FFCP PHASE1:Hg19::chr16:67063211..67063240,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=865 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1539 | |||
|TSSclassifier=strong | |||
|UniProt=Q13951 | |||
|association_with_transcript=161bp_to_ENST00000290858,ENST00000412916,NM_001755,NM_022845,uc002era.2,uc002erb.2,uc010vja.1_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_2_at_CBFB_5end | |||
|id=chr16:67063211..67063240,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.17e-12!57;UBERON:0005068!5.17e-12!57;UBERON:0006241!5.17e-12!57;UBERON:0007135!5.17e-12!57;UBERON:0001017!8.87e-12!82;UBERON:0000955!8.88e-12!69;UBERON:0006238!8.88e-12!69;UBERON:0003075!1.38e-11!86;UBERON:0007284!1.38e-11!86;UBERON:0000073!3.14e-11!94;UBERON:0001016!3.14e-11!94;UBERON:0002346!3.66e-11!90;UBERON:0005743!4.78e-11!86;UBERON:0000062!5.88e-11!511;UBERON:0003080!2.25e-10!42;UBERON:0007023!3.50e-10!115;UBERON:0002780!3.57e-10!41;UBERON:0001890!3.57e-10!41;UBERON:0006240!3.57e-10!41;UBERON:0002616!1.03e-09!59;UBERON:0000033!1.24e-08!123;UBERON:0000153!1.47e-08!129;UBERON:0007811!1.47e-08!129;UBERON:0003056!3.14e-08!61;UBERON:0000468!4.49e-08!659;UBERON:0000467!8.35e-08!625;UBERON:0000480!9.26e-08!626;UBERON:0004121!2.73e-07!169;UBERON:0002050!3.12e-07!605;UBERON:0005423!3.12e-07!605;UBERON:0000924!3.60e-07!173;UBERON:0006601!3.60e-07!173;UBERON:0001893!4.08e-07!34;UBERON:0000923!4.20e-07!604;UBERON:0005291!4.20e-07!604;UBERON:0006598!4.20e-07!604;UBERON:0002532!4.20e-07!604;UBERON:0002020!4.78e-07!34;UBERON:0003528!4.78e-07!34;UBERON:0000922!6.12e-07!612;UBERON:0002791!6.65e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.54e-08;41!UBERON:0001890;5.54e-08;41!UBERON:0000073;6.87e-07;53!UBERON:0002616;6.87e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.54e-12,56;UBERON:0005068,7.54e-12,56;UBERON:0006241,7.54e-12,56;UBERON:0007135,7.54e-12,56;UBERON:0001016,9.46e-12,89;UBERON:0001017,1.21e-11,81;UBERON:0000955,1.30e-11,68;UBERON:0006238,1.30e-11,68;UBERON:0003075,4.38e-11,82;UBERON:0007284,4.38e-11,82;UBERON:0000073,6.64e-11,53;UBERON:0002616,6.64e-11,53;UBERON:0002346,1.19e-10,86;UBERON:0002780,3.23e-10,41;UBERON:0001890,3.23e-10,41;UBERON:0003080,3.23e-10,41;UBERON:0006240,3.23e-10,41;UBERON:0010314,3.38e-10,132;UBERON:0007023,4.76e-10,114;UBERON:0003056,1.68e-08,61;UBERON:0001893,3.75e-07,34;UBERON:0003528,4.39e-07,34;UBERON:0002020,4.39e-07,34 | |||
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| |||
|short_description=p2@CBFB | |||
}} |
Revision as of 11:51, 20 January 2014
Short description: | p2@CBFB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CBFB_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 161bp_to_ENST00000290858, ENST00000412916, NM_001755, NM_022845, uc002era.2, uc002erb.2, uc010vja.1_5end |
EntrezGene: | CBFB |
HGNC: | 1539 |
UniProt: | Q13951 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 7.54e-12 | 56 |
neural rod | 7.54e-12 | 56 |
future spinal cord | 7.54e-12 | 56 |
neural keel | 7.54e-12 | 56 |
nervous system | 9.46e-12 | 89 |
central nervous system | 1.21e-11 | 81 |
brain | 1.30e-11 | 68 |
future brain | 1.30e-11 | 68 |
neural plate | 4.38e-11 | 82 |
presumptive neural plate | 4.38e-11 | 82 |
regional part of nervous system | 6.64e-11 | 53 |
regional part of brain | 6.64e-11 | 53 |
neurectoderm | 1.19e-10 | 86 |
regional part of forebrain | 3.23e-10 | 41 |
forebrain | 3.23e-10 | 41 |
anterior neural tube | 3.23e-10 | 41 |
future forebrain | 3.23e-10 | 41 |
structure with developmental contribution from neural crest | 3.38e-10 | 132 |
adult organism | 4.76e-10 | 114 |
pre-chordal neural plate | 1.68e-08 | 61 |
telencephalon | 3.75e-07 | 34 |
brain grey matter | 4.39e-07 | 34 |
gray matter | 4.39e-07 | 34 |