535-43I77.38
pancreas, neonate N00.CNhs11105.645-26G99.30
pancreas, neonate N01.CNhs11138.1531-43D76.91
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B67.27
pancreas, neonate N25.CNhs11094.1555-45E212.65
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G820.43
pituitary gland, embryo E12.CNhs11018.346-16E64.14
pituitary gland, embryo E13.CNhs11009.370-44C75.30
pituitary gland, embryo E14.CNhs11037.398-44A56.86
pituitary gland, embryo E15.CNhs10592.427-16B98.69
pituitary gland, embryo E16.CNhs11036.449-43F611.24
pituitary gland, embryo E17.CNhs11039.1265-44F510.20
pituitary gland, neonate N00.CNhs11190.1308-22E913.70
placenta, adult pregnant day10.CNhs10472.539-13I74.46
placenta, adult pregnant day17.CNhs10464.577-18G39.96
prostate, adult.CNhs10470.859-1F87.06
skin, adult.CNhs10492.30-1C37.09
skin, neonate N00.CNhs11124.650-25G43.39
skin, neonate N03.CNhs11215.662-22H34.10
skin, neonate N06.CNhs11097.693-20I54.54
skin, neonate N10.CNhs11108.762-6C46.40
small intestine, neonate N16.CNhs11114.790-21I110.20
spinal cord, adult.CNhs10505.24-13C913.54
spleen, adult.CNhs10465.25-2G24.78
spleen, embryo E16.CNhs11035.461-43C18.87
spleen, embryo E18.CNhs11011.1271-21F24.07
spleen, neonate N10.CNhs11116.752-24D12.07
spleen, neonate N20.CNhs11112.824-19H12.05
spleen, neonate N25.CNhs11099.1354-25G33.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.76
stomach, adult.CNhs10503.33-1H69.55
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G83.46
stomach, embryo E16.CNhs11022.459-17D44.21
stomach, embryo E17.CNhs11006.1035-18D56.06
stomach, embryo E18.CNhs10999.1286-20C64.37
stomach, neonate N03.CNhs11193.1340-24B86.74
stomach, neonate N07.CNhs11210.718-18A96.28
stomach, neonate N25.CNhs11104.1355-25E49.68
stomach, neonate N30.CNhs11134.1386-42I111.15
submandibular gland, adult.CNhs10469.59-29C113.05
testis, adult.CNhs10504.57-7G57.89
testis, embryo E13.CNhs11031.389-23F55.83
testis, embryo E15.CNhs11034.443-27C57.78
testis, embryo E16.CNhs11033.470-26G58.75
testis, embryo E17.CNhs11029.486-18I55.04
testis, embryo E18.CNhs11027.503-18G57.60
testis, neonate N00.CNhs11189.1300-22B76.45
testis, neonate N07.CNhs11222.726-26I48.85
testis, neonate N10.CNhs11204.763-44D99.86
testis, neonate N20.CNhs11110.839-18H317.64
testis, neonate N30.CNhs11130.1391-42E215.55
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I44.26
thymus, embryo E15.CNhs11005.430-45I25.34
thymus, embryo E16.CNhs11002.456-26C53.12
thymus, embryo E17.CNhs10581.478-18C13.58
thymus, embryo E18.CNhs10595.1273-19G43.38
thymus, neonate N02.CNhs11181.1541-43F84.21
thymus, neonate N03.CNhs11137.2104-43C72.07
thymus, neonate N06.CNhs11197.681-26C43.53
thymus, neonate N07.CNhs11211.713-19D32.51
thymus, neonate N10.CNhs11194.748-24E43.43
thymus, neonate N20.CNhs11186.820-7A23.02
thymus, neonate N25.CNhs11125.1362-25G73.17
thymus, neonate N30.CNhs11132.1393-42G24.68
tongue, adult.CNhs10499.32-1B46.58
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.70
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.53
urinary bladder, adult.CNhs10481.879-12E414.30
uterus, adult pregnant day19.CNhs10497.590-15F55.82
uterus, adult.CNhs10509.92-27E511.36
vagina, adult.CNhs10502.89-27D54.72
vesicular gland, adult.CNhs10491.51-27F87.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.81
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A316.04
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.81
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A414.39
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.13
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.20
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.41
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A820.39
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.98
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H24.95
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F24.04
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.51
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.91
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.21
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.45
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.97
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.31
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.16
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.89
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I59.74
whole body, embryo E18.CNhs10516.493-3B34.91
whole body, neonate N00.CNhs10525.657-19C25.59
whole body, neonate N01.CNhs10576.659-23C65.74
whole body, neonate N06.CNhs10515.692-21D16.18
whole body, neonate N10.CNhs10518.761-6B44.17





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.21e-1254
brain6.93e-1247
future brain6.93e-1247
regional part of brain1.63e-1146
neural tube3.80e-1152
neural rod3.80e-1152
future spinal cord3.80e-1152
neural keel3.80e-1152
central nervous system6.58e-1173
nervous system2.90e-1075
anterior neural tube2.35e-0940
regional part of forebrain6.96e-0939
forebrain6.96e-0939
future forebrain6.96e-0939
ectoderm-derived structure5.86e-0895
ectoderm5.86e-0895
presumptive ectoderm5.86e-0895
adult organism8.92e-0851
neurectoderm3.06e-0764
neural plate3.06e-0764
presumptive neural plate3.06e-0764
brain grey matter3.30e-0729
regional part of telencephalon3.30e-0729
telencephalon3.30e-0729







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