FFCP PHASE1:Hg19::chr16:84651154..84651183,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23406 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18304 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AK026033_5end | |||
|description=CAGE_peak_5_at_COTL1_5end | |||
|id=chr16:84651154..84651183,- | |||
|ontology_enrichment_celltype=CL:0000766!4.94e-23!76;CL:0002057!1.83e-22!42;CL:0002194!3.43e-22!63;CL:0000576!3.43e-22!63;CL:0000040!3.43e-22!63;CL:0000559!3.43e-22!63;CL:0002009!5.88e-21!65;CL:0000860!6.49e-21!45;CL:0000839!1.01e-20!70;CL:0000557!1.95e-20!71;CL:0000144!3.69e-15!625;CL:0000548!1.68e-14!679;CL:0000004!1.68e-14!679;CL:0000255!1.68e-14!679;CL:0000012!1.05e-13!682;CL:0002371!1.49e-13!591;CL:0000763!1.64e-13!112;CL:0000049!1.64e-13!112;CL:0000222!2.81e-13!119;CL:0000003!1.47e-11!722;CL:0000213!2.42e-09!57;CL:0000215!2.42e-09!57;CL:0000738!5.88e-09!140;CL:0000048!1.08e-08!430;CL:0000063!1.53e-08!578;CL:0000723!1.91e-08!436;CL:0002087!4.17e-08!119;CL:0000034!1.45e-07!444;CL:0002031!2.07e-07!124;CL:0000220!8.58e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.59e-27;33!CL:0002057;2.59e-27;33!CL:0000576;4.64e-27;48!CL:0000473;2.66e-24;39!CL:0000234;2.66e-24;39!CL:0000766;3.72e-20;69!CL:0000763;2.52e-08;100!CL:0002393;4.29e-08;6!CL:0002397;4.29e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.42e-42,48;CL:0000234,1.42e-42,48;CL:0000860,2.81e-41,42;CL:0002057,2.81e-41,42;CL:0002194,7.29e-39,59;CL:0000576,7.29e-39,59;CL:0000040,7.29e-39,59;CL:0000559,7.29e-39,59;CL:0000766,1.24e-37,72;CL:0002009,4.30e-37,61;CL:0000839,1.09e-34,66;CL:0000557,6.10e-34,67;CL:0000763,2.04e-24,108;CL:0000049,2.04e-24,108;CL:0000738,5.12e-16,136;CL:0002087,1.01e-14,115;CL:0002031,2.35e-13,120;CL:0002393,1.86e-12,9;CL:0002397,1.86e-12,9;CL:0000048,2.09e-12,427;CL:0000723,2.64e-12,433;CL:0002032,9.77e-12,161;CL:0000837,9.77e-12,161;CL:0000034,1.46e-11,441;CL:0000037,2.44e-11,168;CL:0000988,1.18e-10,177;CL:0000134,1.12e-09,354;CL:0002320,1.62e-09,361;CL:0000222,1.01e-08,121;CL:0000219,2.69e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;4.92e-29;42!CL:0000049;2.56e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.87e-16!80;UBERON:0001474!2.35e-14!86;UBERON:0003081!9.54e-14!216;UBERON:0002204!1.12e-13!167;UBERON:0002193!2.92e-13!112;UBERON:0002390!1.37e-12!102;UBERON:0003061!1.37e-12!102;UBERON:0002405!1.64e-12!115;UBERON:0004765!2.82e-12!101;UBERON:0001434!2.82e-12!101;UBERON:0000926!8.17e-10!448;UBERON:0004120!8.17e-10!448;UBERON:0006603!8.17e-10!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.07e-30,76;UBERON:0001474,2.62e-27,82;UBERON:0002405,6.56e-25,93;UBERON:0004765,8.83e-25,90;UBERON:0001434,4.75e-24,100;UBERON:0002204,9.44e-22,167;UBERON:0002390,1.25e-21,98;UBERON:0003061,1.25e-21,98;UBERON:0003081,1.46e-20,203;UBERON:0002193,1.86e-20,108;UBERON:0000926,9.64e-17,315;UBERON:0004120,9.64e-17,315;UBERON:0006603,9.64e-17,315;UBERON:0002384,1.17e-08,371 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.704772020479856,0,0.446961094427288,0,0,1.26343974685366,0,0.245733936501509,2.09340350391728,0,0.263766978228454,0.495065411840187,0,0.672325146451775,0.602694528023977,0.730310090387373,1.95173119516203,0.738726348460727,0.816002764977012,0.626909442956176,0,0.821246550437305,0.502170558379211,0.458480434487708,0.492603536699674,0.157421562627358,0.786728553697808,0.383829398097213,1.39334510984468,0.919421224478927,0.90361775633475,0.739508020333575,0.154934401160603,0.142169232487422,0,1.10799081706375,1.60435557976113,1.95309783644267,2.91090116511902,2.59114932815184,1.28787783817093,3.63495596948912,5.29026321164333,5.82201746850759,4.41615170120801,5.75635043230556,2.47765096716083,3.45230870786581,5.12321413058201,0.945928919554341,3.44745680736619,0.645484683583826,0,5.64727018627814,1.91034305040492,0.674170453335254,2.75475503133812,2.24650318953266,1.91801137739712,3.95821560224059,3.78980949481101,1.70489900213078,4.35313857942876,2.26954089876456,1.24564449799115,3.51748131359441,2.08593167368081,1.95469960234605,1.21079900526674,1.10483290796269,1.26584954976354,2.5350634357433,5.10250319916104,1.46761051855863,2.02191536063691,1.35159203557356,0.803627933485401,4.56020389985998,3.77941686678271,1.82664153764634,0,0.546138611262131,0.889509253863555,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0.393010762749165,0.822405995998037,0.501559486172034,0,0,0,1.00269411196656