FFCP PHASE1:Hg19::chr1:36789257..36789268,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55194 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25558 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-41bp_to_ENST00000490466_5end | |||
|coexpression_cluster_id=C1437 | |||
|description=CAGE_peak_2_at_FAM176B_5end | |||
|id=chr1:36789257..36789268,- | |||
|ontology_enrichment_celltype=CL:0000055!3.91e-32!180;CL:0000183!4.22e-18!59;CL:0000222!7.95e-18!119;CL:0000680!2.62e-16!57;CL:0000056!2.62e-16!57;CL:0000355!2.62e-16!57;CL:0000187!1.46e-15!54;CL:0002371!6.44e-15!591;CL:0000144!1.12e-14!625;CL:0000393!5.83e-14!60;CL:0000211!5.83e-14!60;CL:0000057!3.38e-13!75;CL:0000192!3.86e-13!42;CL:0000514!3.86e-13!42;CL:0000359!1.50e-10!32;CL:0000220!2.53e-09!246;CL:0002321!4.76e-09!248;CL:0000548!9.43e-09!679;CL:0000004!9.43e-09!679;CL:0000255!9.43e-09!679;CL:0000012!1.47e-08!682;CL:0000048!3.61e-08!430;CL:0000499!2.83e-07!27;CL:0000723!3.28e-07!436;CL:0000034!9.36e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000192;5.23e-10;43!CL:0000359;1.05e-09;32!CL:0000187;1.90e-09;55!CL:0000393;7.18e-09;61!CL:0000211;7.18e-09;61!CL:0000499;3.40e-08;28!CL:0000327;2.20e-07;15!CL:0002334;3.08e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.03e-18,58;CL:0000056,2.03e-18,58;CL:0000355,2.03e-18,58;CL:0000187,2.69e-17,55;CL:0000393,5.21e-15,61;CL:0000211,5.21e-15,61;CL:0000222,5.37e-15,121;CL:0000048,2.05e-14,427;CL:0000192,3.01e-14,43;CL:0000514,3.01e-14,43;CL:0000057,6.22e-14,76;CL:0000723,1.36e-13,433;CL:0000034,1.52e-12,441;CL:0000359,1.76e-10,32;CL:0000499,1.64e-08,28;CL:0002334,1.56e-07,12;CL:0000327,2.40e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;5.23e-10;43!CL:0000355;6.62e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.34e-19!83;UBERON:0002329!4.34e-19!83;UBERON:0003077!4.34e-19!83;UBERON:0003059!4.34e-19!83;UBERON:0007282!4.34e-19!83;UBERON:0009618!4.34e-19!83;UBERON:0007285!4.34e-19!83;UBERON:0004290!8.91e-19!70;UBERON:0000486!4.13e-18!82;UBERON:0005256!2.37e-17!143;UBERON:0001134!4.53e-16!61;UBERON:0002036!4.53e-16!61;UBERON:0003082!4.53e-16!61;UBERON:0002385!1.51e-15!63;UBERON:0001015!1.51e-15!63;UBERON:0000383!1.51e-15!63;UBERON:0004872!6.35e-13!84;UBERON:0002100!2.89e-12!216;UBERON:0002049!2.58e-11!79;UBERON:0007798!2.58e-11!79;UBERON:0003914!2.75e-11!118;UBERON:0001981!1.48e-10!60;UBERON:0007500!1.48e-10!60;UBERON:0004537!1.48e-10!60;UBERON:0006965!1.48e-10!60;UBERON:0001637!2.15e-10!42;UBERON:0003509!2.15e-10!42;UBERON:0004572!2.15e-10!42;UBERON:0000926!1.54e-09!448;UBERON:0004120!1.54e-09!448;UBERON:0006603!1.54e-09!448;UBERON:0000055!1.72e-09!69;UBERON:0000490!3.12e-09!138;UBERON:0004535!6.68e-09!110;UBERON:0001009!2.63e-08!113;UBERON:0004573!1.23e-07!33;UBERON:0004571!1.23e-07!33;UBERON:0002204!4.72e-07!167;UBERON:0000119!8.52e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;6.73e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,7.11e-25,78;UBERON:0007524,4.49e-22,73;UBERON:0002329,6.74e-22,71;UBERON:0003059,6.74e-22,71;UBERON:0007282,6.74e-22,71;UBERON:0004290,6.74e-22,71;UBERON:0009618,6.74e-22,71;UBERON:0003077,2.48e-21,72;UBERON:0007285,2.48e-21,72;UBERON:0001134,1.46e-18,62;UBERON:0002036,1.46e-18,62;UBERON:0003082,1.46e-18,62;UBERON:0000486,2.79e-18,83;UBERON:0002385,1.76e-17,64;UBERON:0001015,1.76e-17,64;UBERON:0000383,1.76e-17,64;UBERON:0003104,7.41e-17,160;UBERON:0009142,7.41e-17,160;UBERON:0005256,4.37e-16,122;UBERON:0000926,1.14e-13,315;UBERON:0004120,1.14e-13,315;UBERON:0006603,1.14e-13,315;UBERON:0004872,1.25e-11,83;UBERON:0002100,1.33e-10,199;UBERON:0000490,2.95e-10,148;UBERON:0003914,2.97e-09,117;UBERON:0001637,4.48e-09,42;UBERON:0003509,4.48e-09,42;UBERON:0004572,4.48e-09,42;UBERON:0002204,8.05e-09,167;UBERON:0007500,2.11e-08,59;UBERON:0001981,2.11e-08,59;UBERON:0004537,2.11e-08,59;UBERON:0006965,2.11e-08,59;UBERON:0002049,7.94e-08,78;UBERON:0007798,7.94e-08,78;UBERON:0003124,1.58e-07,7;UBERON:0000055,8.59e-07,68;UBERON:0004535,9.55e-07,109 | |||
|phase1_expression=1.63510541343501,1.71280419112787,1.9733616573436,1.0007329835313,0.446961094427288,0.872338524100369,0,1.26343974685366,2.87304191019822,0.491467873003018,2.79120467188971,0.873765488520689,1.84636884759917,2.22779435328084,3.31397375727916,0.672325146451775,1.20538905604795,0.730310090387373,0.975865597581014,1.23121058076788,4.08001382488506,1.25381888591235,0.286235987131057,0.821246550437305,1.12988375635323,0,0.0821005894499457,0,0,0,0,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0.880801318004542,0,0.401088894940283,0,2.01523926815932,0.32389366601898,1.28787783817093,0.726991193897824,0.377875943688809,0.727752183563449,0.464858073811369,0.411167888021826,0.619412741790207,0,0.256160706529101,0,0.344745680736619,0,1.35426486594342,0.376484679085209,0,0.224723484445085,0.612167784741805,0,0,0,0.598390972864896,0,0,0,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0,0.316462387440884,0.211255286311942,0.212604299965044,0.209658645508376,0.112328631146495,0.750884464207532,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0.196709770113833,0,0,0.501559486172034,0.651844533267181,0,0,1.22551502573691,0.294605907474837,0.221533894583621,0,1.15282187753108,1.56071217071854,0.986627427622057,1.38175008892924,1.15921234294021,0,0,0,0.453237370790265,0,0,0,0,0,0,0.451725357233318,0,0,0.236777252044017,0.821127996921047,0,0,0.144824403882799,2.43806866313962,2.68280343881454,0.511450247374121,1.80719576192283,2.50668955317945,2.31754430337318,0.795285947051099,1.94653948121054,0.850813354476611,0.443458794925128,0.527008714158756,0.458426764241994,0,0.370784442784429,0.324547393654683,0.348259474598534,0.531831842075461,0,0,0,0.993812036833525,0.860234595106124,0.347140501607594,1.13061588384802,0.838998872419812,2.20094433552054,0.835979866147242,0.775250277507987,0,0,1.20848795132744,1.52054421143703,1.22031028774085,0,1.62028389576352,0.17859945656816,0.673588117878509,0.225222960966644,1.53316637465883,3.79706263827252,0.732806975721629,3.9534125230819,0,0,0.496971951695318,1.51956613997496,0.264818361626438,0.860509862246441,1.06400514659507,1.12135520028461,0,1.97334038733728,0.622422070799533,1.48181739276657,0.817309515567294,0.908144565869588,1.15235184896,2.10889288650417,0.312160076830321,0.570471821544449,1.94283284717341,1.40921398372518,1.45685649931318,2.52811452064047,0.61246251376468,1.59684612505298,2.37649296704261,7.12801714369232,4.69807165629258,0.910161361938026,5.03032699271367,1.17835279767846,2.00189631795143,0.831192346452549,0.438977620880838,3.0648779579902,3.30523729594513,1.02088964844019,0.179