FFCP PHASE1:Mm9::chr4:76523477..76523480,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:76523477..76523480,-|id=chr4:76523477..76523480,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!7.62e-30!10;UBERON:0000411!7.62e-30!10;UBERON:0001950!7.62e-30!10;UBERON:0002619!4.57e-20!17;UBERON:0000956!7.92e-19!21;UBERON:0001869!7.92e-19!21;UBERON:0000203!7.92e-19!21;UBERON:0003080!7.26e-16!40;UBERON:0002616!1.02e-15!49;UBERON:0000955!2.53e-15!50;UBERON:0006238!2.53e-15!50;UBERON:0002791!3.22e-15!29;UBERON:0003528!3.22e-15!29;UBERON:0001893!3.22e-15!29;UBERON:0002780!2.88e-14!39;UBERON:0001890!2.88e-14!39;UBERON:0006240!2.88e-14!39;UBERON:0003056!6.39e-14!49;UBERON:0001049!6.57e-13!52;UBERON:0005068!6.57e-13!52;UBERON:0006241!6.57e-13!52;UBERON:0007135!6.57e-13!52;UBERON:0000033!9.81e-13!63;UBERON:0002020!1.46e-12!34;UBERON:0002346!7.99e-11!71;UBERON:0003075!7.99e-11!71;UBERON:0007284!7.99e-11!71;UBERON:0001017!3.01e-09!73;UBERON:0005743!3.01e-09!73;UBERON:0000073!6.76e-09!75;UBERON:0001016!6.76e-09!75;UBERON:0007811!3.18e-08!86;UBERON:0004121!4.67e-08!102;UBERON:0000924!4.67e-08!102;UBERON:0006601!4.67e-08!102;UBERON:0000153!3.53e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.35e-59,10;UBERON:0000411,4.35e-59,10;UBERON:0001950,4.35e-59,10;UBERON:0002619,1.44e-34,17;UBERON:0000956,7.04e-28,21;UBERON:0001869,7.04e-28,21;UBERON:0000203,7.04e-28,21;UBERON:0003528,5.08e-20,29;UBERON:0002791,5.08e-20,29;UBERON:0001893,5.08e-20,29;UBERON:0002020,5.59e-17,34;UBERON:0002780,1.03e-14,39;UBERON:0001890,1.03e-14,39;UBERON:0006240,1.03e-14,39;UBERON:0003080,2.51e-14,40;UBERON:0002616,2.32e-12,46;UBERON:0000955,4.41e-12,47;UBERON:0006238,4.41e-12,47;UBERON:0003056,1.47e-11,49;UBERON:0001049,7.59e-11,52;UBERON:0005068,7.59e-11,52;UBERON:0006241,7.59e-11,52;UBERON:0007135,7.59e-11,52;UBERON:0000073,2.05e-10,54;UBERON:0002346,1.17e-08,64;UBERON:0003075,1.17e-08,64;UBERON:0007284,1.17e-08,64;UBERON:0001851,2.06e-08,1;UBERON:0005889,2.06e-08,1;UBERON:0010371,1.74e-07,73;UBERON:0001017,1.74e-07,73;UBERON:0001016,2.91e-07,75|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0,0.347648640384553,1.27857728665165,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,3.68260189205742,2.29158205375759,4.98374228796694,1.37016503954128,3.0215755895588,0.675022500231806,2.70192721934532,1.81256963593682,1.03552062350364,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0.476872379894642,0,0,0.0846146078916765,0,0,0.135804113845862,0,0.237270036248348,0,1.22769312950907,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr4:76523477..76523480,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:76523477..76523480,- | |||
|id=chr4:76523477..76523480,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!7.62e-30!10;UBERON:0000411!7.62e-30!10;UBERON:0001950!7.62e-30!10;UBERON:0002619!4.57e-20!17;UBERON:0000956!7.92e-19!21;UBERON:0001869!7.92e-19!21;UBERON:0000203!7.92e-19!21;UBERON:0003080!7.26e-16!40;UBERON:0002616!1.02e-15!49;UBERON:0000955!2.53e-15!50;UBERON:0006238!2.53e-15!50;UBERON:0002791!3.22e-15!29;UBERON:0003528!3.22e-15!29;UBERON:0001893!3.22e-15!29;UBERON:0002780!2.88e-14!39;UBERON:0001890!2.88e-14!39;UBERON:0006240!2.88e-14!39;UBERON:0003056!6.39e-14!49;UBERON:0001049!6.57e-13!52;UBERON:0005068!6.57e-13!52;UBERON:0006241!6.57e-13!52;UBERON:0007135!6.57e-13!52;UBERON:0000033!9.81e-13!63;UBERON:0002020!1.46e-12!34;UBERON:0002346!7.99e-11!71;UBERON:0003075!7.99e-11!71;UBERON:0007284!7.99e-11!71;UBERON:0001017!3.01e-09!73;UBERON:0005743!3.01e-09!73;UBERON:0000073!6.76e-09!75;UBERON:0001016!6.76e-09!75;UBERON:0007811!3.18e-08!86;UBERON:0004121!4.67e-08!102;UBERON:0000924!4.67e-08!102;UBERON:0006601!4.67e-08!102;UBERON:0000153!3.53e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.35e-59,10;UBERON:0000411,4.35e-59,10;UBERON:0001950,4.35e-59,10;UBERON:0002619,1.44e-34,17;UBERON:0000956,7.04e-28,21;UBERON:0001869,7.04e-28,21;UBERON:0000203,7.04e-28,21;UBERON:0003528,5.08e-20,29;UBERON:0002791,5.08e-20,29;UBERON:0001893,5.08e-20,29;UBERON:0002020,5.59e-17,34;UBERON:0002780,1.03e-14,39;UBERON:0001890,1.03e-14,39;UBERON:0006240,1.03e-14,39;UBERON:0003080,2.51e-14,40;UBERON:0002616,2.32e-12,46;UBERON:0000955,4.41e-12,47;UBERON:0006238,4.41e-12,47;UBERON:0003056,1.47e-11,49;UBERON:0001049,7.59e-11,52;UBERON:0005068,7.59e-11,52;UBERON:0006241,7.59e-11,52;UBERON:0007135,7.59e-11,52;UBERON:0000073,2.05e-10,54;UBERON:0002346,1.17e-08,64;UBERON:0003075,1.17e-08,64;UBERON:0007284,1.17e-08,64;UBERON:0001851,2.06e-08,1;UBERON:0005889,2.06e-08,1;UBERON:0010371,1.74e-07,73;UBERON:0001017,1.74e-07,73;UBERON:0001016,2.91e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0,0.347648640384553,1.27857728665165,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,3.68260189205742,2.29158205375759,4.98374228796694,1.37016503954128,3.0215755895588,0.675022500231806,2.70192721934532,1.81256963593682,1.03552062350364,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0.476872379894642,0,0,0.0846146078916765,0,0,0.135804113845862,0,0.237270036248348,0,1.22769312950907,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr4:76523477..76523480,- | |||
}} |
Revision as of 05:27, 14 September 2013
Short description: | p@chr4:76523477..76523480, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:76523477..76523480, - |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.35e-59 | 10 |
visual cortex | 4.35e-59 | 10 |
neocortex | 4.35e-59 | 10 |
regional part of cerebral cortex | 1.44e-34 | 17 |
cerebral cortex | 7.04e-28 | 21 |
cerebral hemisphere | 7.04e-28 | 21 |
pallium | 7.04e-28 | 21 |
brain grey matter | 5.08e-20 | 29 |
regional part of telencephalon | 5.08e-20 | 29 |
telencephalon | 5.08e-20 | 29 |
gray matter | 5.59e-17 | 34 |
regional part of forebrain | 1.03e-14 | 39 |
forebrain | 1.03e-14 | 39 |
future forebrain | 1.03e-14 | 39 |
anterior neural tube | 2.51e-14 | 40 |
regional part of brain | 2.32e-12 | 46 |
brain | 4.41e-12 | 47 |
future brain | 4.41e-12 | 47 |
pre-chordal neural plate | 1.47e-11 | 49 |
neural tube | 7.59e-11 | 52 |
neural rod | 7.59e-11 | 52 |
future spinal cord | 7.59e-11 | 52 |
neural keel | 7.59e-11 | 52 |
regional part of nervous system | 2.05e-10 | 54 |
neurectoderm | 1.17e-08 | 64 |
neural plate | 1.17e-08 | 64 |
presumptive neural plate | 1.17e-08 | 64 |
cortex | 2.06e-08 | 1 |
zygote cortex | 2.06e-08 | 1 |
ecto-epithelium | 1.74e-07 | 73 |
central nervous system | 1.74e-07 | 73 |
nervous system | 2.91e-07 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.