,0.589211814949674,0.664601683750863,0.541607727530031,0.512365278902701,0.520237390239513,0.493313713811028,0.552700035571697,0,0,0.535081656179426,0,0.566546713487831,0.766440987203842,0,0.506039384039006,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.434473211648397,0,1.34140171940727,0.383587685530591,0.722878304769133,1.00267582127178,1.30361867064741,0,0,0.850813354476611,1.33037638477538,1.49319135678314,0.130979075497713,1.09288586487763,0.370784442784429,0.649094787309367,0.696518949197069,1.32957960518865,0.715471872916026,0,0,0.198762407366705,0,0.694281003215189,2.82653970962005,1.25849830862972,0.550236083880135,0.835979866147242,0.516833518338658,0,0,2.01414658554573,0.760272105718513,0.976248230192678,0,3.24056779152704,0.267899184852239,0.898117490504679,0.563057402416611,0,0,0.366403487860815,0,0,0.436094052142534,0,1.01304409331664,0,0.573673241497627,0,1.68203280042692,0,0.98667019366864,0.622422070799533,0.942974704487816,0,0.605429710579726,0,0.937285727335186,2.18512053781224,0.570471821544449,0.896692083310806,0.587172493218824,0.485618833104395,0.280901613404497,0.408308342509787,0.245668634623536,0.103325781175765,0,1.23633464639278,0.910161361938026,2.15585442544872,0.336672227908132,0.125118519871964,0,0,0.612975591598039,1.05166641234618,0,0.179389635688862,0,0.211931901159562,0,0.309157587715317,0,0.744467425326359,0,0.389748020644795,0,0,0.323292113637624,0,0.503760491138201,0.339121184620975,0.386521706326594,0,0.860413786167011,0.365921118388786,0,0.116193942869518,0.518305275076852,0,0.36497735907583,1.56449532329816,1.28648187638577,1.38134921352481,0,0,0.236613600079688,0.505754070234305,0.241011029883482,0.55146986366197,0.217879444092406,0.474541238222193,0.134831308160164,0,0,0.738155454624648,2.80483547606892,1.6462960453256,0,0,0,0,0,0.614942192715568,0.686271241194102,0.439001141634502,1.1240175325762,0.100528972411631,0.185176890317059,0,1.03993478527958,1.44331342025273,0.115930404975077,0.469634776943287,0.866198686566443,1.85194205030644,0.570762456703795,0,0,1.23108503043699,0.468008530278475,1.0404181360211,0,0.16798212819886,0.283550194484773,0.268675568108545,0.581267877027924,0.766765358330422,0.492663237895943,0.264145302039678,0.621984346622316,0.576479813667846,1.13618190083742,0,0.763976851116555,1.17217447210047,0,0.308482478109971,0.300343057843917,0,0.560655421726804,0.43596006883328,0.2933531432838,0.258543431515556,10.7296933755565,0,2.39344304926383,1.04007436911366,0,0,1.0656887160644,0.428933980974443,0.542621605391443,0,0.65147236858747,0,0,0.904318131178758,0.871533458600294,1.19967589418468,1.2162378064119,2.00902836572851,0,0.239624855491583,0,0,0.289562613335158,0.61642896765115,0.537182889719687,0.112085143993527,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0.502548796003046,0,1.49801404789436,11.966458368161,2.07207756718018,0.12269149171914,1.50051156317903,0.542530047399471,1.03985430765404,0.713715955188647,0.315404830067869,0.117141414992713,0.601892199455438,0,0,0,1.10621501125022,1.12948698808508,0.783204629850962,0,0.413536052245775,2.5885704098234,0.213455115606889,0,0,0.907170879989041,0.992431231275107,0,0.561320188866147,0.640695746278505,0,0.482561763430822,1.48418066444991,0.616838775210622,1.06537035187876,0.9033987161519,0,0.929683027679674,0.241718899183244,1.60405176242628,0.460404944679482,0.574072240823034,0.728364672026868,1.04899531967539,0.902399225814824,0.0770153371044148,1.56869953835371,0,0.316654886678627,1.13733384070897,1.53084334748864,0.4318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| |||
|short_description=p5@COTL1 | |||
}} |
Revision as of 12:33, 20 January 2014
Short description: | p5@COTL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_COTL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AK026033_5end |
EntrezGene: | COTL1 |
HGNC: | 18304 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.07e-30 | 76 |
bone element | 2.62e-27 | 82 |
immune system | 6.56e-25 | 93 |
skeletal element | 8.83e-25 | 90 |
skeletal system | 4.75e-24 | 100 |
musculoskeletal system | 9.44e-22 | 167 |
hematopoietic system | 1.25e-21 | 98 |
blood island | 1.25e-21 | 98 |
lateral plate mesoderm | 1.46e-20 | 203 |
hemolymphoid system | 1.86e-20 | 108 |
mesoderm | 9.64e-17 | 315 |
mesoderm-derived structure | 9.64e-17 | 315 |
presumptive mesoderm | 9.64e-17 | 315 |
connective tissue | 1.17e-08 | 371 |