FFCP PHASE1:Hg19::chr19:47112998..47113020,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=808 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1449 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AL050207_5end | |||
|description=CAGE_peak_17_at_CALM3_5end | |||
|id=chr19:47112998..47113020,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!2.40e-12!34;UBERON:0001869!2.45e-12!32;UBERON:0002020!2.77e-12!34;UBERON:0003528!2.77e-12!34;UBERON:0002791!8.35e-12!33;UBERON:0000956!2.50e-10!25;UBERON:0000203!2.50e-10!25;UBERON:0002780!5.69e-10!41;UBERON:0001890!5.69e-10!41;UBERON:0006240!5.69e-10!41;UBERON:0002619!5.85e-10!22;UBERON:0001049!1.51e-09!57;UBERON:0005068!1.51e-09!57;UBERON:0006241!1.51e-09!57;UBERON:0007135!1.51e-09!57;UBERON:0001017!2.34e-09!82;UBERON:0003080!2.82e-09!42;UBERON:0005743!5.28e-09!86;UBERON:0001950!5.58e-09!20;UBERON:0002616!1.03e-08!59;UBERON:0000955!1.14e-08!69;UBERON:0006238!1.14e-08!69;UBERON:0003056!4.15e-08!61;UBERON:0003075!1.59e-07!86;UBERON:0007284!1.59e-07!86;UBERON:0000073!5.42e-07!94;UBERON:0001016!5.42e-07!94;UBERON:0002346!5.45e-07!90;UBERON:0000033!7.36e-07!123;UBERON:0000153!8.49e-07!129;UBERON:0007811!8.49e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.08e-18;22!UBERON:0001950;3.71e-18;20!UBERON:0000956;5.60e-16;25!UBERON:0000203;5.60e-16;25!UBERON:0001869;1.21e-13;32!UBERON:0001893;8.58e-13;34!UBERON:0002791;2.53e-12;32!UBERON:0003528;3.10e-11;34!UBERON:0002020;3.10e-11;34!UBERON:0002780;1.96e-08;41!UBERON:0001890;1.96e-08;41!UBERON:0002021;6.02e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,3.17e-19,22;UBERON:0001950,1.04e-18,20;UBERON:0000956,1.93e-16,25;UBERON:0000203,1.93e-16,25;UBERON:0001869,1.30e-15,32;UBERON:0001893,2.08e-14,34;UBERON:0002791,8.77e-14,32;UBERON:0003528,1.04e-12,34;UBERON:0002020,1.04e-12,34;UBERON:0002780,1.13e-12,41;UBERON:0001890,1.13e-12,41;UBERON:0003080,1.13e-12,41;UBERON:0006240,1.13e-12,41;UBERON:0001017,1.30e-11,81;UBERON:0000955,5.48e-10,68;UBERON:0006238,5.48e-10,68;UBERON:0001049,7.32e-10,56;UBERON:0005068,7.32e-10,56;UBERON:0006241,7.32e-10,56;UBERON:0007135,7.32e-10,56;UBERON:0001016,1.06e-09,89;UBERON:0000073,1.20e-09,53;UBERON:0002616,1.20e-09,53;UBERON:0003056,7.02e-09,61;UBERON:0003075,4.99e-08,82;UBERON:0007284,4.99e-08,82;UBERON:0002346,2.29e-07,86;UBERON:0002021,4.24e-07,5 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.422863212287913,1.0007329835313,0.893922188854576,0.872338524100369,0,0,0.261185628199839,0.491467873003018,2.09340350391728,0,0,0.866364470720326,0.662794751455832,0,3.01347264011988,1.46062018077475,1.46379839637152,0.369363174230364,0.816002764977012,0.940364164434263,0.85870796139317,0.410623275218653,0.753255837568817,0.840547463227464,0.410502947249729,0.550975469195755,0,0.383829398097213,0,0.919421224478927,0,0.369754010166788,0.154934401160603,0,0.293600439334847,0,0.401088894940283,0.217010870715852,0.447830948479849,0,0,0.290796477559129,0,0,0.232429036905685,0.411167888021826,0,0,0.256160706529101,0.709446689665756,0.344745680736619,0,0,0.564727018627814,0,0.674170453335254,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0.434377689410233,0,0,0,0.211255286311942,0.212604299965044,0.209658645508376,0.22465726229299,0.300353785683013,0,0,0.39783335439818,0.547992461293902,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0,0.393010762749165,0.616804496998528,0.334372990781356,0.32592226663359,0,0,0.668462741311041,0,0.664601683750863,0.541607727530031,0.640456598628376,0.520237390239513,1.47994114143309,0.276350017785848,0.289803085735052,0.593146252648242,0.267540828089713,0,0.453237370790265,0.383220493601921,0,0.506039384039006,0,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0.710331756132051,1.64225599384209,0.403213486449465,0.534880391567015,0.144824403882799,0,0,0.511450247374121,0,0,1.01392563272577,0.795285947051099,0.486634870302636,0.472674085820339,0.443458794925128,0.351339142772504,0.327447688744282,0.364295288292542,0.741568885568859,0,0.348259474598534,0.132957960518865,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,1.37559020970034,1.04497483268405,1.03366703667732,0.35576626268671,0.33472061276467,0,0,0.732186172644509,0.735326160691737,0.81014194788176,0.803697554556718,0,0.337834441449967,1.53316637465883,0,0.549605231