FFCP PHASE1:Mm9::chr8:112229540..112229566,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=75871|HGNC=|MCL_coexpression_id=335|UniProt=Q6PD05|association_with_transcript=91bp_to_ENSMUST00000034163,NM_001167946,NR_030772,NR_030773,uc009njc.2,uc009njd.2,uc009nje.2_5end|description=CAGE_peak_2_at_Zfp821_5end|id=chr8:112229540..112229566,+|ontology_enrichment_celltype=CL:0000540!1.53e-13!33;CL:0000047!1.53e-13!33;CL:0000031!1.53e-13!33;CL:0000404!1.53e-13!33;CL:0000117!3.03e-13!23;CL:0000337!3.03e-13!23;CL:0000221!3.65e-11!44;CL:0000133!3.65e-11!44;CL:0002319!7.53e-11!43;CL:0000393!2.69e-10!39;CL:0000211!2.69e-10!39;CL:0000055!7.23e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.69e-14,23;CL:0000337,1.69e-14,23;CL:0000540,2.09e-14,33;CL:0000047,2.09e-14,33;CL:0000031,2.09e-14,33;CL:0000404,2.09e-14,33;CL:0000221,1.93e-11,44;CL:0000133,1.93e-11,44;CL:0000393,3.35e-11,39;CL:0000211,3.35e-11,39;CL:0002319,4.25e-11,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.78e-19!73;UBERON:0005743!1.78e-19!73;UBERON:0000073!1.37e-18!75;UBERON:0001016!1.37e-18!75;UBERON:0004121!3.02e-17!102;UBERON:0000924!3.02e-17!102;UBERON:0006601!3.02e-17!102;UBERON:0001049!2.46e-16!52;UBERON:0005068!2.46e-16!52;UBERON:0006241!2.46e-16!52;UBERON:0007135!2.46e-16!52;UBERON:0002346!2.20e-15!71;UBERON:0003075!2.20e-15!71;UBERON:0007284!2.20e-15!71;UBERON:0000033!2.66e-15!63;UBERON:0000955!3.92e-15!50;UBERON:0006238!3.92e-15!50;UBERON:0002020!4.12e-15!34;UBERON:0003056!5.10e-15!49;UBERON:0002616!7.10e-15!49;UBERON:0002780!1.45e-14!39;UBERON:0001890!1.45e-14!39;UBERON:0006240!1.45e-14!39;UBERON:0003080!2.30e-14!40;UBERON:0002791!2.72e-12!29;UBERON:0003528!2.72e-12!29;UBERON:0001893!2.72e-12!29;UBERON:0000153!6.96e-09!94;UBERON:0000956!1.11e-08!21;UBERON:0001869!1.11e-08!21;UBERON:0000203!1.11e-08!21;UBERON:0007811!6.66e-08!86;UBERON:0002619!4.71e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.34e-19,73;UBERON:0001016,7.61e-19,75;UBERON:0004121,9.75e-19,95;UBERON:0000924,9.75e-19,95;UBERON:0006601,9.75e-19,95;UBERON:0002346,3.81e-18,64;UBERON:0003075,3.81e-18,64;UBERON:0007284,3.81e-18,64;UBERON:0000073,7.86e-18,54;UBERON:0010371,1.53e-17,73;UBERON:0001049,1.77e-16,52;UBERON:0005068,1.77e-16,52;UBERON:0006241,1.77e-16,52;UBERON:0007135,1.77e-16,52;UBERON:0002020,1.06e-15,34;UBERON:0003056,1.49e-15,49;UBERON:0002780,7.60e-15,39;UBERON:0001890,7.60e-15,39;UBERON:0006240,7.60e-15,39;UBERON:0003080,1.20e-14,40;UBERON:0000955,1.67e-14,47;UBERON:0006238,1.67e-14,47;UBERON:0002616,3.18e-14,46;UBERON:0003528,1.29e-12,29;UBERON:0002791,1.29e-12,29;UBERON:0001893,1.29e-12,29;UBERON:0010314,9.07e-12,92;UBERON:0000956,1.16e-08,21;UBERON:0001869,1.16e-08,21;UBERON:0000203,1.16e-08,21;UBERON:0002619,6.90e-07,17|phase1_expression=1.76163731815273,0,0.454999239389536,0.30246421130683,1.00179145989269,0.16787927191189,0.233612640595526,0.903863264091034,0.140788722151667,0.70219357896598,0,0.0797721589953364,0,0.174840804837995,1.33243904726265,1.01237633694913,1.39912375625629,1.10411757875383,0.959801035240171,4.2438965179803,3.06155844543851,0.695036658406197,0.522399578277871,0.639969691173627,0.45881856213434,1.14846392823004,0.430761996159075,1.29282739611533,0.950117097281869,0.252030129759931,0.443461021310609,3.17515336729816,1.84519436275371,0,0.866554859253824,0