FFCP PHASE1:Hg19::chr9:130524452..130524471,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10044|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16884|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000464239_5end|coexpression_cluster_id=C2448|description=CAGE_peak_12_at_SH2D3C_5end|id=chr9:130524452..130524471,-|ontology_enrichment_celltype=CL:0000115!2.36e-23!35;CL:0002139!1.40e-21!24;CL:0000071!1.43e-20!18;CL:0002546!1.43e-20!18;CL:0002078!3.84e-17!44;CL:1000413!7.36e-13!9;CL:0000213!1.01e-11!57;CL:0000215!1.01e-11!57;CL:0002544!4.95e-08!6;CL:0002543!5.76e-08!6|ontology_enrichment_celltype_v019=CL:0000115;3.37e-15;36!CL:0002139;2.46e-13;24!CL:0002262;5.82e-12;2!CL:1000398;5.82e-12;2!CL:0002078;6.25e-11;45!CL:0000071;1.79e-10;18!CL:0002543;6.04e-09;6|ontology_enrichment_celltype_v019_2=CL:0000115,5.28e-19,36;CL:0002078,9.88e-15,45;CL:0002139,4.16e-13,24;CL:0002262,5.53e-12,2;CL:1000398,5.53e-12,2;CL:0000213,6.59e-11,58;CL:0000215,6.59e-11,58;CL:0000071,2.42e-10,18;CL:0002546,2.42e-10,18;CL:0002543,8.58e-09,6|ontology_enrichment_development_v019=UBERON:0005062;2.66e-13;4!UBERON:0007284;2.66e-13;4!UBERON:0004872;9.71e-13;7!CL:0002546;1.79e-10;18!UBERON:0004140;5.40e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;1.40e-12;2!DOID:178;5.40e-07;1!DOID:326;5.40e-07;1!DOID:3978;5.40e-07;1!DOID:3394;5.40e-07;1!DOID:5844;5.40e-07;1|ontology_enrichment_disease_v019_2=DOID:114,1.71e-12,2;DOID:178,6.60e-07,1;DOID:326,6.60e-07,1;DOID:3978,6.60e-07,1;DOID:3394,6.60e-07,1;DOID:5844,6.60e-07,1|ontology_enrichment_uberon=UBERON:0007023!4.98e-60!115;UBERON:0001986!1.43e-20!18;UBERON:0004638!1.43e-20!18;UBERON:0004852!1.43e-20!18;UBERON:0004111!1.03e-19!241;UBERON:0000025!9.71e-18!194;UBERON:0000477!1.10e-16!286;UBERON:0000487!4.71e-16!22;UBERON:0001049!6.35e-14!57;UBERON:0005068!6.35e-14!57;UBERON:0006241!6.35e-14!57;UBERON:0007135!6.35e-14!57;UBERON:0006914!1.26e-13!25;UBERON:0003915!7.36e-13!9;UBERON:0004700!7.36e-13!9;UBERON:0001917!7.36e-13!9;UBERON:0003080!5.94e-12!42;UBERON:0003075!9.76e-12!86;UBERON:0007284!9.76e-12!86;UBERON:0002616!6.20e-11!59;UBERON:0002346!7.34e-11!90;UBERON:0000055!7.59e-11!69;UBERON:0002780!8.42e-11!41;UBERON:0001890!8.42e-11!41;UBERON:0006240!8.42e-11!41;UBERON:0004872!1.20e-10!84;UBERON:0001981!7.58e-10!60;UBERON:0007500!7.58e-10!60;UBERON:0004537!7.58e-10!60;UBERON:0006965!7.58e-10!60;UBERON:0000483!1.26e-09!309;UBERON:0001893!1.39e-09!34;UBERON:0000119!2.22e-09!312;UBERON:0005743!2.95e-09!86;UBERON:0001869!3.75e-09!32;UBERON:0000955!4.01e-09!69;UBERON:0006238!4.01e-09!69;UBERON:0001017!4.15e-09!82;UBERON:0002791!9.05e-09!33;UBERON:0002049!1.25e-08!79;UBERON:0007798!1.25e-08!79;UBERON:0002020!1.85e-08!34;UBERON:0003528!1.85e-08!34;UBERON:0000467!2.66e-08!625;UBERON:0001009!2.79e-08!113;UBERON:0000480!3.00e-08!626;UBERON:0000468!3.39e-08!659;UBERON:0003103!7.85e-08!69;UBERON:0000073!9.63e-08!94;UBERON:0001016!9.