FFCP PHASE1:Hg19::chr11:77123065..77123077,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5058 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8590 | |||
|TSSclassifier=strong | |||
|UniProt=B3KNX7 | |||
|association_with_transcript=31bp_to_ENST00000530617_5end | |||
|description=CAGE_peak_11_at_PAK1_5end | |||
|id=chr11:77123065..77123077,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000307;7.32e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.37e-07,3;CL:0000069,1.37e-07,3;CL:0000307,1.37e-07,3;CL:0000377,1.37e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;7.32e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!6.01e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;5.89e-15;20!UBERON:0002619;2.15e-13;22!UBERON:0000956;1.66e-11;25!UBERON:0000203;1.66e-11;25!UBERON:0001869;1.31e-10;32!UBERON:0000200;2.35e-10;6!UBERON:0001893;4.00e-10;34!UBERON:0002791;3.27e-09;32!UBERON:0003528;3.39e-08;34!UBERON:0002020;3.39e-08;34!UBERON:0001870;5.43e-08;3!UBERON:0000073;7.62e-07;53!UBERON:0002616;7.62e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.09e-15,20;UBERON:0002619,1.20e-13,22;UBERON:0001869,5.51e-12,32;UBERON:0000956,1.00e-11,25;UBERON:0000203,1.00e-11,25;UBERON:0001893,4.27e-11,34;UBERON:0000073,8.51e-11,53;UBERON:0002616,8.51e-11,53;UBERON:0000200,2.01e-10,6;UBERON:0002791,3.47e-10,32;UBERON:0002780,4.61e-10,41;UBERON:0001890,4.61e-10,41;UBERON:0003080,4.61e-10,41;UBERON:0006240,4.61e-10,41;UBERON:0001017,4.79e-10,81;UBERON:0001049,5.55e-10,56;UBERON:0005068,5.55e-10,56;UBERON:0006241,5.55e-10,56;UBERON:0007135,5.55e-10,56;UBERON:0003528,2.01e-09,34;UBERON:0002020,2.01e-09,34;UBERON:0000955,2.11e-09,68;UBERON:0006238,2.11e-09,68;UBERON:0001016,1.71e-08,89;UBERON:0001870,3.87e-08,3;UBERON:0010371,4.11e-08,104;UBERON:0003056,1.70e-07,61;UBERON:0003075,4.69e-07,82;UBERON:0007284,4.69e-07,82 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0.369363174230364,0.612002073732759,0.313454721478088,0,0.273748850145768,0,2.52164238968239,2.46301768349837,2.51874500203774,0.393364276848904,0.383829398097213,0.309632246632152,0,1.204823675113,0.739508020333575,0.154934401160603,0.284338464974843,0,0,0,0.217010870715852,0,0.32389366601898,0,0,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,0.619412741790207,0.28769239232215,0,0,0.344745680736619,0,0,0.376484679085209,0,0.224723484445085,0,0.641858054152187,1.91801137739712,1.31940520074686,0.199463657621632,0,0.290209238628584,1.13477044938228,0,0,0,0,0,0,0,0.422510572623884,0.425208599930087,0.209658645508376,0.44931452458598,0.300353785683013,0.64290234678832,0.855038231223746,1.19350006319454,0.365328307529268,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0.361439152384566,0,0,0,0,0.189069634328136,0.221729397462564,0,0.458426764241994,0.364295288292542,1.11235332835329,0.97364218096405,0.870648686496336,0.664789802594326,0.476981248610684,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0,0,0,0.709336764396714,0,0,0,0.311211035399766,0,0.163461903113459,0.151357427644931,0,0.937285727335186,0,0,0,1.996386476944,1.13311061057692,1.54495887372473,0.408308342509787,0.982674538494144,0.103325781175765,0,0,0,0.718618141816238,1.34668891163253,1.37630371859161,0.277064115484183,0.438977620880838,0,0.300476117813194,0,0.179389635688862,0,0,0,0.206105058476878,0,0.18611685633159,0.337552664482532,0.0974370051611986,0.252433774244115,0,0,0.710019185033229,0.705264687593482,0.169560592310488,0.57978255948989,0,0,1.21973706129595,0.662648841607426,0.929551542956147,0.829288440122964,2.77552935963191,0.36497735907583,0,1.28648187638577,0,0,0.721879481669586,0,0.168584690078102,0.241011029883482,0,0.435758888184812,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.329250856225877,1.1240175325762,0.703702806881416,0.0925884451585296,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0.283550194484773,1.16426079513703,1.45316969256981,1.91691339582606,14.7798971368783,0.880484340132261,1.03664057770386,0.432359860250884,1.2624243342638,0.063497894292169,0.381988425558278,0,0,0,0,0,0.112131084345361,0.43596006883