FFCP PHASE1:Mm9::chr6:129183076..129183130,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=233|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:129183076..129183130,+|id=chr6:129183076..129183130,+|ontology_enrichment_celltype=CL:0000988!3.67e-11!32;CL:0002032!3.67e-11!32;CL:0000037!3.67e-11!32;CL:0000566!3.67e-11!32;CL:0000837!3.67e-11!32;CL:0002031!2.31e-09!25;CL:0000838!2.44e-09!12;CL:0000738!2.64e-09!17;CL:0002087!2.64e-09!17;CL:0000084!1.06e-08!11;CL:0000827!1.06e-08!11;CL:0002320!1.92e-08!46;CL:0000134!1.92e-08!46;CL:0000542!3.97e-08!13;CL:0000051!3.97e-08!13;CL:0000791!6.04e-08!9;CL:0000789!6.04e-08!9;CL:0002420!6.04e-08!9;CL:0002419!6.04e-08!9;CL:0000790!6.04e-08!9;CL:0000624!2.96e-07!8|ontology_enrichment_celltype_v019_2=CL:0000988,1.30e-19,32;CL:0002032,1.30e-19,32;CL:0000037,1.30e-19,32;CL:0000837,1.30e-19,32;CL:0000838,1.90e-17,12;CL:0002031,2.58e-16,25;CL:0000084,3.77e-16,11;CL:0000827,3.77e-16,11;CL:0000542,7.70e-16,13;CL:0000051,7.70e-16,13;CL:0000738,2.16e-15,17;CL:0002087,2.16e-15,17;CL:0000791,1.32e-14,9;CL:0000789,1.32e-14,9;CL:0002420,1.32e-14,9;CL:0002419,1.32e-14,9;CL:0000790,1.32e-14,9;CL:0002320,2.17e-14,46;CL:0000134,2.17e-14,46;CL:0000624,3.34e-13,8;CL:0000219,3.30e-11,54;CL:0000893,1.73e-10,6;CL:0002489,1.73e-10,6;CL:0000898,1.73e-10,6;CL:0000809,1.73e-10,6;CL:0000810,1.73e-10,6;CL:0000895,1.73e-10,6;CL:0000808,1.73e-10,6;CL:0000894,1.73e-10,6;CL:0000806,1.73e-10,6;CL:0000807,1.73e-10,6;CL:0000805,1.73e-10,6;CL:0002425,1.73e-10,6;CL:0002436,1.73e-10,6;CL:0002427,1.73e-10,6;CL:0002428,1.73e-10,6;CL:0002429,1.73e-10,6;CL:0002433,1.73e-10,6;CL:0002431,1.73e-10,6;CL:0002432,1.73e-10,6;CL:0000049,7.84e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!5.36e-16!48;UBERON:0002390!4.15e-14!45;UBERON:0003061!4.15e-14!45;UBERON:0002405!2.77e-10!70;UBERON:0003081!9.06e-10!88;UBERON:0004177!2.46e-09!29;UBERON:0002384!1.92e-08!46;UBERON:0002204!2.00e-07!32;UBERON:0001474!8.83e-07!22;UBERON:0004765!8.83e-07!22;UBERON:0001434!8.83e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.29e-20,48;UBERON:0002405,1.29e-20,48;UBERON:0002390,2.78e-17,45;UBERON:0003061,2.78e-17,45;UBERON:0002384,2.17e-14,46;UBERON:0004177,3.34e-12,29;UBERON:0005057,3.34e-12,29;UBERON:0000077,5.86e-12,35;UBERON:0003081,2.23e-08,87;UBERON:0002106,2.46e-08,6;UBERON:0004457,2.46e-08,6;UBERON:0000042,2.46e-08,6;UBERON:0004854,2.46e-08,6;UBERON:0009034,2.46e-08,6;UBERON:0002095,2.46e-08,6;UBERON:0004782,2.46e-08,6;UBERON:0003281,2.46e-08,6;UBERON:0009664,2.46e-08,6;UBERON:0002296,2.46e-08,6;UBERON:0005602,2.46e-08,6;UBERON:0001179,2.46e-08,6;UBERON:0006293,2.46e-08,6;UBERON:0003408,1.73e-07,24;UBERON:0002370,8.21e-07,23;UBERON:0000974,8.21e-07,23;UBERON:0004807,8.21e-07,23;UBERON:0005058,8.21e-07,23;UBERON:0003351,8.21e-07,23;UBERON:0009113,8.21e-07,23;UBERON:0003295,8.21e-07,23;UBERON:0009722,8.21e-07,23;UBERON:0005562,8.21e-07,23;UBERON:0007690,8.21e-07,23|phase1_expression=0.320297694209588,0.697950815278722,1.36499771816861,0,0,0.503637815735669,0.467225281191051,7.48915275961142,13.51571732656,12.6394844213876,9.24577028417727,9.81197555642638,9.0736386863539,9.9659258757657,0,2.22722794128809,0.699561878128147,3.78554598429885,3.83920414096069,2.54633791078818,0.0850432901510698,1.39007331681239,1.04479915655574,1.91990907352088,2.2940928106717,1.72269589234506,0.86152399231815,0.430942465371778,0.570070258369122,0.252030129759931,2.21730510655305,0,0,0,0,0.166234645358492,0,21.3451131675823,12.5013655123808,7.85285615960697,55.8819913629464,23.9065919735456,17.9638830621527,0.377690453926732,0.405507724878058,0.367093504323363,0,0,0,0,0,0,3.35565212115473,3.62681071005672,6.38578218370682,0,0,0,0,0,0,0,0,0.899899717281399,2.96659908770092,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.302904773332736,0,3.76823835312181,0,0,0,0,0,1.12355536105401,0.340860645156116,0.519572009205738,0.35333957451034,0,0,0,0,0,0,0,0.22836775943812,36.251303710604,0.148442139064825,0,0.608930956624282,0,0.301445281105245,0.23517741427141,0.251333182659351,0.247194967734374,0.86759614151947,3.5384422077995,0.323533699894818,1.98757366614354,0.969750506270444,0,0,0,1.53274233125155,1.67741174308288,1.19980546198682,1.39777249780371,0,0,0,0,0,0,0,0.101839363850316,1.7416975885413,0.252722758433675,0,0,0,0,0.30140963567143,0.0680364991513279,0,0,0,0,0,0,0,0.278047249225598,0,0,0,2.1066395619397,2.05878325691772,0.284163499395593,0,0,0,0,0,0,0.232533944750408,0,0,0,0.164167464079095,0.0810688095458557,0.584799949701329,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0.793351699990633,0,0,0,0,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0,0.864552199498777,0.398282546508734,0,0.114248512609729,0,0,0,0,0.316182685621286,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,1.2731292589071,1.15078454980324,0.972811360650212,0.274561413188081,2.87536413054709,0.744281895337007,0,0,0,0,2.40179147216586,0,0,0,0.234690248288502,0,0.714130922658041,0.195133647857799,0.472905432318573,0.221464689648775,0.478364305972461,1.80249646187312,0.863424909329478,1.15719246865209,6.03165135757089,1.08781136763742,0,0.275936746304732,0,0.234423373184406,0.327869890753351,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0.494910368917606,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0,0.23467170806371,0,1.7642271844397,0.98931751764888,0,0.180938774784468,0.119372344003136,0.164140899745061,0,0.18542530201051,4.44264290074417,1.44470807574256,2.96311243791539,1.50694765603753,1.91371918809435,2.74533807847827,1.35982743995084,0.69975726161829,1.38199973804424,0,0,0,0.216010681643603,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,1.16653475962614,1.24267862617385,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0.948033361884535,0,0.205421914329655,0.389762468933385,0.179026695667481,1.78813219303138,0.480781798079875,1.03382669022204,1.31256384932592,0.838274873204998,0.806609481094724,1.26695244961678,1.6356013078856,1.8700304349051,0.226730383615211,0.221985953374065,0.179427713218951,0.167884616364078,0.19318959403219,0.187682475451182,0.549454872801795,0.857473516316263,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0.505394423527595,0,0,0.0936415074698824,0.192075457214608,0.229741875822453,0.476293691283074,0,0,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.470546902076653,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.29551344712669,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0,0.220591419119515,0.927471342481686|short_description=p@chr6:129183076..129183130,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=233 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:129183076..129183130,+ | |||
|id=chr6:129183076..129183130,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.67e-11!32;CL:0002032!3.67e-11!32;CL:0000037!3.67e-11!32;CL:0000566!3.67e-11!32;CL:0000837!3.67e-11!32;CL:0002031!2.31e-09!25;CL:0000838!2.44e-09!12;CL:0000738!2.64e-09!17;CL:0002087!2.64e-09!17;CL:0000084!1.06e-08!11;CL:0000827!1.06e-08!11;CL:0002320!1.92e-08!46;CL:0000134!1.92e-08!46;CL:0000542!3.97e-08!13;CL:0000051!3.97e-08!13;CL:0000791!6.04e-08!9;CL:0000789!6.04e-08!9;CL:0002420!6.04e-08!9;CL:0002419!6.04e-08!9;CL:0000790!6.04e-08!9;CL:0000624!2.96e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.30e-19,32;CL:0002032,1.30e-19,32;CL:0000037,1.30e-19,32;CL:0000837,1.30e-19,32;CL:0000838,1.90e-17,12;CL:0002031,2.58e-16,25;CL:0000084,3.77e-16,11;CL:0000827,3.77e-16,11;CL:0000542,7.70e-16,13;CL:0000051,7.70e-16,13;CL:0000738,2.16e-15,17;CL:0002087,2.16e-15,17;CL:0000791,1.32e-14,9;CL:0000789,1.32e-14,9;CL:0002420,1.32e-14,9;CL:0002419,1.32e-14,9;CL:0000790,1.32e-14,9;CL:0002320,2.17e-14,46;CL:0000134,2.17e-14,46;CL:0000624,3.34e-13,8;CL:0000219,3.30e-11,54;CL:0000893,1.73e-10,6;CL:0002489,1.73e-10,6;CL:0000898,1.73e-10,6;CL:0000809,1.73e-10,6;CL:0000810,1.73e-10,6;CL:0000895,1.73e-10,6;CL:0000808,1.73e-10,6;CL:0000894,1.73e-10,6;CL:0000806,1.73e-10,6;CL:0000807,1.73e-10,6;CL:0000805,1.73e-10,6;CL:0002425,1.73e-10,6;CL:0002436,1.73e-10,6;CL:0002427,1.73e-10,6;CL:0002428,1.73e-10,6;CL:0002429,1.73e-10,6;CL:0002433,1.73e-10,6;CL:0002431,1.73e-10,6;CL:0002432,1.73e-10,6;CL:0000049,7.84e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.36e-16!48;UBERON:0002390!4.15e-14!45;UBERON:0003061!4.15e-14!45;UBERON:0002405!2.77e-10!70;UBERON:0003081!9.06e-10!88;UBERON:0004177!2.46e-09!29;UBERON:0002384!1.92e-08!46;UBERON:0002204!2.00e-07!32;UBERON:0001474!8.83e-07!22;UBERON:0004765!8.83e-07!22;UBERON:0001434!8.83e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.29e-20,48;UBERON:0002405,1.29e-20,48;UBERON:0002390,2.78e-17,45;UBERON:0003061,2.78e-17,45;UBERON:0002384,2.17e-14,46;UBERON:0004177,3.34e-12,29;UBERON:0005057,3.34e-12,29;UBERON:0000077,5.86e-12,35;UBERON:0003081,2.23e-08,87;UBERON:0002106,2.46e-08,6;UBERON:0004457,2.46e-08,6;UBERON:0000042,2.46e-08,6;UBERON:0004854,2.46e-08,6;UBERON:0009034,2.46e-08,6;UBERON:0002095,2.46e-08,6;UBERON:0004782,2.46e-08,6;UBERON:0003281,2.46e-08,6;UBERON:0009664,2.46e-08,6;UBERON:0002296,2.46e-08,6;UBERON:0005602,2.46e-08,6;UBERON:0001179,2.46e-08,6;UBERON:0006293,2.46e-08,6;UBERON:0003408,1.73e-07,24;UBERON:0002370,8.21e-07,23;UBERON:0000974,8.21e-07,23;UBERON:0004807,8.21e-07,23;UBERON:0005058,8.21e-07,23;UBERON:0003351,8.21e-07,23;UBERON:0009113,8.21e-07,23;UBERON:0003295,8.21e-07,23;UBERON:0009722,8.21e-07,23;UBERON:0005562,8.21e-07,23;UBERON:0007690,8.21e-07,23 | |||
|phase1_expression=0.320297694209588,0.697950815278722,1.36499771816861,0,0,0.503637815735669,0.467225281191051,7.48915275961142,13.51571732656,12.6394844213876,9.24577028417727,9.81197555642638,9.0736386863539,9.9659258757657,0,2.22722794128809,0.699561878128147,3.78554598429885,3.83920414096069,2.54633791078818,0.0850432901510698,1.39007331681239,1.04479915655574,1.91990907352088,2.2940928106717,1.72269589234506,0.86152399231815,0.430942465371778,0.570070258369122,0.252030129759931,2.21730510655305,0,0,0,0,0.166234645358492,0,21.3451131675823,12.5013655123808,7.85285615960697,55.8819913629464,23.9065919735456,17.9638830621527,0.377690453926732,0.405507724878058,0.367093504323363,0,0,0,0,0,0,3.35565212115473,3.62681071005672,6.38578218370682,0,0,0,0,0,0,0,0,0.899899717281399,2.96659908770092,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.302904773332736,0,3.76823835312181,0,0,0,0,0,1.12355536105401,0.340860645156116,0.519572009205738,0.35333957451034,0,0,0,0,0,0,0,0.22836775943812,36.251303710604,0.148442139064825,0,0.608930956624282,0,0.301445281105245,0.23517741427141,0.251333182659351,0.247194967734374,0.86759614151947,3.5384422077995,0.323533699894818,1.98757366614354,0.969750506270444,0,0,0,1.53274233125155,1.67741174308288,1.19980546198682,1.39777249780371,0,0,0,0,0,0,0,0.101839363850316,1.7416975885413,0.252722758433675,0,0,0,0,0.30140963567143,0.0680364991513279,0,0,0,0,0,0,0,0.278047249225598,0,0,0,2.1066395619397,2.05878325691772,0.284163499395593,0,0,0,0