FFCP PHASE1:Hg19::chr11:3253872..3253882,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116534 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30694 | |||
|TSSclassifier=weak | |||
|UniProt=Q86SM8 | |||
|association_with_transcript=-256bp_to_ENST00000389832,ENST00000436689,NM_001039165,uc001lxq.3_5end | |||
|coexpression_cluster_id=C275 | |||
|description=CAGE_peak_3_at_MRGPRE_5end | |||
|id=chr11:3253872..3253882,- | |||
|ontology_enrichment_celltype=CL:0002601!2.71e-08!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.96e-34;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.66e-34!57;UBERON:0005068!7.66e-34!57;UBERON:0006241!7.66e-34!57;UBERON:0007135!7.66e-34!57;UBERON:0002298!1.69e-30!8;UBERON:0007023!5.40e-29!115;UBERON:0002616!8.11e-29!59;UBERON:0003076!2.70e-28!15;UBERON:0003057!2.70e-28!15;UBERON:0004733!2.48e-27!12;UBERON:0002028!2.48e-27!12;UBERON:0007277!2.48e-27!12;UBERON:0003075!6.00e-27!86;UBERON:0007284!6.00e-27!86;UBERON:0002346!1.37e-25!90;UBERON:0004732!3.61e-25!13;UBERON:0000955!7.86e-24!69;UBERON:0006238!7.86e-24!69;UBERON:0005743!8.79e-24!86;UBERON:0001017!2.90e-22!82;UBERON:0001896!8.52e-22!3;UBERON:0005290!8.52e-22!3;UBERON:0010096!8.52e-22!3;UBERON:0000073!3.16e-21!94;UBERON:0001016!3.16e-21!94;UBERON:0001893!4.45e-17!34;UBERON:0002020!5.53e-17!34;UBERON:0003528!5.53e-17!34;UBERON:0001869!9.77e-15!32;UBERON:0001950!1.44e-14!20;UBERON:0002791!3.44e-14!33;UBERON:0002780!5.93e-14!41;UBERON:0001890!5.93e-14!41;UBERON:0006240!5.93e-14!41;UBERON:0000033!8.64e-14!123;UBERON:0003080!1.37e-13!42;UBERON:0002619!3.13e-13!22;UBERON:0004121!3.96e-13!169;UBERON:0000153!5.39e-13!129;UBERON:0007811!5.39e-13!129;UBERON:0000924!9.77e-13!173;UBERON:0006601!9.77e-13!173;UBERON:0001872!9.78e-13!5;UBERON:0002680!2.74e-12!9;UBERON:0001895!2.74e-12!9;UBERON:0010092!2.74e-12!9;UBERON:0000064!9.77e-12!219;UBERON:0000956!1.30e-11!25;UBERON:0000203!1.30e-11!25;UBERON:0000025!4.89e-11!194;UBERON:0003056!6.31e-11!61;UBERON:0000988!4.58e-10!3;UBERON:0006331!1.12e-09!3;UBERON:0004111!4.20e-09!241;UBERON:0007190!3.34e-08!1;UBERON:0002581!3.83e-08!1;UBERON:0002146!4.11e-08!1;UBERON:0005623!4.11e-08!1;UBERON:0001301!5.05e-08!1;UBERON:0002038!6.63e-08!1;UBERON:0009661!6.63e-08!1;UBERON:0001882!1.14e-07!1;UBERON:0005403!1.14e-07!1;UBERON:0002022!1.21e-07!1;UBERON:0000483!4.77e-07!309;UBERON:0002308!5.14e-07!9;UBERON:0000125!5.14e-07!9;UBERON:0000477!5.28e-07!286;UBERON:0000119!6.16e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002680;9.75e-45;9!UBERON:0001895;9.75e-45;9!UBERON:0000988;4.27e-34;3!UBERON:0004733;5.98e-34;12!UBERON:0002028;5.98e-34;12!UBERON:0004732;1.86e-31;13!UBERON:0002298;7.67e-18;6!UBERON:0002037;9.07e-18;6!UBERON:0000073;1.91e-07;53!UBERON:0002616;1.91e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002680,9.75e-45,9;UBERON:0001895,9.75e-45,9;UBERON:0010092,9.75e-45,9;UBERON:0000988,4.27e-34,3;UBERON:0004733,5.98e-34,12;UBERON:0002028,5.98e-34,12;UBERON:0007277,5.98e-34,12;UBERON:0004732,1.86e-31,13;UBERON:0003076,1.82e-27,15;UBERON:0003057,1.82e-27,15;UBERON:0002298,7.67e-18,6;UBERON:0002037,9.07e-18,6;UBERON:0006215,9.07e-18,6;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,1.52581736317083,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.554645257684261,0.683060432355218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0.206686796501184,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,0,5.3696089051697,0.263091094251396,0,0,0,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@MRGPRE | |||
}} |
Revision as of 06:15, 11 January 2014
Short description: | p3@MRGPRE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MRGPRE_5end |
Coexpression cluster: | C275_pons_medulla_cerebellum_locus_thalamus_diencephalon_spinal |
Association with transcript: | -256bp_to_ENST00000389832, ENST00000436689, NM_001039165, uc001lxq.3_5end |
EntrezGene: | MRGPRE |
HGNC: | 30694 |
UniProt: | Q86SM8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of metencephalon | 9.75e-45 | 9 |
metencephalon | 9.75e-45 | 9 |
future metencephalon | 9.75e-45 | 9 |
pons | 4.27e-34 | 3 |
segmental subdivision of hindbrain | 5.98e-34 | 12 |
hindbrain | 5.98e-34 | 12 |
presumptive hindbrain | 5.98e-34 | 12 |
segmental subdivision of nervous system | 1.86e-31 | 13 |
posterior neural tube | 1.82e-27 | 15 |
chordal neural plate | 1.82e-27 | 15 |
brainstem | 7.67e-18 | 6 |
cerebellum | 9.07e-18 | 6 |
rhombic lip | 9.07e-18 | 6 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |