FFCP PHASE1:Hg19::chr9:100854838..100854851,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9830|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16283|TSSclassifier=S|UniProt=B7ZAZ9|association_with_transcript=0bp_to_ENST00000538344,uc011luz.1,uc011lva.1_5end|coexpression_cluster_id=C28|description=CAGE_peak_4_at_TRIM14_5end|id=chr9:100854838..100854851,-|ontology_enrichment_celltype=CL:0000625!1.61e-14!11;CL:0000791!1.54e-11!18;CL:0000789!1.54e-11!18;CL:0002420!1.54e-11!18;CL:0002419!1.54e-11!18;CL:0000790!1.54e-11!18;CL:0000084!1.55e-10!25;CL:0000827!1.55e-10!25;CL:0000784!5.48e-07!3|ontology_enrichment_celltype_v019=CL:0000625;2.51e-23;11!CL:0000084;1.42e-14;25!CL:0000791;2.97e-14;18!CL:0000789;2.97e-14;18!CL:0002419;2.97e-14;18|ontology_enrichment_celltype_v019_2=CL:0000625,3.57e-23,11;CL:0000084,1.70e-14,25;CL:0000827,1.70e-14,25;CL:0000791,3.67e-14,18;CL:0000789,3.67e-14,18;CL:0002420,3.67e-14,18;CL:0002419,3.67e-14,18;CL:0000790,3.67e-14,18;CL:0000838,9.15e-07,52|ontology_enrichment_development_v019=CL:0000790;2.97e-14;18!UBERON:0001045;1.13e-11;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!3.38e-14!15;UBERON:0000179!3.38e-14!15;UBERON:0000463!3.38e-14!15;UBERON:0004177!6.35e-11!7;UBERON:0007023!1.60e-07!115;UBERON:0002106!7.17e-07!3;UBERON:0004854!7.17e-07!3;UBERON:0009034!7.17e-07!3;UBERON:0002095!7.17e-07!3;UBERON:0004782!7.17e-07!3;UBERON:0003281!7.17e-07!3;UBERON:0009664!7.17e-07!3;UBERON:0002296!7.17e-07!3;UBERON:0005602!7.17e-07!3;UBERON:0001179!7.17e-07!3;UBERON:0006293!7.17e-07!3|ontology_enrichment_uberon_v019=UBERON:0002370;1.08e-22;2!UBERON:0005058;1.08e-22;2!UBERON:0009113;1.08e-22;2!UBERON:0001154;1.13e-11;1!UBERON:0001153;1.13e-11;1!UBERON:0009854;1.13e-11;1!UBERON:0004177;1.20e-09;5!UBERON:0005057;1.20e-09;5!UBERON:0002390;5.37e-07;32!UBERON:0000178;8.38e-07;15!UBERON:0000179;8.38e-07;15!UBERON:0000463;8.38e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0001154,6.97e-12,1;UBERON:0001153,6.97e-12,1;UBERON:0001045,6.97e-12,1;UBERON:0002370,7.78e-12,4;UBERON:0005058,7.78e-12,4;UBERON:0009113,7.78e-12,4;UBERON:0003295,7.78e-12,4;UBERON:0005562,7.78e-12,4;UBERON:0000974,2.74e-10,10;UBERON:0003351,3.51e-08,6;UBERON:0004177,3.96e-07,7;UBERON:0005057,3.96e-07,7;UBERON:0000178,7.97e-07,15;UBERON:0000179,7.97e-07,15;UBERON:0000463,7.97e-07,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0,20.8317034523283,0,0,0,25.9194656662837,0.270803863765016,3.45846563259323,0,0,0,0,0,0.535081656179426,0,0,0,0,0,1.27426165729639,0,0,1.35517607169996,1.15187950038977,1.24930726552346,1.65744076430812,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,1.71598473234038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52927441428475,1.70894156152249,0.952927101831156,0.411362273086194,0.648473311192717,2.16012574895246,0.79312517629427,0,0,0,0,0,6.40276590135727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93398740871803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375935671919414,0.644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0.250707539292375,0,0,0,0,0,2.61870874610114,9.81751429507293,50.3425932939408,0,0,0,0,0,0.606168477131288,0.0717222053926763,0,0,0,0,0,0,0,0,0,4.42802345900258,0|short_description=p4@TRIM14}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9830 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16283 | |||
|TSSclassifier=S | |||
|UniProt=B7ZAZ9 | |||
|association_with_transcript=0bp_to_ENST00000538344,uc011luz.1,uc011lva.1_5end | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_4_at_TRIM14_5end | |||
|id=chr9:100854838..100854851,- | |||