63e-08!94;UBERON:0003056!1.19e-07!61;UBERON:0003978!1.96e-07!3;UBERON:0009751!1.96e-07!3;UBERON:0000946!1.96e-07!3;UBERON:0002523!1.96e-07!3;UBERON:0005983!1.96e-07!3;UBERON:0002165!1.96e-07!3;UBERON:0002062!1.96e-07!3;UBERON:0007280!1.96e-07!3;UBERON:0001638!2.69e-07!9;UBERON:0003920!2.69e-07!9;UBERON:0004582!2.69e-07!9;UBERON:0004151!4.47e-07!3|ontology_enrichment_uberon_v019=UBERON:0003978;1.47e-17;3!UBERON:0000946;1.47e-17;3!UBERON:0007100;3.02e-13;25!UBERON:0002133;1.21e-12;2!UBERON:0001281;5.82e-12;2!UBERON:0003497;5.82e-12;2!UBERON:0003909;5.82e-12;2!UBERON:0003835;5.82e-12;2!UBERON:0004638;1.79e-10;18!UBERON:0001986;1.79e-10;18!UBERON:0004852;1.79e-10;18!UBERON:0001638;5.32e-10;9!UBERON:0003920;5.32e-10;9!UBERON:0004582;5.32e-10;9!UBERON:0000487;1.83e-08;22!UBERON:0004151;2.32e-08;3!UBERON:0002106;2.94e-08;3!UBERON:0001280;2.94e-08;3!UBERON:0004647;2.94e-08;3!UBERON:0006914;2.24e-07;25!UBERON:0002171;3.12e-07;1!UBERON:0006518;3.12e-07;1!UBERON:0008949;3.12e-07;1!UBERON:0000101;3.12e-07;1!UBERON:0002167;3.12e-07;1!UBERON:0002135;3.72e-07;1!UBERON:0002134;3.72e-07;1!UBERON:0005208;3.72e-07;1!UBERON:0004145;3.72e-07;1!UBERON:0005946;3.72e-07;1!UBERON:0005965;3.72e-07;1!UBERON:0002078;3.72e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.08e-17,3;UBERON:0009751,1.08e-17,3;UBERON:0000946,1.08e-17,3;UBERON:0002523,1.08e-17,3;UBERON:0005983,1.08e-17,3;UBERON:0002165,1.08e-17,3;UBERON:0002062,1.08e-17,3;UBERON:0007280,1.08e-17,3;UBERON:0001009,1.71e-13,112;UBERON:0004872,2.15e-13,83;UBERON:0000055,1.15e-12,68;UBERON:0002133,1.22e-12,2;UBERON:0007100,2.85e-12,27;UBERON:0001281,5.53e-12,2;UBERON:0003497,5.53e-12,2;UBERON:0003909,5.53e-12,2;UBERON:0003835,5.53e-12,2;UBERON:0007023,9.51e-12,114;UBERON:0007500,6.08e-11,59;UBERON:0001981,6.08e-11,59;UBERON:0004537,6.08e-11,59;UBERON:0006965,6.08e-11,59;UBERON:0002049,1.12e-10,78;UBERON:0007798,1.12e-10,78;UBERON:0004638,2.42e-10,18;UBERON:0001986,2.42e-10,18;UBERON:0004852,2.42e-10,18;UBERON:0001638,8.23e-10,9;UBERON:0003920,8.23e-10,9;UBERON:0004582,8.23e-10,9;UBERON:0004535,2.46e-09,109;UBERON:0004151,1.52e-0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10044 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16884 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000464239_5end | |||
|coexpression_cluster_id=C2448 | |||
|description=CAGE_peak_12_at_SH2D3C_5end | |||
|id=chr9:130524452..130524471,- | |||
|ontology_enrichment_celltype=CL:0000115!2.36e-23!35;CL:0002139!1.40e-21!24;CL:0000071!1.43e-20!18;CL:0002546!1.43e-20!18;CL:0002078!3.84e-17!44;CL:1000413!7.36e-13!9;CL:0000213!1.01e-11!57;CL:0000215!1.01e-11!57;CL:0002544!4.95e-08!6;CL:0002543!5.76e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000115;3.37e-15;36!CL:0002139;2.46e-13;24!CL:0002262;5.82e-12;2!CL:1000398;5.82e-12;2!CL:0002078;6.25e-11;45!CL:0000071;1.79e-10;18!CL:0002543;6.04e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