FFCP PHASE1:Hg19::chr13:76334880..76334887,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4008 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6646 | |||
|TSSclassifier=strong | |||
|UniProt=E9PLH4,Q8WWI1 | |||
|association_with_transcript=83bp_to_ENST00000465261,NM_015842,uc001vjv.2_5end | |||
|coexpression_cluster_id=C3384 | |||
|description=CAGE_peak_34_at_LMO7_5end | |||
|id=chr13:76334880..76334887,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.29e-13!254;CL:0000223!1.17e-12!59;CL:0002076!4.16e-08!43 | |||
|ontology_enrichment_celltype_v019=CL:0000182;9.55e-15;12!CL:0002178;1.00e-10;3!CL:0002379;2.05e-08;1!CL:0002563;5.23e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.79e-15,12;CL:0000223,5.50e-13,58;CL:0002178,7.14e-11,3;CL:0002379,1.71e-08,1;CL:0002563,5.06e-08,4;CL:0000066,1.68e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0001041;2.81e-22;30!UBERON:0009497;4.40e-19;13!UBERON:0004161;1.72e-10;11!UBERON:0006595;1.57e-08;86!UBERON:0006242;2.05e-08;1!CL:0000223;1.23e-07;58 | |||
|ontology_enrichment_disease=DOID:305!1.67e-23!106;DOID:0050687!2.48e-14!143;DOID:299!1.95e-08!25;DOID:162!4.87e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:3493;4.95e-16;2!DOID:4929;1.61e-15;2!DOID:299;2.18e-13;25!DOID:3119;1.62e-08;14!DOID:3620;2.05e-08;1!DOID:3111;2.05e-08;1!DOID:3565;2.05e-08;1!DOID:3603;2.05e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,5.56e-16,2;DOID:4929,8.66e-16,2;DOID:305,3.52e-14,106;DOID:299,1.78e-13,25;DOID:0050687,1.01e-09,143;DOID:3119,1.30e-08,14;DOID:3620,1.71e-08,1;DOID:3565,1.71e-08,1;DOID:3111,3.79e-08,1;DOID:3603,3.79e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.08e-25!155;UBERON:0001555!1.08e-25!155;UBERON:0007026!1.08e-25!155;UBERON:0004119!1.17e-25!169;UBERON:0000925!1.17e-25!169;UBERON:0006595!1.17e-25!169;UBERON:0004921!2.45e-24!129;UBERON:0004185!2.45e-24!129;UBERON:0000077!5.02e-23!130;UBERON:0001041!4.48e-22!98;UBERON:0000065!2.82e-20!53;UBERON:0001004!1.83e-19!72;UBERON:0005911!1.95e-16!82;UBERON:0008947!2.88e-16!38;UBERON:0003258!2.88e-16!38;UBERON:0000072!2.31e-13!46;UBERON:0003104!3.58e-13!238;UBERON:0009142!3.58e-13!238;UBERON:0009497!3.15e-12!25;UBERON:0000015!3.15e-12!25;UBERON:0002423!3.15e-12!25;UBERON:0006235!3.15e-12!25;UBERON:0004161!3.15e-12!25;UBERON:0003929!7.25e-12!54;UBERON:0002294!3.33e-11!7;UBERON:0001173!3.33e-11!7;UBERON:0004912!3.33e-11!7;UBERON:0005177!3.94e-11!107;UBERON:0001048!4.17e-11!168;UBERON:0000466!4.37e-11!126;UBERON:0000481!6.82e-11!347;UBERON:0007499!2.00e-10!25;UBERON:0001557!3.12e-10!19;UBERON:0009856!6.64e-10!26;UBERON:0005181!7.62e-10!35;UBERON:0001737!7.62e-10!9;UBERON:0009569!3.50e-09!113;UBERON:0005153!3.90e-09!37;UBERON:0005178!9.26e-09!34;UBERON:0002224!9.26e-09!34;UBERON:0008835!2.22e-08!22;UBERON:0003894!2.22e-08!22;UBERON:0009854!6.49e-08!23;UBERON:0002048!7.66e-08!22;UBERON:0000117!7.66e-08!22;UBERON:0000171!7.66e-08!22;UBERON:0000170!7.66e-08!22;UBERON:0005597!7.66e-08!22;UBERON:0000118!7.66e-08!22;UBERON:0000062!3.39e-07!511;UBERON:0002110!4.11e-07!3;UBERON:0006242!4.11e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;8.40e-27;25!UBERON:0002294;2.37e-25;7!UBERON:0001173;2.37e-25;7!UBERON:0002394;8.55e-17;4!UBERON:0003928;8.55e-17;4!UBERON:0000945;1.29e-13;5!UBERON:0010039;1.29e-13;5!UBERON:0000058;1.12e-11;10!UBERON:0005409;8.40e-11;22!UBERON:0002110;2.16e-10;3!UBERON:0002107;3.00e-09;19!UBERON:0006925;3.00e-09;19!UBERON:0002171;8.13e-09;1!UBERON:0004913;8.13e-09;1!UBERON:0003703;8.13e-09;1!UBERON:0006518;8.13e-09;1!UBERON:0008949;8.13e-09;1!UBERON:0000101;8.13e-09;1!UBERON:0002167;8.13e-09;1!UBERON:0001174;8.13e-09;1!UBERON:0004914;8.13e-09;1!UBERON:0002048;3.50e-08;22!UBERON:0000117;3.50e-08;22!UBERON:0000171;3.50e-08;22!UBERON:0000170;3.50e-08;22!UBERON:0001242;5.23e-08;4!UBERON:0001262;5.23e-08;4!UBERON:0004786;5.23e-08;4!UBERON:0004808;5.23e-08;4!UBERON:0001277;5.23e-08;4!UBERON:0004921;8.19e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,7.57e-27,25;UBERON:0000015,7.57e-27,25;UBERON:0002423,7.57e-27,25;UBERON:0006235,7.57e-27,25;UBERON:0004161,7.57e-27,25;UBERON:0005911,6.39e-25,82;UBERON:0007499,1.27e-21,25;UBERON:0009856,9.69e-21,26;UBERON:0003929,6.78e-20,54;UBERON:0002294,1.02e-19,9;UBERON:0001173,1.02e-19,9;UBERON:0004912,1.02e-19,9;UBERON:0008835,1.05e-19,22;UBERON:0003894,1.05e-19,22;UBERON:0009854,8.43e-19,23;UBERON:0004921,2.91