FFCP PHASE1:Hg19::chr13:33002422..33002429,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90634 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25037 | |||
|TSSclassifier=strong | |||
|UniProt=Q5TBK1,Q9UQP6 | |||
|association_with_transcript=-107bp_to_ENST00000380130,NM_001079691,NM_052818,uc001uuc.2,uc001uud.2,uc001uuf.2,uc010tdy.1_5end | |||
|description=CAGE_peak_4_at_N4BP2L1_5end | |||
|id=chr13:33002422..33002429,- | |||
|ontology_enrichment_celltype=CL:0000037!2.66e-17!172;CL:0000566!2.66e-17!172;CL:0000738!1.26e-16!140;CL:0002031!1.84e-16!124;CL:0002087!1.74e-15!119;CL:0002032!3.09e-15!165;CL:0000837!3.09e-15!165;CL:0000988!3.23e-15!182;CL:0000838!4.58e-13!52;CL:0000542!1.42e-12!53;CL:0000051!1.42e-12!53;CL:0000791!4.89e-09!18;CL:0000789!4.89e-09!18;CL:0002420!4.89e-09!18;CL:0002419!4.89e-09!18;CL:0000790!4.89e-09!18;CL:0000084!1.46e-08!25;CL:0000827!1.46e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000784;8.62e-18;3!CL:0000815;1.91e-12;2!CL:0000792;1.91e-12;2!CL:0002677;1.91e-12;2!CL:0000791;6.29e-11;18!CL:0000789;6.29e-11;18!CL:0002419;6.29e-11;18!CL:0000624;3.74e-09;6!CL:0000898;1.38e-08;3!CL:0000084;1.04e-07;25!CL:0002032;4.68e-07;1!CL:0000037;4.68e-07;1!CL:0001024;4.68e-07;1!CL:0000557;4.68e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,4.23e-18,3;CL:0000815,7.54e-13,2;CL:0000792,7.54e-13,2;CL:0002677,7.54e-13,2;CL:0000791,4.33e-11,18;CL:0000789,4.33e-11,18;CL:0002420,4.33e-11,18;CL:0002419,4.33e-11,18;CL:0000790,4.33e-11,18;CL:0000624,3.51e-09,6;CL:0000898,7.48e-09,3;CL:0000084,7.99e-08,25;CL:0000827,7.99e-08,25;CL:0001024,7.29e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;6.29e-11;18!UBERON:0010226;4.68e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.85e-19!115;UBERON:0001049!1.66e-08!57;UBERON:0005068!1.66e-08!57;UBERON:0006241!1.66e-08!57;UBERON:0007135!1.66e-08!57;UBERON:0000955!1.83e-08!69;UBERON:0006238!1.83e-08!69;UBERON:0003080!1.07e-07!42;UBERON:0001893!1.79e-07!34;UBERON:0002616!2.41e-07!59;UBERON:0002791!4.45e-07!33;UBERON:0002780!4.45e-07!41;UBERON:0001890!4.45e-07!41;UBERON:0006240!4.45e-07!41;UBERON:0001017!4.50e-07!82;UBERON:0002020!7.29e-07!34;UBERON:0003528!7.29e-07!34;UBERON:0002390!8.37e-07!102;UBERON:0003061!8.37e-07!102;UBERON:0001869!8.68e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.91e-12;2!UBERON:0005058;1.91e-12;2!UBERON:0009113;1.91e-12;2!UBERON:0002390;4.55e-09;32!UBERON:0002084;4.68e-07;1!UBERON:0002082;4.68e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,4.85e-07,1;UBERON:0002082,4.85e-07,1;UBERON:0010226,4.85e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0.251085279189606,0,0.164201178899891,0.236132343941038,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0.387336002901508,0.142169232487422,1.17440175733939,1.10799081706375,0.401088894940283,0.868043482863407,0.447830948479849,0.32389366601898,0.515151135268373,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0,0.512321413058201,0,0.344745680736619,0,0,0.376484679085209,0,0.898893937780338,0.306083892370903,0,0,1.31940520074686,0.797854630486527,0,0,0,0,0.502497330513487,0,0.217188844705117,0,0,0,0.422510572623884,0.212604299965044,0.419317291016752,0.898629049171961,0.901061357049038,0.964353520182481,0,0.59675003159727,0.547992461293902,3.51992488922645,0,0.889509253863555,0.853460445133014,0.400395987036012,0.574752439954483,0.661044872784862,0,0,1.17447437874188,0.382273228125229,1.32171328579026,0,1.31692042387539,0.786839080455332,0,1.02800749499755,0.668745981562712,1.62961133316795,1.4203434172042,0,0.222820913770347,1.47302953737419,0.664601683750863,0.270803863765016,0.512365278902701,0.650296737799391,0.164437904603676,0.552700035571697,0.289803085735052,1.33457906845854,2.1403266247177,2.09071047609954,0.679856056185397,0.766440987203842,1.37450978193052,0.506039384039006,0,1.95325036156926,0.950452044448374,0.602300476311091,0.895906278080929,0,1.89421801635213,0,0.80642697289893,0.534880391567015,1.15859523106239,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0,0,0,0.458426764241994,0,0,0,0,0,1.66943437013739,1.14398982156026,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0.0974370051611986,0.252433774244115,0.0920498986422993,0.323292113637624,0,0,0,0,0,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0.720599767084807,0.6312121671319,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,0.197030760201927,0.646882724578552,0.513372145118994,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