FFCP PHASE1:Hg19::chr8:42038055..42038068,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5327|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9051|TSSclassifier=N|UniProt=|association_with_transcript=213bp_to_ENST00000522812_5end|coexpression_cluster_id=C471|description=CAGE_peak_3_at_PLAT_5end|id=chr8:42038055..42038068,-|ontology_enrichment_celltype=CL:0000183!4.66e-17!59;CL:0000192!3.15e-16!42;CL:0000514!3.15e-16!42;CL:0000187!8.72e-16!54;CL:0000680!1.34e-15!57;CL:0000056!1.34e-15!57;CL:0000355!1.34e-15!57;CL:0000055!2.15e-15!180;CL:0000222!3.27e-13!119;CL:0000393!5.11e-13!60;CL:0000211!5.11e-13!60;CL:0000359!1.59e-12!32;CL:0002539!2.65e-08!10;CL:0002334!7.60e-08!12;CL:0000220!1.39e-07!246;CL:0000057!1.84e-07!75;CL:0002321!2.30e-07!248;CL:0002494!6.22e-07!16|ontology_enrichment_celltype_v019=CL:0002595;8.07e-13;5!CL:0000359;5.41e-12;32!CL:0000192;7.10e-12;43!CL:0002593;5.55e-09;2!CL:0002681;2.51e-07;12!CL:0002584;2.51e-07;12|ontology_enrichment_celltype_v019_2=CL:0000192,8.05e-16,43;CL:0000514,8.05e-16,43;CL:0000680,2.65e-14,58;CL:0000056,2.65e-14,58;CL:0000355,2.65e-14,58;CL:0000187,2.22e-13,55;CL:0002595,7.76e-13,5;CL:0000359,5.82e-12,32;CL:0000393,1.08e-11,61;CL:0000211,1.08e-11,61;CL:0000222,2.41e-11,121;CL:0002593,5.58e-09,2;CL:0002681,3.23e-07,12;CL:0002584,3.23e-07,12|ontology_enrichment_development_v019=CL:0000514;7.10e-12;43!CL:0000355;3.35e-08;58|ontology_enrichment_disease=DOID:2394!3.22e-09!14|ontology_enrichment_disease_v019=DOID:0060084;6.31e-13;3!DOID:127;6.31e-13;3!DOID:0060072;8.66e-10;4!DOID:2394;7.74e-09;14|ontology_enrichment_disease_v019_2=DOID:0060084,6.47e-13,3;DOID:127,6.47e-13,3;DOID:0060072,8.83e-10,4;DOID:2394,6.02e-09,14|ontology_enrichment_uberon=UBERON:0004573!7.97e-18!33;UBERON:0004571!7.97e-18!33;UBERON:0001637!4.63e-17!42;UBERON:0003509!4.63e-17!42;UBERON:0004572!4.63e-17!42;UBERON:0005256!8.82e-15!143;UBERON:0000119!3.26e-14!312;UBERON:0002385!9.04e-14!63;UBERON:0001015!9.04e-14!63;UBERON:0000383!9.04e-14!63;UBERON:0001134!9.04e-14!61;UBERON:0002036!9.04e-14!61;UBERON:0003082!9.04e-14!61;UBERON:0000483!1.07e-13!309;UBERON:0002049!5.61e-13!79;UBERON:0007798!5.61e-13!79;UBERON:0003914!7.79e-13!118;UBERON:0000486!8.15e-13!82;UBERON:0004290!8.23e-13!70;UBERON:0004872!2.53e-12!84;UBERON:0000914!3.29e-12!83;UBERON:0002329!3.29e-12!83;UBERON:0003077!3.29e-12!83;UBERON:0003059!3.29e-12!83;UBERON:0007282!3.29e-12!83;UBERON:0009618!3.29e-12!83;UBERON:0007285!3.29e-12!83;UBERON:0001981!2.05e-11!60;UBERON:0007500!2.05e-11!60;UBERON:0004537!2.05e-11!60;UBERON:0006965!2.05e-11!60;UBERON:0000490!3.60e-11!138;UBERON:0004535!5.64e-11!110;UBERON:0000947!1.60e-10!21;UBERON:0010191!1.60e-10!21;UBERON:0001135!1.77e-10!15;UBERON:0002100!2.46e-10!216;UBERON:0001009!2.73e-10!113;UBERON:0000475!1.00e-09!365;UBERON:0000481!1.44e-09!347;UBERON:0000055!1.79e-09!69;UBERON:0000477!3.74e-09!286;UBERON:0003064!1.13e-08!37;UBERON:0004237!2.65e-08!10;UBERON:0004695!2.65e-08!10;UBERON:0002111!2.65e-08!10;UBERON:0004178!2.65e-08!10;UBERON:0004111!1.33e-07!241;UBERON:0000025!2.44e-07!194;UBERON:0006554!9.11e-07!44;UBERON:0000467!9.57e-07!625|ontology_enrichment_uberon_v019=UBERON:0003513;1.47e-13;7!UBERON:0003834;8.07e-13;5!UBERON:0001533;8.07e-13;5!UBERON:0004573;2.06e-12;33!UBERON:0004571;2.06e-12;33!UBERON:0002456;5.55e-09;2!UBERON:0001637;9.91e-09;42!UBERON:0003509;9.91e-09;42!UBERON:0004572;9.91e-09;42!UBERON:0000353;4.62e-08;15!UBERON:0001135;5.34e-08;15!UBERON:0001225;2.51e-07;12!UBERON:0008987;2.51e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0004573,8.18e-14,33;UBERON:0004571,8.18e-14,33;UBERON:0007503,8.94e-14,78;UBERON:0003513,1.43e-13,7;UBERON:0001134,4.07e-13,62;UBERON:0002036,4.07e-13,62;UBERON:0003082,4.07e-13,62;UBERON:0003834,7.76e-13,5;UBERON:0001533,7.76e-13,5;UBERON:0002385,1.40e-12,64;UBERON:0001015,1.40e-12,64;UBERON:0000383,1.40e-12,64;UBERON:0002049,2.68e-12,78;UBERON:0007798,2.68e-12,78;UBERON:0001637,2.94e-12,42;UBERON:0003509,2.94e-12,42;UBERON:0004572,2.94e-12,42;UBERON:0005256,3.70e-11,122;UBERON:0002329,6.06e-11,71;UBERON:0003059,6.06e-11,71;UBERON:0007282,6.06e-11,71;UBERON:0004290,6.06e-11,71;UBERON:0009618,6.06e-11,71;UBERON:0003077,9.76e-11,72;UBERON:0007285,9.76e-11,72;UBERON:0007524,1.55e-10,73;UBERON:0000486,4.93e-10,83;UBERON:0004535,1.20e-09,109;UBERON:0001009,2.92e-09,112;UBERON:0007500,3.10e-09,59;UBERON:0001981,3.10e-09,59;UBERON:0004537,3.10e-09,59;UBERON:0006965,3.10e-09,59;UBERON:0002456,5.58e-09,2;UBERON:0003104,5.91e-09,160;UBERON:0009142,5.91e-09,160;UBERON:0000055,6.76e-09,68;UBERON:0003914,9.95e-09,117;UBERON:0000490,2.36e-08,148;UBERON:0000483,4.17e-08,306;UBERON:0000353,5.88e-08,15;UBERON:0001135,5.96e-08,15;UBERON:0000119,6.03e-08,309;UBERON:0004872,9.74e-08,83;UBERON:0001225,3.23e-07,12;UBERON:0008987,3.23e-07,12|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0,0.331397375727916,1.34465029290355,0,0.730310090387373,1.46379839637152,0.369363174230364,0.408001382488506,0,0,0.410623275218653,0.376627918784408,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5327 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9051 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=213bp_to_ENST00000522812_5end | |||
|coexpression_cluster_id=C471 | |||
|description=CAGE_peak_3_at_PLAT_5end | |||
|id=chr8:42038055..42038068,- | |||
|ontology_enrichment_celltype=CL:0000183!4.66e-17!59;CL:0000192!3.15e-16!42;CL:0000514!3.15e-16!42;CL:0000187!8.72e-16!54;CL:0000680!1.34e-15!57;CL:0000056!1.34e-15!57;CL:0000355!1.34e-15!57;CL:0000055!2.15e-15!180;CL:0000222!3.27e-13!119;CL:0000393!5.11e-13!60;CL:0000211!5.11e-13!60;CL:0000359!1.59e-12!32;CL:0002539!2.65e-08!10;CL:0002334!7.60e-08!12;CL:0000220!1.39e-07!246;CL:0000057!1.84e-07!75;CL:0002321!2.30e-07!248;CL:0002494!6.22e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002595;8.07e-13;5!CL:0000359;5.41e-12;32!CL:0000192;7.10e-12;43!CL:0002593;5.55e-09;2!CL:0002681;2.51e-07;12!CL:0002584;2.51e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,8.05e-16,43;CL:0000514,8.05e-16,43;CL:0000680,2.65e-14,58;CL:0000056,2.65e-14,58;CL:0000355,2.65e-14,58;CL:0000187,2.22e-13,55;CL:0002595,7.76e-13,5;CL:0000359,5.82e-12,32;CL:0000393,1.08e-11,61;CL:0000211,1.08e-11,61;CL:0000222,2.41e-11,121;CL:0002593,5.58e-09,2;CL:0002681,3.23e-07,12;CL:0002584,3.23e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;7.10e-12;43!CL:0000355;3.35e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!3.22e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:0060084;6.31e-13;3!DOID:127;6.31e-13;3!DOID:0060072;8.66e-10;4!DOID:2394;7.74e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.47e-13,3;DOID:127,6.47e-13,3;DOID:0060072,8.83e-10,4;DOID:2394,6.02e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0004573!7.97e-18!33;UBERON:0004571!7.97e-18!33;UBERON:0001637!4.63e-17!42;UBERON:0003509!4.63e-17!42;UBERON:0004572!4.63e-17!42;UBERON:0005256!8.82e-15