FFCP PHASE1:Hg19::chr12:93968004..93968009,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2248 | |||
|description=CAGE_peak_at_chr12:93968004..93968009,+ | |||
|id=chr12:93968004..93968009,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.12e-17;1!UBERON:0007297;1.64e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;5.72e-18;1!DOID:0060061;5.72e-18;1!DOID:8691;5.72e-18;1!DOID:1036;3.27e-09;8 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,5.26e-18,1;DOID:0060061,5.26e-18,1;DOID:8691,5.26e-18,1;DOID:1036,3.14e-09,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.86e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.00e-22;3!UBERON:0004054;1.00e-22;3!UBERON:0001000;1.12e-17;1!UBERON:0000998;1.12e-17;1!UBERON:0006868;1.12e-17;1!UBERON:0005352;1.12e-17;1!UBERON:0005904;2.59e-17;4!UBERON:0002331;9.10e-16;10!UBERON:0000178;1.01e-10;15!UBERON:0000179;1.01e-10;15!UBERON:0000463;1.01e-10;15!UBERON:0000058;1.73e-07;10!UBERON:0000478;6.61e-07;24!UBERON:0003135;6.94e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,8.04e-23,3;UBERON:0004054,8.04e-23,3;UBERON:0001000,7.37e-18,1;UBERON:0005352,7.37e-18,1;UBERON:0000998,1.22e-17,1;UBERON:0006868,1.22e-17,1;UBERON:0005904,2.19e-17,4;UBERON:0002331,9.10e-16,10;UBERON:0000358,9.10e-16,10;UBERON:0000307,9.10e-16,10;UBERON:0000091,9.10e-16,10;UBERON:0000087,9.10e-16,10;UBERON:0007010,9.10e-16,10;UBERON:0007806,9.10e-16,10;UBERON:0008780,9.10e-16,10;UBERON:0005728,9.10e-16,10;UBERON:0000178,1.01e-10,15;UBERON:0000179,1.01e-10,15;UBERON:0000463,1.01e-10,15;UBERON:0003135,6.54e-07,11;UBERON:0000478,6.61e-07,24 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0.534880391567015,0.289648807765598,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0.500474079487857,0,0,0,0.150238058906597,0,0.717558542755448,0,0,0.300091096084402,0,0,0,0.168776332241266,0.0974370051611986,0.504867548488229,0,0,0.355009592516614,0,0.508681776931463,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.352193736052904,0,1.15295962733569,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,0,0.920771839728375,0,0,0,0,0,0,0,0,0,0.232420756919918,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0.145016693914229,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.92289418201569,0.398495976502139,0,0.251932747854276,0.102268682502155,0,0,0.0898683511473268,0,0.511572370226872,0,0,0,0,0,0,0,0.262379999988587,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0,0.615602068030377,0,0,0.179515288819544,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,1.41282230755522,0,0.451191321234361,0.19606253431774,0,0.37950746544837,0.158936578980379,0,0,0,0,0.995261931078505,0.0884575645033392,0,6.52346483097368,5.43681331364613,5.74320722280005,0,0,0,0,0,0,1.57833761139756,0,0.30607276163049,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0.261177619741208,0,0,0,0.0730893170861856,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0.418411385249333,0,0,0.600420288709789,0.273810757783986,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.275078873194468,0,0,0,0,0.335434687599266,0.157611414598396,0,0.105600336519406,0,0,0.714695326373367,0,0,0,0,0,0,2.62696066397885,0,0,0.439656701034247,1.32506888912221,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0.5013797880454,0,0,0,0,0,0.1251909307065,0.573409195690071,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0.256241518587947,0,0,0,0,0,0.163565394255844,0,0,0,2.99981093782395,0,0,0,0,0,0,0,0.539124056983409,0,0.109209638192014,0,0.212574920101683,0.247871528518004,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0.261906694481422,0,0.147856086217045,0,0.781078098613847,0.826747186004736,0,0,0,0,0.175871244359621,0,0.535701835878287,0,0,0.91064876540519,0.354809480650555,0,0,0.135939465953663,0,0.118193840883968,0,0.078493092850514,0,0,0,0,0,0.285906176706625,0,0.116241425368125,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0.111855431797792,0,0,0,0,0,0.485710993059139,0.233939463462106,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0.297046400327086,0,0.339854229375634,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0,0,0.101988829741982,0,0.0918948995348449,0,0.0757786982182394,0,0,0.20686599172379,0,0.476128862927481,0,0.0620747142958579,0,0.0636471582781649,0.808468755832877,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr12:93968004..93968009,+ | |||
}} |
Revision as of 15:13, 11 January 2014
Short description: | p@chr12:93968004..93968009, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:93968004..93968009, + |
Coexpression cluster: | C2248_anaplastic_cord_Mast_leukemia_mycosis_chronic_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 8.04e-23 | 3 |
internal male genitalia | 8.04e-23 | 3 |
vas deferens | 7.37e-18 | 1 |
spermatic cord | 7.37e-18 | 1 |
seminal vesicle | 1.22e-17 | 1 |
seminal fluid secreting gland | 1.22e-17 | 1 |
duct of male reproductive system | 2.19e-17 | 4 |
umbilical cord | 9.10e-16 | 10 |
blastocyst | 9.10e-16 | 10 |
blastula | 9.10e-16 | 10 |
bilaminar disc | 9.10e-16 | 10 |
inner cell mass | 9.10e-16 | 10 |
cleaving embryo | 9.10e-16 | 10 |
connecting stalk | 9.10e-16 | 10 |
inner cell mass derived epiblast | 9.10e-16 | 10 |
extraembryonic mesoderm | 9.10e-16 | 10 |
blood | 1.01e-10 | 15 |
haemolymphatic fluid | 1.01e-10 | 15 |
organism substance | 1.01e-10 | 15 |
male reproductive organ | 6.54e-07 | 11 |
extraembryonic structure | 6.61e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 5.26e-18 | 1 |
cutaneous T cell lymphoma | 5.26e-18 | 1 |
mycosis fungoides | 5.26e-18 | 1 |
chronic leukemia | 3.14e-09 | 8 |