FFCP PHASE1:Hg19::chr10:103575708..103575716,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:103575708..103575716,- | |||
|id=chr10:103575708..103575716,- | |||
|ontology_enrichment_celltype=CL:0000838!1.24e-11!52;CL:0000542!2.01e-11!53;CL:0000051!2.01e-11!53;CL:0002087!1.74e-08!119;CL:0000738!3.32e-08!140;CL:0002031!5.96e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000542;7.93e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.37e-12,52;CL:0000542,8.87e-12,53;CL:0000051,8.87e-12,53;CL:0002087,1.58e-08,115;CL:0000738,3.86e-08,136;CL:0002031,5.51e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000051;7.93e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.70e-27!115;UBERON:0001049!1.25e-16!57;UBERON:0005068!1.25e-16!57;UBERON:0006241!1.25e-16!57;UBERON:0007135!1.25e-16!57;UBERON:0003080!5.67e-15!42;UBERON:0002780!1.64e-14!41;UBERON:0001890!1.64e-14!41;UBERON:0006240!1.64e-14!41;UBERON:0002616!8.63e-14!59;UBERON:0001017!6.73e-13!82;UBERON:0002020!7.37e-13!34;UBERON:0003528!7.37e-13!34;UBERON:0001893!8.60e-13!34;UBERON:0000955!1.05e-12!69;UBERON:0006238!1.05e-12!69;UBERON:0002791!1.06e-12!33;UBERON:0001869!1.26e-12!32;UBERON:0005743!1.65e-11!86;UBERON:0000073!7.40e-11!94;UBERON:0001016!7.40e-11!94;UBERON:0000956!2.57e-10!25;UBERON:0000203!2.57e-10!25;UBERON:0002619!1.06e-09!22;UBERON:0002346!1.21e-09!90;UBERON:0001950!1.21e-08!20;UBERON:0003075!1.46e-08!86;UBERON:0007284!1.46e-08!86;UBERON:0003056!8.69e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;2.25e-12;32!UBERON:0001869;3.27e-12;32!UBERON:0002780;9.86e-12;41!UBERON:0001890;9.86e-12;41!UBERON:0003528;1.04e-11;34!UBERON:0002020;1.04e-11;34!UBERON:0001893;1.49e-11;34!UBERON:0000956;9.91e-11;25!UBERON:0000203;9.91e-11;25!UBERON:0002619;5.11e-10;22!UBERON:0000073;1.56e-09;53!UBERON:0002616;1.56e-09;53!UBERON:0001950;6.38e-09;20!UBERON:0007023;5.14e-08;114!UBERON:0000922;2.44e-07;49!UBERON:0000955;8.69e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.35e-28,114;UBERON:0001049,6.52e-17,56;UBERON:0005068,6.52e-17,56;UBERON:0006241,6.52e-17,56;UBERON:0007135,6.52e-17,56;UBERON:0000073,1.01e-15,53;UBERON:0002616,1.01e-15,53;UBERON:0002780,3.13e-15,41;UBERON:0001890,3.13e-15,41;UBERON:0003080,3.13e-15,41;UBERON:0006240,3.13e-15,41;UBERON:0003528,1.73e-13,34;UBERON:0002020,1.73e-13,34;UBERON:0001893,2.04e-13,34;UBERON:0002791,2.33e-13,32;UBERON:0001869,3.06e-13,32;UBERON:0001017,1.42e-12,81;UBERON:0000955,5.02e-12,68;UBERON:0006238,5.02e-12,68;UBERON:0002346,9.77e-12,86;UBERON:0001016,1.22e-11,89;UBERON:0000956,8.38e-11,25;UBERON:0000203,8.38e-11,25;UBERON:0003075,1.65e-10,82;UBERON:0007284,1.65e-10,82;UBERON:0002619,3.75e-10,22;UBERON:0001950,4.86e-09,20;UBERON:0003056,1.73e-08,61 | |||
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| |||
|short_description=p@chr10:103575708..103575716,- | |||
}} |
Revision as of 04:38, 11 January 2014
Short description: | p@chr10:103575708..103575716, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:103575708..103575716, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 5.37e-12 | 52 |
lymphocyte | 8.87e-12 | 53 |
common lymphoid progenitor | 8.87e-12 | 53 |
nongranular leukocyte | 1.58e-08 | 115 |
leukocyte | 3.86e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 5.51e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.35e-28 | 114 |
neural tube | 6.52e-17 | 56 |
neural rod | 6.52e-17 | 56 |
future spinal cord | 6.52e-17 | 56 |
neural keel | 6.52e-17 | 56 |
regional part of nervous system | 1.01e-15 | 53 |
regional part of brain | 1.01e-15 | 53 |
regional part of forebrain | 3.13e-15 | 41 |
forebrain | 3.13e-15 | 41 |
anterior neural tube | 3.13e-15 | 41 |
future forebrain | 3.13e-15 | 41 |
brain grey matter | 1.73e-13 | 34 |
gray matter | 1.73e-13 | 34 |
telencephalon | 2.04e-13 | 34 |
regional part of telencephalon | 2.33e-13 | 32 |
cerebral hemisphere | 3.06e-13 | 32 |
central nervous system | 1.42e-12 | 81 |
brain | 5.02e-12 | 68 |
future brain | 5.02e-12 | 68 |
neurectoderm | 9.77e-12 | 86 |
nervous system | 1.22e-11 | 89 |
cerebral cortex | 8.38e-11 | 25 |
pallium | 8.38e-11 | 25 |
neural plate | 1.65e-10 | 82 |
presumptive neural plate | 1.65e-10 | 82 |
regional part of cerebral cortex | 3.75e-10 | 22 |
neocortex | 4.86e-09 | 20 |
pre-chordal neural plate | 1.73e-08 | 61 |