328,0.7333828582095,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,1.3321108950805,0,0,0,0.977208552881205,0,0,0,0,0,0,0.502257091432126,0,0,0,4.27910715122155,0.579125226670317,0,0.537182889719687,0,0,0,0.256686072559497,0.508189248444927,0,0,0,0,0,2.99161459204025,1.24324654030811,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,1.03473071292505,0.664225598535437,0.368738337083406,0.60818530127658,0,0.686286847621712,0.413536052245775,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,1.3878872442239,0.177561725313127,0.657017248110473,0.519254429183621,1.39452454151951,0,0,0,0.229628896329213,0.364182336013434,0,0,0,0,0,0,0,0,0.215915916102139,0,0.541892875087706,0,0.254876273045038,0,0,0.877039506583738,0.522870902049801,0,0,0,0,0.457847324091717,0.247528499761764,0,0,0,0.193341436584244,0.462145851343933,1.38153307253517,0.689182862422653,0.644521469209642,0.290033387828457,0.511359764496605,0.267096106940212,0.165284915360978,0,0,0.6069466851333,0,0.94443704049192,0,0.308033580176089,0.532306030317022,1.73986598415015,0.37064843820784,0.143124886741991,0,0.632758849437452,0,0.255897791311334,0,0.318203247925937,0,0.179872457583315,0.54907405947211,0.235624804691373,0.404364963146632,0,0.421258456238981,0.975267478179181,0,0,0.409499734223957,0.141405431953713,0,0,0,0,0.578775534266688,0,0.202910376962704,0.30982349809975,0.563391205064483,0.143411352204052,0,0,0.709522128141196,0,0,1.89736586882858,0,1.44333169088268,2.01090682660736,1.08890984861323,0,0.86101074534246,0,0,0,0,0,0.569647187174163,0.238231775457789,0.822724546172388,1.29694662238543,0.540031437238115,0.79312517629427,0.427296284509893,1.92495971052672,0.490080431962063,0,0,0.284567373393656,0.478278818186467,0.399158742865633,0.5745161103971,0.211673582723883,0.649243880549111,0.280797178113459,0.228234679033192,0.156679895773023,2.50634477090067,1.18504244461122,0.642352300414798,0.403599414382095,4.68430861459359,0.343505344755765,1.53620382154229,0.671028323677248,1.00109485027145,1.36771666781428,0,0,0,0,0,0.37428108081644,0.146508179271894,1.09224469574562,0.222886768554957,0,0,0,0.614321404198464,0.994147647766298,1.82870241333667,0.111308705022906,0.329607748453519,0.211125408127993,0.19924798825107,0,0,0,1.23084805461069,0,0.539210106883961,0,0,0.0986434056369336,0,0,2.90799823828566,1.48428957058962,0,0,0.0874599999961957,0,0.341380344856499,0.508507300585533,0,0,0,0.347249989866585,0,0.241192877250816,0,0.442317039724898,2.0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| |||
|short_description=p11@PAK1 | |||
}} |
Revision as of 09:31, 11 January 2014
Short description: | p11@PAK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PAK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 31bp_to_ENST00000530617_5end |
EntrezGene: | PAK1 |
HGNC: | 8590 |
UniProt: | B3KNX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.37e-07 | 3 |
branched duct epithelial cell | 1.37e-07 | 3 |
tracheal epithelial cell | 1.37e-07 | 3 |
tracheoblast | 1.37e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
neocortex | 3.09e-15 | 20 |
regional part of cerebral cortex | 1.20e-13 | 22 |
cerebral hemisphere | 5.51e-12 | 32 |
cerebral cortex | 1.00e-11 | 25 |
pallium | 1.00e-11 | 25 |
telencephalon | 4.27e-11 | 34 |
regional part of nervous system | 8.51e-11 | 53 |
regional part of brain | 8.51e-11 | 53 |
gyrus | 2.01e-10 | 6 |
regional part of telencephalon | 3.47e-10 | 32 |
regional part of forebrain | 4.61e-10 | 41 |
forebrain | 4.61e-10 | 41 |
anterior neural tube | 4.61e-10 | 41 |
future forebrain | 4.61e-10 | 41 |
central nervous system | 4.79e-10 | 81 |
neural tube | 5.55e-10 | 56 |
neural rod | 5.55e-10 | 56 |
future spinal cord | 5.55e-10 | 56 |
neural keel | 5.55e-10 | 56 |
brain grey matter | 2.01e-09 | 34 |
gray matter | 2.01e-09 | 34 |
brain | 2.11e-09 | 68 |
future brain | 2.11e-09 | 68 |
nervous system | 1.71e-08 | 89 |
frontal cortex | 3.87e-08 | 3 |
ecto-epithelium | 4.11e-08 | 104 |
pre-chordal neural plate | 1.70e-07 | 61 |
neural plate | 4.69e-07 | 82 |
presumptive neural plate | 4.69e-07 | 82 |