FFCP PHASE1:Hg19::chr12:10365624..10365644,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23710 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4068 | |||
|TSSclassifier=strong | |||
|UniProt=G3V1T7 | |||
|association_with_transcript=-60bp_to_ENST00000541960_5end | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_2_at_GABARAPL1_5end | |||
|id=chr12:10365624..10365644,+ | |||
|ontology_enrichment_celltype=CL:0000860!4.33e-09!45;CL:0002057!3.01e-08!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.10e-08;33!CL:0002057;2.10e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.74e-08,42;CL:0002057,5.74e-08,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.06e-19!115;UBERON:0000062!2.18e-17!511;UBERON:0001049!1.28e-13!57;UBERON:0005068!1.28e-13!57;UBERON:0006241!1.28e-13!57;UBERON:0007135!1.28e-13!57;UBERON:0002616!3.47e-13!59;UBERON:0000468!7.03e-13!659;UBERON:0000467!1.24e-12!625;UBERON:0000480!1.47e-12!626;UBERON:0000955!1.71e-12!69;UBERON:0006238!1.71e-12!69;UBERON:0003075!2.76e-12!86;UBERON:0007284!2.76e-12!86;UBERON:0001017!1.23e-11!82;UBERON:0005743!1.91e-11!86;UBERON:0002346!2.82e-11!90;UBERON:0002780!2.95e-11!41;UBERON:0001890!2.95e-11!41;UBERON:0006240!2.95e-11!41;UBERON:0003080!1.90e-10!42;UBERON:0000073!2.22e-09!94;UBERON:0001016!2.22e-09!94;UBERON:0002020!1.10e-08!34;UBERON:0003528!1.10e-08!34;UBERON:0003056!2.05e-08!61;UBERON:0001869!2.66e-08!32;UBERON:0000064!3.03e-08!219;UBERON:0000477!3.26e-08!286;UBERON:0001893!3.29e-08!34;UBERON:0002619!8.03e-08!22;UBERON:0002791!1.03e-07!33;UBERON:0000033!1.26e-07!123;UBERON:0000922!1.35e-07!612;UBERON:0004111!2.96e-07!241;UBERON:0001950!4.02e-07!20;UBERON:0002050!6.49e-07!605;UBERON:0005423!6.49e-07!605;UBERON:0000923!6.65e-07!604;UBERON:0005291!6.65e-07!604;UBERON:0006598!6.65e-07!604;UBERON:0002532!6.65e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.30e-09;53!UBERON:0002616;1.30e-09;53!UBERON:0002780;1.67e-09;41!UBERON:0001890;1.67e-09;41!UBERON:0002619;2.68e-09;22!UBERON:0003528;4.58e-09;34!UBERON:0002020;4.58e-09;34!UBERON:0001869;7.08e-09;32!UBERON:0001893;1.19e-08;34!UBERON:0001950;1.55e-08;20!UBERON:0002791;2.25e-08;32!UBERON:0000955;9.92e-08;68!UBERON:0000956;3.03e-07;25!UBERON:0000203;3.03e-07;25!UBERON:0001017;6.15e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.59e-21,114;UBERON:0000073,1.48e-16,53;UBERON:0002616,1.48e-16,53;UBERON:0001049,1.74e-16,56;UBERON:0005068,1.74e-16,56;UBERON:0006241,1.74e-16,56;UBERON:0007135,1.74e-16,56;UBERON:0000955,1.56e-14,68;UBERON:0006238,1.56e-14,68;UBERON:0002780,1.94e-13,41;UBERON:0001890,1.94e-13,41;UBERON:0003080,1.94e-13,41;UBERON:0006240,1.94e-13,41;UBERON:0001017,9.65e-13,81;UBERON:0003075,1.15e-12,82;UBERON:0007284,1.15e-12,82;UBERON:0002346,4.45e-11,86;UBERON:0003528,2.27e-10,34;UBERON:0002020,2.27e-10,34;UBERON:0001016,2.40e-10,89;UBERON:0001869,6.46e-10,32;UBERON:0001893,8.56e-10,34;UBERON:0003056,1.71e-09,61;UBERON:0002619,2.53e-09,22;UBERON:0002791,3.48e-09,32;UBERON:0010314,1.44e-08,132;UBERON:0001950,1.71e-08,20;UBERON:0000956,2.87e-07,25;UBERON:0000203,2.87e-07,25;UBERON:0010371,5.33e-07,104 | |||
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| |||
|short_description=p2@GABARAPL1 | |||
}} |
Revision as of 12:06, 11 January 2014
Short description: | p2@GABARAPL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GABARAPL1_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -60bp_to_ENST00000541960_5end |
EntrezGene: | GABARAPL1 |
HGNC: | 4068 |
UniProt: | G3V1T7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.74e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.74e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.59e-21 | 114 |
regional part of nervous system | 1.48e-16 | 53 |
regional part of brain | 1.48e-16 | 53 |
neural tube | 1.74e-16 | 56 |
neural rod | 1.74e-16 | 56 |
future spinal cord | 1.74e-16 | 56 |
neural keel | 1.74e-16 | 56 |
brain | 1.56e-14 | 68 |
future brain | 1.56e-14 | 68 |
regional part of forebrain | 1.94e-13 | 41 |
forebrain | 1.94e-13 | 41 |
anterior neural tube | 1.94e-13 | 41 |
future forebrain | 1.94e-13 | 41 |
central nervous system | 9.65e-13 | 81 |
neural plate | 1.15e-12 | 82 |
presumptive neural plate | 1.15e-12 | 82 |
neurectoderm | 4.45e-11 | 86 |
brain grey matter | 2.27e-10 | 34 |
gray matter | 2.27e-10 | 34 |
nervous system | 2.40e-10 | 89 |
cerebral hemisphere | 6.46e-10 | 32 |
telencephalon | 8.56e-10 | 34 |
pre-chordal neural plate | 1.71e-09 | 61 |
regional part of cerebral cortex | 2.53e-09 | 22 |
regional part of telencephalon | 3.48e-09 | 32 |
structure with developmental contribution from neural crest | 1.44e-08 | 132 |
neocortex | 1.71e-08 | 20 |
cerebral cortex | 2.87e-07 | 25 |
pallium | 2.87e-07 | 25 |
ecto-epithelium | 5.33e-07 | 104 |