e-18,118;UBERON:0001041,3.63e-18,87;UBERON:0001007,7.54e-18,145;UBERON:0001555,7.54e-18,145;UBERON:0007026,7.54e-18,145;UBERON:0004119,8.10e-16,160;UBERON:0000925,8.10e-16,160;UBERON:0006595,8.10e-16,160;UBERON:0002394,2.39e-11,6;UBERON:0003928,2.39e-11,6;UBERON:0002110,1.87e-10,3;UBERON:0006242,1.87e-10,3;UBERON:0005177,1.24e-09,101;UBERON:0005409,1.42e-09,25;UBERON:0002107,2.85e-09,19;UBERON:0006925,2.85e-09,19;UBERON:0008836,2.85e-09,19;UBERON:0002171,7.56e-09,1;UBERON:0006518,7.56e-09,1;UBERON:0008949,7.56e-09,1;UBERON:0000101,7.56e-09,1;UBERON:0002167,7.56e-09,1;UBERON:0000945,8.12e-09,8;UBERON:0010039,8.12e-09,8;UBERON:0004913,8.15e-09,1;UBERON:0003703,8.15e-09,1;UBERON:0001174,8.15e-09,1;UBERON:0004914,8.15e-09,1;UBERON:0001048,2.18e-08,160;UBERON:0002048,3.59e-08,22;UBERON:0000117,3.59e-08,22;UBERON:0000171,3.59e-08,22;UBERON:0000170,3.59e-08,22;UBERON:0005597,3.59e-08,22;UBERON:0000118,3.59e-08,22;UBERON:0001242,5.06e-08,4;UBERON:0001262,5.06e-08,4;UBERON:0004786,5.06e-08,4;UBERON:0004808,5.06e-08,4;UBERON:0001277,5.06e-08,4;UBERON:0011216,7.75e-08,223;UBERON:0002100,3.42e-07,199;UBERON:0009569,4.37e-07,112;UBERON:0000490,8.72e-07,148 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.220587945464788,0.435758888184812,0.237270619111097,0.269662616320329,0.588664395376038,0.38474715694639,0,0,0,0,2.53510069643662,0.982827216677626,1.18157981336281,0,1.22988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,1.19372242368845,0,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,1.3480252672099,1.25314822272926,0,0,0,0,0,0,0,0,0,0,0.1137934482855,1.01701460117107,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0.139423744278603,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55488378577335,0,0,0.353830258013357,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,0.0979923974143777,0,0,0,0.0967563312890851,0.0730893170861856,0.246346371159628,0.678923115418936,0,0,0,0,0,1.17330829640882,0.160317640503067,1.92107695265417,0,1.72908500584927,0,0,0.576219191952599,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,1.6544468284517,1.40106959247983,1.28066733322951,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0.0788057072991982,0.104909176269996,0.422401346077626,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,1.71086837884329,0,3.41719720216623,8.48903247538196,2.48543433208317,0,0,0,0,0,0,0,0,0.785270481251171,0,0,0,0,0,0,0,0,0,0,1.41159491818903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05656061679314,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0.252071696221718,0,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0,0,0,0,0,2.21784129325568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,2.00929529502746,0.111231401892069,0,0.157115589916002,0.280272163313789,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0.4582137370881,0,0,0.559277158988962,3.14080747568778,2.07260472469858,0.647428837187895,0.615976841137482,0,0,0,0,0,0.11294608203896,0,0,0.848915739187391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,1.46067277649303,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27940389140589,0,0,0.186224142887574,0,0.0636471582781649,0,0.870866991587845,0.342233301085281,0.26940821205835,0.573777643141411,0.332660356546013,0,0,0,1.88632924423832,0,0,0,0,0,0 | |||
|short_description=p34@LMO7 | |||
}} |
Revision as of 18:05, 11 January 2014
Short description: | p34@LMO7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_LMO7_5end |
Coexpression cluster: | C3384_lung_amniotic_signet_papillotubular_prostate_gall_Hepatocyte |
Association with transcript: | 83bp_to_ENST00000465261, NM_015842, uc001vjv.2_5end |
EntrezGene: | LMO7 |
HGNC: | 6646 |
UniProt: | E9PLH4Q8WWI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.79e-15 | 12 |
endodermal cell | 5.50e-13 | 58 |
epithelial cell of stomach | 7.14e-11 | 3 |
meningothelial cell | 1.71e-08 | 1 |
intestinal epithelial cell | 5.06e-08 | 4 |
epithelial cell | 1.68e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 5.56e-16 | 2 |
tubular adenocarcinoma | 8.66e-16 | 2 |
carcinoma | 3.52e-14 | 106 |
adenocarcinoma | 1.78e-13 | 25 |
cell type cancer | 1.01e-09 | 143 |
gastrointestinal system cancer | 1.30e-08 | 14 |
central nervous system cancer | 1.71e-08 | 1 |
meningioma | 1.71e-08 | 1 |
cystadenocarcinoma | 3.79e-08 | 1 |
mucinous cystadenocarcinoma | 3.79e-08 | 1 |