FFCP PHASE1:Hg19::chr16:55519314..55519342,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C351 | |||
|description=CAGE_peak_at_chr16:55519314..55519342,- | |||
|id=chr16:55519314..55519342,- | |||
|ontology_enrichment_celltype=CL:0000055!7.35e-35!180;CL:0000680!4.33e-18!57;CL:0000056!4.33e-18!57;CL:0000355!4.33e-18!57;CL:0000183!6.20e-17!59;CL:0000187!2.19e-16!54;CL:0000192!7.58e-16!42;CL:0000514!7.58e-16!42;CL:0000057!1.98e-15!75;CL:0000393!4.59e-14!60;CL:0000211!4.59e-14!60;CL:0002371!9.85e-13!591;CL:0000222!3.63e-12!119;CL:0000144!1.92e-11!625;CL:0000359!8.80e-11!32;CL:0000048!1.90e-10!430;CL:0000723!6.22e-10!436;CL:0000034!3.45e-09!444;CL:0002539!3.24e-08!10;CL:0002620!3.39e-08!23;CL:0000220!3.64e-08!246;CL:0002321!6.94e-08!248 | |||
|ontology_enrichment_celltype_v019=CL:0000134;3.20e-09;55!CL:0000048;4.93e-08;58!CL:0000569;7.06e-08;4!CL:0002494;2.69e-07;16!CL:1000306;2.74e-07;4!CL:0002547;2.74e-07;4!CL:0000135;2.75e-07;3!CL:0000388;2.75e-07;3!CL:0000723;7.03e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.91e-15,427;CL:0000723,1.02e-14,433;CL:0000034,5.17e-14,441;CL:0000057,1.02e-11,76;CL:0002320,1.68e-10,361;CL:0000680,9.74e-09,58;CL:0000056,9.74e-09,58;CL:0000355,9.74e-09,58;CL:0000192,1.20e-08,43;CL:0000514,1.20e-08,43;CL:0000134,1.57e-08,354;CL:0000569,6.91e-08,4;CL:0000011,6.91e-08,4;CL:0000187,1.52e-07,55;CL:0002494,2.20e-07,16;CL:0000135,2.90e-07,3;CL:0000388,2.90e-07,3;CL:0000219,3.64e-07,386;CL:1000306,3.91e-07,4;CL:0002547,3.91e-07,4;CL:0002539,8.08e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000011;7.06e-08;4 | |||
|ontology_enrichment_disease=DOID:2394!8.34e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.93e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.30e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.13e-19!83;UBERON:0002329!1.13e-19!83;UBERON:0003077!1.13e-19!83;UBERON:0003059!1.13e-19!83;UBERON:0007282!1.13e-19!83;UBERON:0009618!1.13e-19!83;UBERON:0007285!1.13e-19!83;UBERON:0004290!8.57e-18!70;UBERON:0000486!2.94e-17!82;UBERON:0001134!8.98e-17!61;UBERON:0002036!8.98e-17!61;UBERON:0003082!8.98e-17!61;UBERON:0004573!1.81e-16!33;UBERON:0004571!1.81e-16!33;UBERON:0002385!1.87e-16!63;UBERON:0001015!1.87e-16!63;UBERON:0000383!1.87e-16!63;UBERON:0001637!3.46e-16!42;UBERON:0003509!3.46e-16!42;UBERON:0004572!3.46e-16!42;UBERON:0004872!1.50e-14!84;UBERON:0001981!2.98e-13!60;UBERON:0007500!2.98e-13!60;UBERON:0004537!2.98e-13!60;UBERON:0006965!2.98e-13!60;UBERON:0005256!6.33e-13!143;UBERON:0000947!1.17e-12!21;UBERON:0010191!1.17e-12!21;UBERON:0002049!1.93e-12!79;UBERON:0007798!1.93e-12!79;UBERON:0000055!1.38e-11!69;UBERON:0000490!1.12e-10!138;UBERON:0004535!1.76e-10!110;UBERON:0001009!1.04e-09!113;UBERON:0003914!1.69e-09!118;UBERON:0001135!5.39e-09!15;UBERON:0002100!2.19e-08!216;UBERON:0004237!3.24e-08!10;UBERON:0004695!3.24e-08!10;UBERON:0002111!3.24e-08!10;UBERON:0004178!3.24e-08!10;UBERON:0002199!4.91e-08!45;UBERON:0002416!4.91e-08!45;UBERON:0003102!2.79e-07!95;UBERON:0000475!6.81e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.93e-12;33!UBERON:0004571;1.93e-12;33!UBERON:0000947;3.38e-10;21!UBERON:0010191;3.38e-10;21!UBERON:0001637;1.08e-08;42!UBERON:0003509;1.08e-08;42!UBERON:0004572;1.08e-08;42!UBERON:0001135;1.69e-08;15!UBERON:0004457;1.55e-07;9!UBERON:0000042;1.55e-07;9!UBERON:0002119;1.94e-07;4!UBERON:0004797;2.74e-07;4!UBERON:0000415;2.74e-07;4!UBERON:0007240;2.74e-07;4!UBERON:0005742;2.74e-07;4!UBERON:0005734;2.74e-07;4!UBERON:0004664;2.74e-07;4!UBERON:0004663;2.74e-07;4!UBERON:0007846;2.75e-07;3!UBERON:0000043;2.75e-07;3!UBERON:0007845;2.75e-07;3!UBERON:0002384;6.82e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,3.78e-13,33;UBERON:0004571,3.78e-13,33;UBERON:0001637,1.44e-10,42;UBERON:0003509,1.44e-10,42;UBERON:0004572,1.44e-10,42;UBERON:0002384,2.69e-10,371;UBERON:0000947,4.09e-10,21;UBERON:0010191,4.09e-10,21;UBERON:0007524,2.83e-09,73;UBERON:0002329,9.78e-09,71;UBERON:0003059,9.78e-09,71;UBERON:0007282,9.78e-09,71;UBERON:0004290,9.78e-09,71;UBERON:0009618,9.78e-09,71;UBERON:0000926,1.44e-08,315;UBERON:0004120,1.44e-08,315;UBERON:0006603,1.44e-08,315;UBERON:0003077,1.58e-08,72;UBERON:0007285,1.58e-08,72;UBERON:0001135,2.12e-08,15;UBERON:0000486,2.51e-08,83;UBERON:0004872,2.60e-08,83;UBERON:0007503,4.17e-08,78;UBERON:0001134,8.02e-08,62;UBERON:0002036,8.02e-08,62;UBERON:0003082,8.02e-08,62;UBERON:0002119,1.12e-07,4;UBERON:0002385,2.07e-07,64;UBERON:0001015,2.07e-07,64;UBERON:0000383,2.07e-07,64;UBERON:0007846,2.90e-07,3;UBERON:0000043,2.90e-07,3;UBERON:0007845,2.90e-07,3;UBERON:0000415,3.91e-07,4;UBERON:0007240,3.91e-07,4;UBERON:0005742,3.91e-07,4;UBERON:0005734,3.91e-07,4;UBERON:0004664,3.91e-07,4;UBERON:0004663,3.91e-07,4;UBERON:0007500,5.92e-07,59;UBERON:0001981,5.92e-07,59;UBERON:0004537,5.92e-07,59;UBERON:0006965,5.92e-07,59;UBERON:0004237,8.08e-07,10;UBERON:0004695,8.08e-07,10;UBERON:0002111,8.08e-07,10;UBERON:0004178,8.08e-07,10 | |||
|phase1_expression=1.45342703416445,1.92690471501885,1.40954404095971,3.00219895059391,6.25745532198203,0.872338524100369,0,0.631719873426831,2.87304191019822,0,0,0,0.263766978228454,1.11389717664042,0.662794751455832,2.6893005858071,4.21886169616784,8.76372108464848,6.8310591830671,0.369363174230364,1.02000345622126,0.626909442956176,0.572471974262113,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.383587685530591,1.80719576192283,0,0.869079113764942,0,4.37971383272372,0,0.221729397462564,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,1.04142150482278,0.56530794192401,2.09749718104953,0.275118041940067,0.417989933073621,0,0,0,0,0,0.976248230192678,0.367663080345869,2.43042584364528,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,3.97577561356255,1.39293562831038,1.32409180813219,8.03142538096678,1.06400514659507,1.12135520028461,0,2.4666754841716,0,0.404132016209064,0.490385709340376,0.151357427644931,0.576175924479999,0,0.312160076830321,0,1.19558944441441,0,0.161872944368132,0.280901613404497,0,0.368502951935304,0.206651562351531,4.75201142912821,3.70900393917835,0,0.718618141816238,0.505008341862199,0.125118519871964,0,0.438977620880838,1.83892677479412,3.45547535485173,0,1.07633781413317,1.06778694409284,1.48352330811693,0.900273288253207,0.618315175430633,2.31876486041066,0.558350568994769,1.5189869901714,0.389748020644795,2.27190396819703,0.920498986422993,0.161646056818812,1.06502877754984,0.403008392910561,0.508681776931463,0,0,0,0,0,0,0.10366105501537,0,0,3.12899064659632,9.00537313470039,0,2.3218396401599,2.88751792667834,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,3.4214489204541,0.411309970813294,0,0,0,0,0.07333828582095,1.29271715757778,0,0,1.59562869950922,2.08014873822732,0,0,0,0.285955987316295,0.542621605391443,0,0.325736184293735,0.355391948742546,1.58390374586686,0,0,0.199945982364114,0,0,0,0,0,0,0.723906533337896,2.4657158706046,1.25342674267927,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,2.00068208423871,1.08506009479894,0.207970861530807,0.535286966391485