!143;UBERON:0000119!3.26e-14!312;UBERON:0002385!9.04e-14!63;UBERON:0001015!9.04e-14!63;UBERON:0000383!9.04e-14!63;UBERON:0001134!9.04e-14!61;UBERON:0002036!9.04e-14!61;UBERON:0003082!9.04e-14!61;UBERON:0000483!1.07e-13!309;UBERON:0002049!5.61e-13!79;UBERON:0007798!5.61e-13!79;UBERON:0003914!7.79e-13!118;UBERON:0000486!8.15e-13!82;UBERON:0004290!8.23e-13!70;UBERON:0004872!2.53e-12!84;UBERON:0000914!3.29e-12!83;UBERON:0002329!3.29e-12!83;UBERON:0003077!3.29e-12!83;UBERON:0003059!3.29e-12!83;UBERON:0007282!3.29e-12!83;UBERON:0009618!3.29e-12!83;UBERON:0007285!3.29e-12!83;UBERON:0001981!2.05e-11!60;UBERON:0007500!2.05e-11!60;UBERON:0004537!2.05e-11!60;UBERON:0006965!2.05e-11!60;UBERON:0000490!3.60e-11!138;UBERON:0004535!5.64e-11!110;UBERON:0000947!1.60e-10!21;UBERON:0010191!1.60e-10!21;UBERON:0001135!1.77e-10!15;UBERON:0002100!2.46e-10!216;UBERON:0001009!2.73e-10!113;UBERON:0000475!1.00e-09!365;UBERON:0000481!1.44e-09!347;UBERON:0000055!1.79e-09!69;UBERON:0000477!3.74e-09!286;UBERON:0003064!1.13e-08!37;UBERON:0004237!2.65e-08!10;UBERON:0004695!2.65e-08!10;UBERON:0002111!2.65e-08!10;UBERON:0004178!2.65e-08!10;UBERON:0004111!1.33e-07!241;UBERON:0000025!2.44e-07!194;UBERON:0006554!9.11e-07!44;UBERON:0000467!9.57e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;1.47e-13;7!UBERON:0003834;8.07e-13;5!UBERON:0001533;8.07e-13;5!UBERON:0004573;2.06e-12;33!UBERON:0004571;2.06e-12;33!UBERON:0002456;5.55e-09;2!UBERON:0001637;9.91e-09;42!UBERON:0003509;9.91e-09;42!UBERON:0004572;9.91e-09;42!UBERON:0000353;4.62e-08;15!UBERON:0001135;5.34e-08;15!UBERON:0001225;2.51e-07;12!UBERON:0008987;2.51e-07;12 | |||
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|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0,0.331397375727916,1.34465029290355,0,0.730310090387373,1.46379839637152,0.369363174230364,0.408001382488506,0,0,0.410623275218653,0.376627918784408,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.12786256184353,0,0,0,0,0.486634870302636,0.283604451492204,1.33037638477538,0.263504357079378,0,0,0.370784442784429,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0.886413581652058,0.397227542439656,14.3418310374407,1.77334191099179,0,0,0,0.622422070799533,0.134710672069688,0.326923806226917,0.151357427644931,1.15235184896,0,0,0,0.149448680551801,0,0.323745888736263,0.280901613404497,0,0.122834317311768,0,0,0,0,2.87447256726495,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0.453728732640084,0,0,0.211931901159562,0,0,0.257640540045629,0.18611685633159,0,0.0974370051611986,0,0,0.161646056818812,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,1.3725424823882,0,0,0,0.185176890317059,0,0,2.88662684050547,0,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0.179117045405697,0,1.15014803749563,0,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0,0,0,0.797814349754612,0,0,0,0.266422179016099,0.714889968290738,0,0,0,0.355391948742546,0,3.31583314765545,0.871533458600294,0.099972991182057,0,0,0,0,0,0,2.02693829334611,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0,0,0,2.27407504055985,0,0,0,0.173767228936166,0,0,0,0,0,0.303127571446259,0,0,0.248107807818777,0,0.561320188866147,0.256278298511402,0.511707249066704,0.160853921143607,1.48418066444991,0.462629081407967,0.177561725313127,0.164254312027618,0.519254429183621,0.697262270759755,0,1.00253235151642,0,1.83703117063371,0.728364672026868,1.83574180943194,1.80479845162965,0.385076685522074,0,0,0.527758144464379