.332469290716985,0.816677425049476,0.837063261473815,0,0,1.17646297606203,0.683045484958446,0,0.251793635951155,1.01376931219515,0.367093504323363,0.782391344348039,2.39827672018491,0.878744730937887,1.36100929351998,0.979904951377538,0,1.51004345451963,0.725362142011344,0.336093799142464,1.28629718017973,0.573066879877513,1.03134418455488,8.09265843438391,8.99284664762456,6.33831403506179,0,0,1.3498495759221,0,0.7104801149461,1.79760066311043,1.53687322128622,5.08079100311541,10.6654691282036,8.62332341540666,4.57041575046086,3.09215957332259,6.61450315760752,11.0222291670972,11.0306254393203,2.20231761998777,1.27687338085188,1.84327839907492,7.64940468835124,12.2593442427229,10.4182674111352,2.23346399201105,3.93933827022176,2.13917546887534,7.36571463684169,2.84743361598206,9.69277118291563,1.21161909333094,0.302286240427142,2.02905142091174,0,0.679971333707751,0.539703191637817,0,0,0.842666520790511,1.36344258062446,1.81850203222008,0.70667914902068,2.11265129665021,0,0,7.11066703153331,1.29894624606728,0.253359865475099,2.02209778005913,1.1418387971906,0.258937883647172,0.593768556259299,1.21439728736295,1.52232739156071,0.230615497256059,1.20578112442098,0.705532242814229,0.753999547978053,1.48316980640624,0.433798070759735,0.884610551949874,0.647067399789637,1.10420759230197,1.45462575940567,0,2.34224637609238,1.8850203613211,0.255457055208591,0.479260498023681,0.599902730993408,0.508280908292259,1.19832511523858,1.37250180845588,5.02617408451458,1.21677024134594,2.04572365864264,1.24672826735736,1.62241263067758,2.03678727700633,0.746441823660558,0.758168275301024,0.420883711772948,2.86264974517948,2.06911893990126,0.540186389416048,2.26057226753573,2.4493139694478,2.43416068541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| ||
|EntrezGene=75871 | |||
|HGNC= | |||
|MCL_coexpression_id=335 | |||
|UniProt=Q6PD05 | |||
|association_with_transcript=91bp_to_ENSMUST00000034163,NM_001167946,NR_030772,NR_030773,uc009njc.2,uc009njd.2,uc009nje.2_5end | |||
|description=CAGE_peak_2_at_Zfp821_5end | |||
|id=chr8:112229540..112229566,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.53e-13!33;CL:0000047!1.53e-13!33;CL:0000031!1.53e-13!33;CL:0000404!1.53e-13!33;CL:0000117!3.03e-13!23;CL:0000337!3.03e-13!23;CL:0000221!3.65e-11!44;CL:0000133!3.65e-11!44;CL:0002319!7.53e-11!43;CL:0000393!2.69e-10!39;CL:0000211!2.69e-10!39;CL:0000055!7.23e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.69e-14,23;CL:0000337,1.69e-14,23;CL:0000540,2.09e-14,33;CL:0000047,2.09e-14,33;CL:0000031,2.09e-14,33;CL:0000404,2.09e-14,33;CL:0000221,1.93e-11,44;CL:0000133,1.93e-11,44;CL:0000393,3.35e-11,39;CL:0000211,3.35e-11,39;CL:0002319,4.25e-11,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.78e-19!73;UBERON:0005743!1.78e-19!73;UBERON:0000073!1.37e-18!75;UBERON:0001016!1.37e-18!75;UBERON:0004121!3.02e-17!102;UBERON:0000924!3.02e-17!102;UBERON:0006601!3.02e-17!102;UBERON:0001049!2.46e-16!52;UBERON:0005068!2.46e-16!52;UBERON:0006241!2.46e-16!52;UBERON:0007135!2.46e-16!52;UBERON:0002346!2.20e-15!71;UBERON:0003075!2.20e-15!71;UBERON:0007284!2.20e-15!71;UBERON:0000033!2.66e-15!63;UBERON:0000955!3.92e-15!50;UBERON:0006238!3.92e-15!50;UBERON:0002020!4.12e-15!34;UBERON:0003056!5.10e-15!49;UBERON:0002616!7.10e-15!49;UBERON:0002780!1.45e-14!39;UBERON:0001890!1.45e