|ontology_enrichment_celltype=CL:0000625!1.61e-14!11;CL:0000791!1.54e-11!18;CL:0000789!1.54e-11!18;CL:0002420!1.54e-11!18;CL:0002419!1.54e-11!18;CL:0000790!1.54e-11!18;CL:0000084!1.55e-10!25;CL:0000827!1.55e-10!25;CL:0000784!5.48e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000625;2.51e-23;11!CL:0000084;1.42e-14;25!CL:0000791;2.97e-14;18!CL:0000789;2.97e-14;18!CL:0002419;2.97e-14;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,3.57e-23,11;CL:0000084,1.70e-14,25;CL:0000827,1.70e-14,25;CL:0000791,3.67e-14,18;CL:0000789,3.67e-14,18;CL:0002420,3.67e-14,18;CL:0002419,3.67e-14,18;CL:0000790,3.67e-14,18;CL:0000838,9.15e-07,52 | |||
|ontology_enrichment_development_v019=CL:0000790;2.97e-14;18!UBERON:0001045;1.13e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.38e-14!15;UBERON:0000179!3.38e-14!15;UBERON:0000463!3.38e-14!15;UBERON:0004177!6.35e-11!7;UBERON:0007023!1.60e-07!115;UBERON:0002106!7.17e-07!3;UBERON:0004854!7.17e-07!3;UBERON:0009034!7.17e-07!3;UBERON:0002095!7.17e-07!3;UBERON:0004782!7.17e-07!3;UBERON:0003281!7.17e-07!3;UBERON:0009664!7.17e-07!3;UBERON:0002296!7.17e-07!3;UBERON:0005602!7.17e-07!3;UBERON:0001179!7.17e-07!3;UBERON:0006293!7.17e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.08e-22;2!UBERON:0005058;1.08e-22;2!UBERON:0009113;1.08e-22;2!UBERON:0001154;1.13e-11;1!UBERON:0001153;1.13e-11;1!UBERON:0009854;1.13e-11;1!UBERON:0004177;1.20e-09;5!UBERON:0005057;1.20e-09;5!UBERON:0002390;5.37e-07;32!UBERON:0000178;8.38e-07;15!UBERON:0000179;8.38e-07;15!UBERON:0000463;8.38e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,6.97e-12,1;UBERON:0001153,6.97e-12,1;UBERON:0001045,6.97e-12,1;UBERON:0002370,7.78e-12,4;UBERON:0005058,7.78e-12,4;UBERON:0009113,7.78e-12,4;UBERON:0003295,7.78e-12,4;UBERON:0005562,7.78e-12,4;UBERON:0000974,2.74e-10,10;UBERON:0003351,3.51e-08,6;UBERON:0004177,3.96e-07,7;UBERON:0005057,3.96e-07,7;UBERON:0000178,7.97e-07,15;UBERON:0000179,7.97e-07,15;UBERON:0000463,7.97e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0,20.8317034523283,0,0,0,25.9194656662837,0.270803863765016,3.45846563259323,0,0,0,0,0,0.535081656179426,0,0,0,0,0,1.27426165729639,0,0,1.35517607169996,1.15187950038977,1.24930726552346,1.65744076430812,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,1.71598473234038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52927441428475,1.70894156152249,0.952927101831156,0.411362273086194,0.648473311192717,2.16012574895246,0.79312517629427,0,0,0,0,0,6.40276590135727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93398740871803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375935671919414,0.644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0.250707539292375,0,0,0,0,0,2.61870874610114,9.81751429507293,50.3425932939408,0,0,0,0,0,0.606168477131288,0.0717222053926763,0,0,0,0,0,0,0,0,0,4.42802345900258,0 | |||
|short_description=p4@TRIM14 | |||
}} |
Revision as of 06:36, 14 September 2013
Short description: | p4@TRIM14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_TRIM14_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 0bp_to_ENST00000538344, uc011luz.1, uc011lva.1_5end |
EntrezGene: | TRIM14 |
HGNC: | 16283 |
UniProt: | B7ZAZ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 3.57e-23 | 11 |
T cell | 1.70e-14 | 25 |
pro-T cell | 1.70e-14 | 25 |
mature alpha-beta T cell | 3.67e-14 | 18 |
alpha-beta T cell | 3.67e-14 | 18 |
immature T cell | 3.67e-14 | 18 |
mature T cell | 3.67e-14 | 18 |
immature alpha-beta T cell | 3.67e-14 | 18 |
lymphoid lineage restricted progenitor cell | 9.15e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 6.97e-12 | 1 |
caecum | 6.97e-12 | 1 |
midgut | 6.97e-12 | 1 |
thymus | 7.78e-12 | 4 |
hemolymphoid system gland | 7.78e-12 | 4 |
thymic region | 7.78e-12 | 4 |
pharyngeal gland | 7.78e-12 | 4 |
thymus primordium | 7.78e-12 | 4 |
neck | 2.74e-10 | 10 |
pharyngeal epithelium | 3.51e-08 | 6 |
hemopoietic organ | 3.96e-07 | 7 |
immune organ | 3.96e-07 | 7 |
blood | 7.97e-07 | 15 |
haemolymphatic fluid | 7.97e-07 | 15 |
organism substance | 7.97e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.