FFCP PHASE1:Hg19::chr19:1040096..1040161,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10347 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IZY2,E9PL63,B3KUJ3 | |||
|association_with_transcript=0bp_to_ENST00000263094,ENST00000524850,ENST00000525238,ENST00000526885,ENST00000530703,NM_019112,uc002lqw.3,uc010dsa.2_5end | |||
|description=CAGE_peak_1_at_ABCA7_5end | |||
|id=chr19:1040096..1040161,+ | |||
|ontology_enrichment_celltype=CL:0000037!6.46e-49!172;CL:0000566!6.46e-49!172;CL:0000988!4.72e-47!182;CL:0002032!6.69e-46!165;CL:0000837!6.69e-46!165;CL:0000738!2.27e-41!140;CL:0002031!5.19e-34!124;CL:0002087!9.06e-32!119;CL:0000763!1.31e-26!112;CL:0000049!1.31e-26!112;CL:0000766!5.99e-18!76;CL:0000542!2.28e-17!53;CL:0000051!2.28e-17!53;CL:0000838!4.71e-17!52;CL:0000557!3.12e-16!71;CL:0000839!5.55e-16!70;CL:0002009!7.37e-14!65;CL:0002194!3.71e-13!63;CL:0000576!3.71e-13!63;CL:0000040!3.71e-13!63;CL:0000559!3.71e-13!63;CL:0000860!1.89e-10!45;CL:0002057!2.25e-10!42;CL:0000791!3.07e-10!18;CL:0000789!3.07e-10!18;CL:0002420!3.07e-10!18;CL:0002419!3.07e-10!18;CL:0000790!3.07e-10!18;CL:0000084!5.16e-09!25;CL:0000827!5.16e-09!25;CL:0000945!4.46e-08!24;CL:0000826!4.46e-08!24;CL:0000236!2.09e-07!14;CL:0000625!2.98e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.22e-10;53!CL:0000791;3.20e-10;18!CL:0000789;3.20e-10;18!CL:0002419;3.20e-10;18!CL:0000738;3.12e-09;136!CL:0000084;4.62e-09;25!CL:0002087;5.01e-09;104!CL:0000945;4.24e-08;24!CL:0000988;5.73e-08;177!CL:0000576;7.45e-08;48!CL:0000766;8.20e-08;69!CL:0000236;1.58e-07;13!CL:0000763;1.86e-07;100!CL:0000473;2.01e-07;39!CL:0000234;2.01e-07;39!CL:0000625;2.85e-07;11!CL:0000860;3.54e-07;33!CL:0002057;3.54e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.07e-49,168;CL:0000988,1.66e-47,177;CL:0002032,2.16e-46,161;CL:0000837,2.16e-46,161;CL:0000738,5.98e-42,136;CL:0002031,1.47e-34,120;CL:0002087,2.65e-32,115;CL:0000763,4.54e-27,108;CL:0000049,4.54e-27,108;CL:0000766,1.95e-18,72;CL:0000542,2.23e-17,53;CL:0000051,2.23e-17,53;CL:0000838,4.61e-17,52;CL:0000557,1.07e-16,67;CL:0000839,1.90e-16,66;CL:0002009,2.80e-14,61;CL:0002194,1.45e-13,59;CL:0000576,1.45e-13,59;CL:0000040,1.45e-13,59;CL:0000559,1.45e-13,59;CL:0000473,9.58e-12,48;CL:0000234,9.58e-12,48;CL:0000860,2.22e-10,42;CL:0002057,2.22e-10,42;CL:0000791,3.03e-10,18;CL:0000789,3.03e-10,18;CL:0002420,3.03e-10,18;CL:0002419,3.03e-10,18;CL:0000790,3.03e-10,18;CL:0000084,5.11e-09,25;CL:0000827,5.11e-09,25;CL:0000945,4.41e-08,24;CL:0000826,4.41e-08,24;CL:0000236,2.07e-07,14;CL:0000625,2.95e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;1.22e-10;53!CL:0000790;3.20e-10;18!CL:0000049;7.88e-08;108!CL:0002057;1.15e-07;42 | |||
|ontology_enrichment_disease=DOID:2531!7.57e-07!51;DOID:0060083!7.57e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.86e-07,51;DOID:0060083,7.86e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.16e-21!102;UBERON:0003061!3.16e-21!102;UBERON:0002193!1.37e-19!112;UBERON:0002371!4.83e-14!80;UBERON:0001474!1.41e-12!86;UBERON:0002405!2.43e-10!115;UBERON:0007023!1.20e-08!115;UBERON:0004765!3.34e-08!101;UBERON:0001434!3.34e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.50e-21,98;UBERON:0003061,1.50e-21,98;UBERON:0002193,7.82e-20,108;UBERON:0002405,8.15e-15,93;UBERON:0002371,2.72e-14,76;UBERON:0001474,9.79e-13,82;UBERON:0004765,2.63e-12,90;UBERON:0007023,1.68e-08,114;UBERON:0001434,1.79e-08,100 | |||
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| |||
|short_description=p1@ABCA7 | |||
}} |
Revision as of 20:10, 20 January 2014
Short description: | p1@ABCA7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ABCA7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000263094, ENST00000524850, ENST00000525238, ENST00000526885, ENST00000530703, NM_019112, uc002lqw.3, uc010dsa.2_5end |
EntrezGene: | ABCA7 |
HGNC: | 37 |
UniProt: | Q8IZY2E9PL63B3KUJ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.50e-21 | 98 |
blood island | 1.50e-21 | 98 |
hemolymphoid system | 7.82e-20 | 108 |
immune system | 8.15e-15 | 93 |
bone marrow | 2.72e-14 | 76 |
bone element | 9.79e-13 | 82 |
skeletal element | 2.63e-12 | 90 |
adult organism | 1.68e-08 | 114 |
skeletal system | 1.79e-08 | 100 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.86e-07 | 51 |
immune system cancer | 7.86e-07 | 51 |