,1.03384013061444,0,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.309123034943167,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0.229723400206959,1.01489521846434,0,0,1.42939065274673,1.64544909234478,0,0,0,0,0,0.245040215981032,0,0,0.711418433484141,0.478278818186467,0,0.383010740264733,0.211673582723883,0,1.40398589056729,0.456469358066384,0,0,0,0,0,0,0.343505344755765,0.307240764308458,0.223676107892416,0,0,0,0,0,0.66614393599564,0,0,0.293016358543788,0,0.111443384277478,0,0,0.296964680832639,0,0,0.422008249231538,0.111308705022906,0.16480387422676,0,0.398495976502139,0.552567831062295,0.755798243562828,0.102268682502155,0.492339221844278,0.311039587661807,0,0,0.511572370226872,0.690503839458535,0,0,0.969332746095218,0.185536196323703,3.99227596002388,0,0,2.17499872630438,0,0,0,0.344743373241465,0,0,0.885741385813839,0.241192877250816,0,0.221158519862449,0.295547618953547,0,0,0,0.384751292518985,0,0,0,0,0,0.274792780205587,0.533034776018635,0,0,0.664846727600626,0,0,0,0,0.476809736941136,0,0,0,0.649165919226273,0,0.530745387020035,1.83309043480088,0,0,0,0.269604531922708,0.802577647298789,0.234264445725339,0,0,0,0.789168805698781,0,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0.253243183823515,0,0,0,0.19980960958213,0.144090417154106,0,0.514784993585894,0,0,0.235694034616795,0,0,0.203996435272644,0.288950589901519,0.600420288709789,0.273810757783986,1.27746588066972,0,0,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0.470284307407084,0,0,0.236349546921671,0,0.202210631562555,0,0.254019996197353,0,0.272406812223151,0.160753148465019,0.275078873194468,0,0.449947783103001,0,0.303747783290123,0,0.236417121897595,0.209818352539992,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0.164185041498678,0,0,0.293104467356165,0,0.646414781807753,0,0,0,0.533937062838473,0.628817220398664,0,0,0.395223263795889,0,0,0,0.2506898940227,0,0,0,0.886068179966986,0.244052529803926,0.3755727921195,0.573409195690071,0.332787154610557,0.124192805882767,0.276697269872462,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.490696182767533,0.655219697692825,0,0,0,0.320075189082423,0.172214979660816,0,0,0,0,0.255788742607303,0,0,0.436838552768056,0,0,0,0,0,0.70975570501128,0,0.352675943690684,0,0.706521476061055,1.41696576325585,0,0.205116364240755,0,0.276629009856872,0.484426936895553,0,0,0,0,0,0,0,0,0.300841313397029,0,0.781514011233092,0,0,0.147856086217045,0.337687923091973,0,0.206686796501184,0.0634158101939068,0.546974809018219,0,0,0.175871244359621,0.127762427639595,0,0,0,0.455324382702595,0.0887023701626388,0.115233987555779,0.514464028312255,0.135939465953663,0.131545547125698,0,0,0.313972371402056,0.471346769748006,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0.223710863595585,0,0,0,0.102662806856247,0,0,0.233939463462106,0.198950775161368,0,0.11294608203896,0.329821550236287,0,0.617393264863557,0.437119121007915,0.940634592723046,0.245148321753905,0,0.196308467114945,0,0,0,0.563903507879121,0.45120521581504,0,0,0,0,0,0.917458566809082,0.286679166302903,0,0.271965960763659,0,0,0,0,0,0,0.109265571963696,0,0,0.26721740526556,0,0,0.0757786982182394,0,0,0.413731983447581,0.426467963801962,0,1.16260037704811,1.42771842880473,0,0.0636471582781649,0,0,0,0.134704106029175,0,0,0,0.320182037633146,0,0,0,0.244482888365733,0,0,1.20764276154616,0 | |||
|short_description=p4@N4BP2L1 | |||
}} |
Revision as of 17:16, 11 January 2014
Short description: | p4@N4BP2L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_N4BP2L1_5end |
Coexpression cluster: | NA |
Association with transcript: | -107bp_to_ENST00000380130, NM_001079691, NM_052818, uc001uuc.2, uc001uud.2, uc001uuf.2, uc010tdy.1_5end |
EntrezGene: | N4BP2L1 |
HGNC: | 25037 |
UniProt: | Q5TBK1Q9UQP6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 4.23e-18 | 3 |
regulatory T cell | 7.54e-13 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 7.54e-13 | 2 |
naive regulatory T cell | 7.54e-13 | 2 |
mature alpha-beta T cell | 4.33e-11 | 18 |
alpha-beta T cell | 4.33e-11 | 18 |
immature T cell | 4.33e-11 | 18 |
mature T cell | 4.33e-11 | 18 |
immature alpha-beta T cell | 4.33e-11 | 18 |
CD4-positive, alpha-beta T cell | 3.51e-09 | 6 |
naive T cell | 7.48e-09 | 3 |
T cell | 7.99e-08 | 25 |
pro-T cell | 7.99e-08 | 25 |
CD34-positive, CD38-negative hematopoietic stem cell | 7.29e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 4.85e-07 | 1 |
cardiac ventricle | 4.85e-07 | 1 |
future cardiac ventricle | 4.85e-07 | 1 |