389635688862,1.49490172172997,1.05965950579781,1.50045548042201,1.75189299705346,1.28820270022815,1.8611685633159,0,0.974370051611986,1.00973509697646,1.65689817556139,1.13152239773168,1.06502877754984,0.503760491138201,1.18692414617341,0.57978255948989,0.272746120590835,0.286804595389004,0.121973706129595,0.132529768321485,0.813357600086629,0.518305275076852,0,0.36497735907583,3.12899064659632,6.43240938192885,2.76269842704961,4.17931135228781,0.721879481669586,0,0,0,0,0,0.237270619111097,0.269662616320329,0.196221465125346,0.769494313892781,1.4763109092493,2.80483547606892,1.2347220339942,2.94017422771084,0,0,0,0,0,0.857839051492628,0,0,0.100528972411631,0.185176890317059,1.95484983186195,3.11980435583874,0,0.811512834825538,0.469634776943287,0.288732895522148,0,0.761016608938393,0,0,1.23108503043699,0.234004265139238,0.445893486866185,0,0,0.141775097242386,0.447792613514241,0,0.766765358330422,0,0.528290604079356,1.03664057770386,1.00883967391873,0.50496973370552,0.63497894292169,1.90994212779139,2.34434894420094,0,1.33675740514321,2.40274446275134,0.285826432630578,1.12131084345361,3.48768055066624,1.0267360014933,0.904902010304444,14.3062578340753,1.690605505112,0.531876233169741,3.12022310734098,2.82928111688356,1.41849132023278,3.19706614819319,0.714889968290738,2.71310802695722,4.11620168390384,3.25736184293735,1.77695974371273,3.16780749173372,0.301439377059586,0.871533458600294,0.899756920638513,0,0.502257091432126,2.10833939483032,1.67737398844108,0,0,1.44781306667579,1.2328579353023,1.25342674267927,0.112085143993527,0.197030760201927,0,0,1.01637849688985,0,0,0.502548796003046,0,0.749007023947182,0,0.414415513436035,1.96306386750624,3.50119364741774,2.17012018959788,1.45579603071565,1.42743191037729,0.788512075169673,1.63997980989798,3.31040709700491,11.3703752027992,8.27784570340039,1.32845119707087,2.39679919104214,1.30325421702124,3.13281851940385,3.77457766191941,0,0.215714200818617,0,6.06255142892519,4.99306318531491,2.11673205330776,2.72918588600655,0.767309866440312,2.24528075546459,1.66580894032411,2.55853624533352,1.76939313257968,1.48418066444991,2.00472601943452,1.77561725313127,1.39616165223476,2.07701771673448,3.25389059687886,0.120859449591622,0.200506470303285,0,1.37777337797528,1.82091168006717,2.75361271414791,0.902399225814824,0.693138033939733,2.35304930753057,1.46139224653261,0.633309773357254,1.13733384070897,1.36074964221213,0.431831832204279,1.54227252690289,2.70946437543853,8.02703638167765,2.29388645740534,1.66215201785745,1.11937377361089,0,0.261435451024901,2.3080511260475,0.656029291399411,0.650756789328606,0.824328093181778,0.640986253728404,0.577566499444116,0.574265537996172,0.650060246036521,0,3.19013370364003,1.54048617114644,1.38153307253517,2.20538515975249,0.966782203814463,2.0302337147992,1.02271952899321,1.24644849905432,0.165284915360978,0,0.382838137483752,0.10115778085555,2.78907329578371,0.62962469366128,0.6970372701606,1.84820148105653,1.59691809095107,1.73986598415015,1.29726953372744,1.28812398067792,1.116475108079,1.58189712359363,1.33441135746677,2.303080121802,2.56763392820352,2.22742273548156,1.56989728039846,1.2591072030832,1.09814811894422,0.353437207037059,3.23491970517306,1.58510321173008,1.26377536871694,1.95053495635836,2.68084838594413,3.16950440270266,1.09199929