,5.28e-19,36;CL:0002078,9.88e-15,45;CL:0002139,4.16e-13,24;CL:0002262,5.53e-12,2;CL:1000398,5.53e-12,2;CL:0000213,6.59e-11,58;CL:0000215,6.59e-11,58;CL:0000071,2.42e-10,18;CL:0002546,2.42e-10,18;CL:0002543,8.58e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.66e-13;4!UBERON:0007284;2.66e-13;4!UBERON:0004872;9.71e-13;7!CL:0002546;1.79e-10;18!UBERON:0004140;5.40e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.40e-12;2!DOID:178;5.40e-07;1!DOID:326;5.40e-07;1!DOID:3978;5.40e-07;1!DOID:3394;5.40e-07;1!DOID:5844;5.40e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.71e-12,2;DOID:178,6.60e-07,1;DOID:326,6.60e-07,1;DOID:3978,6.60e-07,1;DOID:3394,6.60e-07,1;DOID:5844,6.60e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.98e-60!115;UBERON:0001986!1.43e-20!18;UBERON:0004638!1.43e-20!18;UBERON:0004852!1.43e-20!18;UBERON:0004111!1.03e-19!241;UBERON:0000025!9.71e-18!194;UBERON:0000477!1.10e-16!286;UBERON:0000487!4.71e-16!22;UBERON:0001049!6.35e-14!57;UBERON:0005068!6.35e-14!57;UBERON:0006241!6.35e-14!57;UBERON:0007135!6.35e-14!57;UBERON:0006914!1.26e-13!25;UBERON:0003915!7.36e-13!9;UBERON:0004700!7.36e-13!9;UBERON:0001917!7.36e-13!9;UBERON:0003080!5.94e-12!42;UBERON:0003075!9.76e-12!86;UBERON:0007284!9.76e-12!86;UBERON:0002616!6.20e-11!59;UBERON:0002346!7.34e-11!90;UBERON:0000055!7.59e-11!69;UBERON:0002780!8.42e-11!41;UBERON:0001890!8.42e-11!41;UBERON:0006240!8.42e-11!41;UBERON:0004872!1.20e-10!84;UBERON:0001981!7.58e-10!60;UBERON:0007500!7.58e-10!60;UBERON:0004537!7.58e-10!60;UBERON:0006965!7.58e-10!60;UBERON:0000483!1.26e-09!309;UBERON:0001893!1.39e-09!34;UBERON:0000119!2.22e-09!312;UBERON:0005743!2.95e-09!86;UBERON:0001869!3.75e-09!32;UBERON:0000955!4.01e-09!69;UBERON:0006238!4.01e-09!69;UBERON:0001017!4.15e-09!82;UBERON:0002791!9.05e-09!33;UBERON:0002049!1.25e-08!79;UBERON:0007798!1.25e-08!79;UBERON:0002020!1.85e-08!34;UBERON:0003528!1.85e-08!34;UBERON:0000467!2.66e-08!625;UBERON:0001009!2.79e-08!113;UBERON:0000480!3.00e-08!626;UBERON:0000468!3.39e-08!659;UBERON:0003103!7.85e-08!69;UBERON:0000073!9.63e-08!94;UBERON:0001016!9.63e-08!94;UBERON:0003056!1.19e-07!61;UBERON:0003978!1.96e-07!3;UBERON:0009751!1.96e-07!3;UBERON:0000946!1.96e-07!3;UBERON:0002523!1.96e-07!3;UBERON:0005983!1.96e-07!3;UBERON:0002165!1.96e-07!3;UBERON:0002062!1.96e-07!3;UBERON:0007280!1.96e-07!3;UBERON:0001638!2.69e-07!9;UBERON:0003920!2.69e-07!9;UBERON:0004582!2.69e-07!9;UBERON:0004151!4.47e-07!3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83370705696798,0,0,0,0,0,0,0,0,0.596287222100115,2.58070378531837,0.347140501607594,1.13061588384802,0.838998872419812,1.37559020970034,0.626984899610432,1.29208379584664,1.06729878806013,0.66944122552934,0.805658634218294,0,0.24406205754817,0.735326160691737,0,0.267899184852239,1.12264686313085,0.225222960966644,3.06633274931766,0,2.19842092716489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.340187