-14!39;UBERON:0006240!1.45e-14!39;UBERON:0003080!2.30e-14!40;UBERON:0002791!2.72e-12!29;UBERON:0003528!2.72e-12!29;UBERON:0001893!2.72e-12!29;UBERON:0000153!6.96e-09!94;UBERON:0000956!1.11e-08!21;UBERON:0001869!1.11e-08!21;UBERON:0000203!1.11e-08!21;UBERON:0007811!6.66e-08!86;UBERON:0002619!4.71e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.34e-19,73;UBERON:0001016,7.61e-19,75;UBERON:0004121,9.75e-19,95;UBERON:0000924,9.75e-19,95;UBERON:0006601,9.75e-19,95;UBERON:0002346,3.81e-18,64;UBERON:0003075,3.81e-18,64;UBERON:0007284,3.81e-18,64;UBERON:0000073,7.86e-18,54;UBERON:0010371,1.53e-17,73;UBERON:0001049,1.77e-16,52;UBERON:0005068,1.77e-16,52;UBERON:0006241,1.77e-16,52;UBERON:0007135,1.77e-16,52;UBERON:0002020,1.06e-15,34;UBERON:0003056,1.49e-15,49;UBERON:0002780,7.60e-15,39;UBERON:0001890,7.60e-15,39;UBERON:0006240,7.60e-15,39;UBERON:0003080,1.20e-14,40;UBERON:0000955,1.67e-14,47;UBERON:0006238,1.67e-14,47;UBERON:0002616,3.18e-14,46;UBERON:0003528,1.29e-12,29;UBERON:0002791,1.29e-12,29;UBERON:0001893,1.29e-12,29;UBERON:0010314,9.07e-12,92;UBERON:0000956,1.16e-08,21;UBERON:0001869,1.16e-08,21;UBERON:0000203,1.16e-08,21;UBERON:0002619,6.90e-07,17 | |||
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| |||
|short_description=p2@Zfp821 | |||
}} |
Revision as of 14:43, 14 September 2013
Short description: | p2@Zfp821 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Zfp821_5end |
Coexpression cluster: | MCL_coexpression_mm9:335 |
Association with transcript: | 91bp_to_ENSMUST00000034163, NM_001167946, NR_030772, NR_030773, uc009njc.2, uc009njd.2, uc009nje.2_5end |
EntrezGene: | Zfp821 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.69e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.69e-14 | 23 |
neuron | 2.09e-14 | 33 |
neuronal stem cell | 2.09e-14 | 33 |
neuroblast | 2.09e-14 | 33 |
electrically signaling cell | 2.09e-14 | 33 |
ectodermal cell | 1.93e-11 | 44 |
neurectodermal cell | 1.93e-11 | 44 |
electrically responsive cell | 3.35e-11 | 39 |
electrically active cell | 3.35e-11 | 39 |
neural cell | 4.25e-11 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.34e-19 | 73 |
nervous system | 7.61e-19 | 75 |
ectoderm-derived structure | 9.75e-19 | 95 |
ectoderm | 9.75e-19 | 95 |
presumptive ectoderm | 9.75e-19 | 95 |
neurectoderm | 3.81e-18 | 64 |
neural plate | 3.81e-18 | 64 |
presumptive neural plate | 3.81e-18 | 64 |
regional part of nervous system | 7.86e-18 | 54 |
ecto-epithelium | 1.53e-17 | 73 |
neural tube | 1.77e-16 | 52 |
neural rod | 1.77e-16 | 52 |
future spinal cord | 1.77e-16 | 52 |
neural keel | 1.77e-16 | 52 |
gray matter | 1.06e-15 | 34 |
pre-chordal neural plate | 1.49e-15 | 49 |
regional part of forebrain | 7.60e-15 | 39 |
forebrain | 7.60e-15 | 39 |
future forebrain | 7.60e-15 | 39 |
anterior neural tube | 1.20e-14 | 40 |
brain | 1.67e-14 | 47 |
future brain | 1.67e-14 | 47 |
regional part of brain | 3.18e-14 | 46 |
brain grey matter | 1.29e-12 | 29 |
regional part of telencephalon | 1.29e-12 | 29 |
telencephalon | 1.29e-12 | 29 |
structure with developmental contribution from neural crest | 9.07e-12 | 92 |
cerebral cortex | 1.16e-08 | 21 |
cerebral hemisphere | 1.16e-08 | 21 |
pallium | 1.16e-08 | 21 |
regional part of cerebral cortex | 6.90e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.