,2.36553622550902,0.702848489956279,0.902838299183157,0,5.17365356462525,1.32845119707087,0.368738337083406,0.60818530127658,1.17480694477644,2.74514739048685,0,0,0,0.303127571446259,0,0.30239029332968,1.24053903909388,0.920771839728375,5.61320188866147,0.768834895534206,0,2.0911009748669,0,1.54209693802656,2.48586415438378,0.657017248110473,0,3.37010097533882,0,0.200506470303285,0,0.68888668898764,1.63882051206045,1.44236856455367,0,0,0,0,0.105551628892876,0,0,0.431831832204279,0,0,1.00337954770971,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0,0,0,0,2.32009723901093,0,0,0.413509717453592,0.107420244868274,0.580066775656914,0.340906509664404,0.712256285173899,0,0,0,0,1.85938219718914,4.09256050879832,0.6970372701606,0.616067160352178,0.532306030317022,0.869932992075073,1.11194531462352,0,0.744316738719335,0,0.571890581771475,0.255897791311334,0.42793898803392,0.318203247925937,0.78494864019923,1.2591072030832,1.09814811894422,1.06031162111118,0,1.58510321173008,1.68503382495592,0.975267478179181,1.94970791705028,4.22600587027022,0.9554993798559,1.69686518344455,0,0.551365343546124,1.32687795048244,0.876901770507525,1.15755106853338,1.31178950409327,0.202910376962704,0,0.563391205064483,0,0.392996164052485,0.35667105148125,0.709522128141196,5.48879851773927,16.1354497550352,0.379473173765715,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.796991953004279,0,0,0.613612095012929,0,1.24415835064723,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,1.25336261431701,0,0.179515288819544,0.217294743844016,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.63186579628488,0,0,0,0,0,0,0,0.416024019039416,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0,0.274083849293502,0.19871461170299,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0.305994652908965,0.577901179803038,0,0,0,1.28929632425987,0,0.558564802544508,0,0,0,0,0,0.134366944973453,3.96329871896644,0,0.0787831823072236,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.314727528809989,0,0,0,0,0,0,1.08599920350743,0.864221491201268,1.95952416065645,0,0,0.511164065356265,0.113312091520126,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,1.64180283175561,1.8697064787778,0.554805861502613,3.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| |||
|short_description=p@chr16:55519314..55519342,- | |||
}} |
Revision as of 03:38, 12 January 2014
Short description: | p@chr16:55519314..55519342, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr16:55519314..55519342, - |
Coexpression cluster: | C351_Fibroblast_Smooth_mesenchymal_Adipocyte_tenocyte_Synoviocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.91e-15 | 427 |
somatic stem cell | 1.02e-14 | 433 |
stem cell | 5.17e-14 | 441 |
fibroblast | 1.02e-11 | 76 |
connective tissue cell | 1.68e-10 | 361 |
muscle precursor cell | 9.74e-09 | 58 |
myoblast | 9.74e-09 | 58 |
multi-potent skeletal muscle stem cell | 9.74e-09 | 58 |
smooth muscle cell | 1.20e-08 | 43 |
smooth muscle myoblast | 1.20e-08 | 43 |
mesenchymal cell | 1.57e-08 | 354 |
cardiac mesenchymal cell | 6.91e-08 | 4 |
migratory trunk neural crest cell | 6.91e-08 | 4 |
muscle cell | 1.52e-07 | 55 |
cardiocyte | 2.20e-07 | 16 |
fibrocyte | 2.90e-07 | 3 |
tendon cell | 2.90e-07 | 3 |
motile cell | 3.64e-07 | 386 |
fibroblast of tunica adventitia of artery | 3.91e-07 | 4 |
fibroblast of the aortic adventitia | 3.91e-07 | 4 |
aortic smooth muscle cell | 8.08e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.30e-11 | 14 |