,1.13733384070897,1.02056223165909,0,0,0.812839312631559,2.00675909541941,0.764628819135115,3.3243040357149,0.671624264166535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275673144969061,0.107420244868274,0.145016693914229,0.0852266274161009,0,0,0,0,0,0.464845549297286,9.12955805808856,1.3940745403212,0.308033580176089,0.532306030317022,0.869932992075073,0.55597265731176,0.286249773483982,0,0,0,0,0,0,1.56989728039846,1.07923474549989,1.64722217841633,0.942499218765491,0.808729926293264,7.92551605865041,0.842516912477962,0,4.38684281336312,10.5650146756755,0.9554993798559,4.66637925447252,6.78048699721457,0,2.65375590096488,5.26141062304515,1.15755106853338,0,0,0,0.563391205064483,0.573645408816206,0,0,0.354761064070598,0.422215270595328,0,1.13841952129715,0.349934720244983,0,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0,0,0,0,0.306806047506464,0,0.622079175323615,0.179736702294654,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0.451961481561065,0.137041924646751,0,0.0633107959558787,0,0,0,0.39961921916426,0,0,0,0,0,0,0.135904206073614,0.627617077873999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0.316801009558219,0.179287339332845,0,0,0,0,10.3169924333205,18.1486513152266,20.2484163267834,0,0,0.170388021785422,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0.454947352624943,1.14186133417987,7.76377205003967,0,0,0.149254802886874,0,0.554805861502613,0,0,0.889811221596536,0.457680136793847,1.66354016139563,0.15543720058278,0.295710299979268,0.796483835818512,0,0.155262956876259,1.24411862352257,1.59505028734797,2.60872530905867,0.300515217994437,5.71207818253193,2.03435366602331,0.363697318405119,0.107410557042488,0.464033759878494,1.99047944349308,1.20008329398946,0,0,0,0.57785949122191,0,0,0,0,0,0.358177682162975,0,0,1.59020231351293,0.578742114812744,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9811912055916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47394725759087,0,0,0,0,0,0,0,0.496211178389294,0,0.511049710558381,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.285906176706625,0,0.697448552208751,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,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| |||
|short_description=p3@PLAT | |||
}} |
Revision as of 05:21, 14 September 2013
Short description: | p3@PLAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PLAT_5end |
Coexpression cluster: | C471_Smooth_Fibroblast_leiomyoma_mesenchymal_Mesothelial_meningioma_Prostate |
Association with transcript: | 213bp_to_ENST00000522812_5end |
EntrezGene: | PLAT |
HGNC: | 9051 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 8.05e-16 | 43 |
smooth muscle myoblast | 8.05e-16 | 43 |
muscle precursor cell | 2.65e-14 | 58 |
myoblast | 2.65e-14 | 58 |
multi-potent skeletal muscle stem cell | 2.65e-14 | 58 |
muscle cell | 2.22e-13 | 55 |
smooth muscle cell of the subclavian artery | 7.76e-13 | 5 |
vascular associated smooth muscle cell | 5.82e-12 | 32 |
electrically responsive cell | 1.08e-11 | 61 |
electrically active cell | 1.08e-11 | 61 |
mesodermal cell | 2.41e-11 | 121 |
smooth muscle cell of the internal thoracic artery | 5.58e-09 | 2 |
kidney cortical cell | 3.23e-07 | 12 |
renal cortical epithelial cell | 3.23e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.47e-13 | 3 |
leiomyoma | 6.47e-13 | 3 |
benign neoplasm | 8.83e-10 | 4 |
ovarian cancer | 6.02e-09 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.