,0,0,0.232533944750408,0,0,0,0.164167464079095,0.0810688095458557,0.584799949701329,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0.793351699990633,0,0,0,0,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0,0.864552199498777,0.398282546508734,0,0.114248512609729,0,0,0,0,0.316182685621286,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,1.2731292589071,1.15078454980324,0.972811360650212,0.274561413188081,2.87536413054709,0.744281895337007,0,0,0,0,2.40179147216586,0,0,0,0.234690248288502,0,0.714130922658041,0.195133647857799,0.472905432318573,0.221464689648775,0.478364305972461,1.80249646187312,0.863424909329478,1.15719246865209,6.03165135757089,1.08781136763742,0,0.275936746304732,0,0.234423373184406,0.327869890753351,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0.494910368917606,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0,0.23467170806371,0,1.7642271844397,0.98931751764888,0,0.180938774784468,0.119372344003136,0.164140899745061,0,0.18542530201051,4.44264290074417,1.44470807574256,2.96311243791539,1.50694765603753,1.91371918809435,2.74533807847827,1.35982743995084,0.69975726161829,1.38199973804424,0,0,0,0.216010681643603,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,1.16653475962614,1.24267862617385,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0.948033361884535,0,0.205421914329655,0.389762468933385,0.179026695667481,1.78813219303138,0.480781798079875,1.03382669022204,1.31256384932592,0.838274873204998,0.806609481094724,1.26695244961678,1.6356013078856,1.8700304349051,0.226730383615211,0.221985953374065,0.179427713218951,0.167884616364078,0.19318959403219,0.187682475451182,0.549454872801795,0.857473516316263,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0.505394423527595,0,0,0.0936415074698824,0.192075457214608,0.229741875822453,0.476293691283074,0,0,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.470546902076653,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.29551344712669,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0,0.220591419119515,0.927471342481686 | |||
|short_description=p@chr6:129183076..129183130,+ | |||
}} |
Revision as of 09:04, 14 September 2013
Short description: | p@chr6:129183076..129183130, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:129183076..129183130, + |
Coexpression cluster: | MCL_coexpression_mm9:233 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.29e-20 | 48 |
immune system | 1.29e-20 | 48 |
hematopoietic system | 2.78e-17 | 45 |
blood island | 2.78e-17 | 45 |
connective tissue | 2.17e-14 | 46 |
hemopoietic organ | 3.34e-12 | 29 |
immune organ | 3.34e-12 | 29 |
mixed endoderm/mesoderm-derived structure | 5.86e-12 | 35 |
lateral plate mesoderm | 2.23e-08 | 87 |
spleen | 2.46e-08 | 6 |
cavity lining | 2.46e-08 | 6 |
serous membrane | 2.46e-08 | 6 |
gastrointestinal system mesentery | 2.46e-08 | 6 |
stomach region | 2.46e-08 | 6 |
mesentery | 2.46e-08 | 6 |
gastrointestinal system serosa | 2.46e-08 | 6 |
mesentery of stomach | 2.46e-08 | 6 |
gut mesentery | 2.46e-08 | 6 |
dorsal mesentery | 2.46e-08 | 6 |
dorsal mesogastrium | 2.46e-08 | 6 |
peritoneal cavity | 2.46e-08 | 6 |
spleen primordium | 2.46e-08 | 6 |
gland of gut | 1.73e-07 | 24 |
thymus | 8.21e-07 | 23 |
neck | 8.21e-07 | 23 |
respiratory system epithelium | 8.21e-07 | 23 |
hemolymphoid system gland | 8.21e-07 | 23 |
pharyngeal epithelium | 8.21e-07 | 23 |
thymic region | 8.21e-07 | 23 |
pharyngeal gland | 8.21e-07 | 23 |
entire pharyngeal arch endoderm | 8.21e-07 | 23 |
thymus primordium | 8.21e-07 | 23 |
early pharyngeal endoderm | 8.21e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.