791222,0,0,0.436094052142534,0.496971951695318,0.506522046658319,0,0.286836620748814,1.41867352879343,0.560677600142307,1.06748995729705,1.48000529050296,0,0.538842688278752,0.490385709340376,0.302714855289863,0,0.234321431833797,0.312160076830321,0,0.747243402759005,0.587172493218824,0.809364721840658,0.842704840213491,0.408308342509787,1.35117749042945,0.206651562351531,0,0.741800787835671,0,0,0.336672227908132,0.750711119231785,0.277064115484183,0.438977620880838,1.5324389789951,0.300476117813194,0.567160915800105,0,0,0.423863802319124,0.300091096084402,0.618315175430633,0.257640540045629,0.37223371266318,0.675105328965065,1.26668106709558,0.252433774244115,0.276149695926898,0.646584227275248,0.355009592516614,1.5112814734146,1.18692414617341,0,0.545492241181669,0,0.731842236777572,0,0.69716365721711,0.414644220061482,0.756962552626885,0.36497735907583,0,1.28648187638577,0,0.928735856063958,0.721879481669586,0.236613600079688,0.337169380156203,0.482022059766964,0,0.217879444092406,0,0.269662616320329,0.196221465125346,0.769494313892781,0.738155454624648,1.40241773803446,0,2.94017422771084,0,0,0,0.882926198829301,0.245976877086227,0.343135620597051,0.219500570817251,0,0.502644862058154,0.555530670951178,0.977424915930974,4.15973914111831,0,0.115930404975077,0,0.577465791044295,0,0.190254152234598,3.1608175918371,0,0.492434012174795,0.702012795417713,0.445893486866185,0,0.16798212819886,0.141775097242386,0.0895585227028483,0.290633938513962,0,3.94130590316755,0.968532774145487,0.621984346622316,0.576479813667846,0.50496973370552,0.380987365753014,1.14596527667483,1.17217447210047,0,0.719792448923265,0.300343057843917,0.285826432630578,0.112131084345361,0.43596006883328,0.36669142910475,0.129271715757778,0,0,0.531876233169741,1.04007436911366,0.514414748524284,0,1.0656887160644,0.285955987316295,0,0.823240336780769,0.325736184293735,0.355391948742546,1.58390374586686,0,0.871533458600294,0.599837947092342,1.2162378064119,0,0,0.479249710983165,0,0,0.868687840005475,0.61642896765115,0.716243852959582,0.336255431980582,0,0.646882724578552,0.256686072559497,0.254094624222463,0,1.54657762555539,1.00509759200609,0.637938751653163,1.49801404789436,2.99161459204025,0.414415513436035,0.24538298343828,1.50051156317903,0.813795071099207,0.623912584592421,1.07057393278297,0.157702415033935,0.35142424497814,0.902838299183157,2.27407504055985,0,0,0.184369168541703,0.695068915744663,0.391602314925481,1.02943027143257,0,0.431428401637234,0.213455115606889,0.909382714338778,0,0.907170879989041,0.744323423456331,0.153461973288062,0.841980283299221,0.640695746278505,0.511707249066704,0.321707842287215,1.48418066444991,0.925258162815933,0.887808626565635,0.492762936082855,1.03850885836724,0.697262270759755,1.20859449591622,0.601519410909855,0.644566922551274,0.229628896329213,0.728364672026868,1.83574180943194,0,0.770153371044148,0,1.46139224653261,0.105551628892876,2.27466768141793,1.19065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| |||
|short_description=p17@CALM3 | |||
}} |
Revision as of 00:04, 21 January 2014
Short description: | p17@CALM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_CALM3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AL050207_5end |
EntrezGene: | CALM3 |
HGNC: | 1449 |
UniProt: | NA |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 3.17e-19 | 22 |
neocortex | 1.04e-18 | 20 |
cerebral cortex | 1.93e-16 | 25 |
pallium | 1.93e-16 | 25 |
cerebral hemisphere | 1.30e-15 | 32 |
telencephalon | 2.08e-14 | 34 |
regional part of telencephalon | 8.77e-14 | 32 |
brain grey matter | 1.04e-12 | 34 |
gray matter | 1.04e-12 | 34 |
regional part of forebrain | 1.13e-12 | 41 |
forebrain | 1.13e-12 | 41 |
anterior neural tube | 1.13e-12 | 41 |
future forebrain | 1.13e-12 | 41 |
central nervous system | 1.30e-11 | 81 |
brain | 5.48e-10 | 68 |
future brain | 5.48e-10 | 68 |
neural tube | 7.32e-10 | 56 |
neural rod | 7.32e-10 | 56 |
future spinal cord | 7.32e-10 | 56 |
neural keel | 7.32e-10 | 56 |
nervous system | 1.06e-09 | 89 |
regional part of nervous system | 1.20e-09 | 53 |
regional part of brain | 1.20e-09 | 53 |
pre-chordal neural plate | 7.02e-09 | 61 |
neural plate | 4.99e-08 | 82 |
presumptive neural plate | 4.99e-08 | 82 |
neurectoderm | 2.29e-07 | 86 |
occipital lobe | 4.24e-07 | 5 |