126389,2.40389234321312,2.26016233240486,2.75682671773062,1.99031692572366,1.31535265576129,2.89387767133344,0.655894752046633,1.62328301570163,2.78841148289775,3.3803472303869,0.717056761020258,0.982490410131212,1.78335525740625,3.90237170477658,2.53329162357197,3.95153871551882,2.65631221636001,3.49934720244983,0.577332676353072,2.68120910214315,1.08890984861323,0.941438007767792,0.86101074534246,0,0.443430153536676,0.459446800413919,0,0,0.569647187174163,0.952927101831156,0.411362273086194,0,0.540031437238115,0,0.213648142254946,0,0,0,0,0,0,0.399158742865633,0.766021480529467,0,0.649243880549111,0.842391534340376,0,0,0,0.169291777801603,0,0.403599414382095,0,0,0,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0,0.586032717087576,0.606802608747567,0,0.284136146806413,0.71623345421307,0.296964680832639,0.614321404198464,0,0.281338832821026,0.333926115068718,0.16480387422676,0,1.39473591775749,0,0.503865495708552,0.409074730008619,0,1.24415835064723,0,0,0.511572370226872,0.887790650732402,0,1.11136990144637,0,0,0,0,0.0874599999961957,2.17499872630438,0,0.508507300585533,0,0,0,0.520874984799877,0,0.120596438625408,0,0,0,0,0,0,1.23120413606075,0.341826167541004,0.69169171316418,0.628303510868405,0.217294743844016,2.23300811812344,2.28993983504656,2.66517388009317,0,0.31396051279005,0,0,0.19606253431774,0,0,0.158936578980379,0.632994193584081,0,0.141353071433941,0.432777279484182,0,0.353830258013357,0.611030144933625,0,0.123563938946503,0.104421949505455,0.202203398942031,1.60515529459758,0,0,0.19566461893209,0,0.394584402849391,1.20990716048664,0.30607276163049,0.505492637027904,0.60129367765797,0.207376382794494,0,0.661983911750998,0.941798755221676,0,0,3.32819215231533,0,0.0979923974143777,0.0870592065804026,0.34945333648406,3.43972064943233,0,0.0730893170861856,0,0.484945082442097,1.6768664071385,0.677942222341597,0,0.19871461170299,0.126621591911757,0.195551382734803,0.320635281006135,0.640358984218058,0.19980960958213,0,0.458146384663663,0,0,0.124252535565433,0.471388069233591,0.407712618220842,0.313808538937,0.101998217636322,0.577901179803038,0,0,3.83239764200917,0,0,0.279282401272254,0.458320848023367,0,0.199679000498991,0.429226048136571,0,0.268733889946905,1.08089965062721,0,0.0787831823072236,0.164831716762333,0,0.0984274815147488,0,0,0.136203406111576,0.964518890790115,0.412618309791701,1.24632101408756,0.2249738915515,0,0.182248669974074,0,0.709251365692784,0.786818822024972,0.422401346077626,0,0.767660789277781,1.42939065274673,0,0.25426853765475,4.88699641578341,2.5926644736038,5.22539776175055,0,0,1.87426823963964,1.13312091520126,0.293104467356165,0,0.129282956361551,0.39669780522807,0.342173675768659,0,0.640724475406168,0.78602152549833,0.414239055347196,0.992332043623902,0.790446527591777,0,0,0,0.2506898940227,0.306345576763462,0.327872630709804,0,0,0,0.250381861413,0,0.443716206147409,0.18628920882415,0.138348634936231,0.249960815924213,0.303298235083296,0.570930667089935,1.6468607378872,0,0,0.74627401443437,0.934853239388898,1.66441758450784,0.947015026375446,0.251567901752575,0.889811221596536,1.83072054717539,1.66354016139563,1.39893480524502,2.06997209985487,0.63718706865481,1.34940933649081,1.08684069813382,1.65882483136342,1.59505028734797,0.521745061811734,1.80309130796662,0,0.813741466409323,0.909243296012797,0.859284456339908,0.464033759878494,1.19428766609585,0.400027764663154,2.74716564146234,2.69399591012735,0,1.92619830407303,0.428883182749851,0.782982875895635,0.680117776536817,1.389134845943,0.734210113519403,0.895444205407437,0.617602894321944,0,0.530067437837643,0.771656153083659,0.844712203265363,0,0.345430341731199,0.607719912354764,0.276516872303462,0,0.132864840313363,0.327130788511688,0,0,0.211312123358627,0.19998739585493,0.213383459388282,0,0.567515953566836,0.736423801007363,0,1.86623178009892,0,0,0.471797825567689,0,0.509197589862076,0.425149840203366,0,0.558644917973244,0.636008701306837,0,0,2.82140754952547,0.918736432059601,0.0642292250964595,0,0.319267718114302,0,0.252071696221718,0.207471757392654,0,0,0,0,0.183428598521679,0.231051332300676,2.288292572803,0,0.994581110581374,1.35378591028663,0,0,0.523813388962845,0.49131575253029,0.443568258651136,0.202612753855184,0,0.413373593002368,0.0634158101939068,0,0,0.496211178389294,0.527613733078862,0.255524855279191,0,0,0,0,3.90290428715611,0.230467975111559,0.685952037749674,0,0.131545547125698,0.590969204419841,0.444925607568277,1.0989032999072,0.157115589916002,0.280272163313789,0.913158720509496,0.431855182437243,0,0.285906176706625,0,0,1.56472445072321,0.801711364730253,0.207216164163037,0.17071847709395,0,0,1.30165200803622,0.852134047591577,0,0.22910686854405,0.93061915699296,0.955538938977433,1.23040974977572,0,0,0,0.307988420568741,3.4794432940146,0,0,0,2.97300226943921,0.11294608203896,0,0,0.0771741581079447,0.655678681511872,0,0.735444965261716,0,0.392616934229891,0.297046400327086,0,1.52934403219035,0.469919589899268,0.515663103788617,0,0.535661815816973,0,0,0,0,0.286679166302903,0.946629373159108,0.271965960763659,0,0.5290268405154,1.85997509083376,1.38652688589425,1.73050624849516,0.378499274505237,0.546327859818478,0.253397002022874,0.305966489225945,1.06886962106224,0,0,0.833565680400634,0.267964130156178,0,0.20686599172379,0.639701945702943,0.714193294391221,0.129177819672012,0,0.112131862580613,0.509177266225319,0.808468755832877,0,0,0.202056159043763,0.286888821570705,0,0.488419611665847,0.853818767021724,0,0.538951212639521,0,0.977931553462932,1.62758471326295,0.665756774185513,0,0 | |||
|short_description=p2@FAM176B | |||
}} |
Revision as of 17:51, 10 January 2014
Short description: | p2@FAM176B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAM176B_5end |
Coexpression cluster: | C1437_Mesenchymal_Osteoblast_Renal_Pericytes_Placental_Fibroblast_Nucleus |
Association with transcript: | -41bp_to_ENST00000490466_5end |
EntrezGene: | FAM176B |
HGNC: | 25558 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.03e-18 | 58 |
myoblast | 2.03e-18 | 58 |
multi-potent skeletal muscle stem cell | 2.03e-18 | 58 |
muscle cell | 2.69e-17 | 55 |
electrically responsive cell | 5.21e-15 | 61 |
electrically active cell | 5.21e-15 | 61 |
mesodermal cell | 5.37e-15 | 121 |
multi fate stem cell | 2.05e-14 | 427 |
smooth muscle cell | 3.01e-14 | 43 |
smooth muscle myoblast | 3.01e-14 | 43 |
fibroblast | 6.22e-14 | 76 |
somatic stem cell | 1.36e-13 | 433 |
stem cell | 1.52e-12 | 441 |
vascular associated smooth muscle cell | 1.76e-10 | 32 |
stromal cell | 1.64e-08 | 28 |
preadipocyte | 1.56e-07 | 12 |
extracellular matrix secreting cell | 2.40e-07 | 15 |