410553031,0.431831832204279,1.54227252690289,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19762268907841,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,3.62499787717397,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.615602068030377,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.619202951523374,0.611030144933625,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,3.0721064139948,1.60412296808179,3.58936512288407,2.1964690054889,5.15071257763885,3.12440040418622,2.28423806454869,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.0607495566580247,0,0.788057072991982,0.681909645754975,0,0,0,0.714695326373367,1.98627591109629,0,0,0,0,0,0,0,0,0.293104467356165,0,0.258565912723101,0,0,0,1.60181118851542,2.20086027139532,4.97086866416635,0,0,0,0,0.544017803369474,1.2534494701135,0,0,0,0.886068179966986,0,0,0,0.221858103073705,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,1.41696576325585,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.135075169236789,0,0,0.380494861163441,0,0,1.98484471355718,0,0,0,0,1.82089681270989,0.227662191351298,0.975726071789027,0,0,0.40781839786099,0.263091094251396,0,0,0.549451649953598,0.314231179832004,0,0,0,0,0.857718530119876,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0.718639647993729,0,0,0,0,0,0,0,0,0.308696632431779,0.437119121007915,0,0.245148321753905,0,0,0.297046400327086,0.4226557275834,0,1.12780701575824,2.2560260790752,0,0,0,0,0,0,0,0,0.203974470572744,0.436350690340377,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.530450887527676,0,0,0.103432995861895,1.27940389140589,0.23806443146374,0.129177819672012,0,0,0.445530107947154,0,1.74173398317569,0.684466602170562,0.202056159043763,0.573777643141411,0,0,0,0,0,0,0.977931553462932,0,0.665756774185513,1.20764276154616,0 | |||
|short_description=p12@SH2D3C | |||
}} |
Revision as of 07:33, 14 September 2013
Short description: | p12@SH2D3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_SH2D3C_5end |
Coexpression cluster: | C2448_lung_heart_adipose_uterus_spleen_penis_diaphragm |
Association with transcript: | 0bp_to_ENST00000464239_5end |
EntrezGene: | SH2D3C |
HGNC: | 16884 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 5.28e-19 | 36 |
meso-epithelial cell | 9.88e-15 | 45 |
endothelial cell of vascular tree | 4.16e-13 | 24 |
endothelial cell of sinusoid | 5.53e-12 | 2 |
endothelial cell of hepatic sinusoid | 5.53e-12 | 2 |
lining cell | 6.59e-11 | 58 |
barrier cell | 6.59e-11 | 58 |
blood vessel endothelial cell | 2.42e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.42e-10 | 18 |
vein endothelial cell | 8.58e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.71e-12 | 2 |
vascular disease | 6.60e-07 | 1 |
ischemia | 6.60e-07 | 1 |
extrinsic cardiomyopathy | 6.60e-07 | 1 |
myocardial ischemia | 6.60e-07 | 1 |
myocardial infarction | 6.60e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.