FFCP PHASE1:Hg19::chr19:58858938..58859039,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AK056201_5end | |||
|description=CAGE_peak_1_at_A1BG_5end | |||
|id=chr19:58858938..58859039,- | |||
|ontology_enrichment_celltype=CL:0000048!4.65e-23!430;CL:0000034!9.28e-23!444;CL:0000723!7.54e-22!436;CL:0000219!5.29e-18!390;CL:0002320!7.06e-18!365;CL:0000055!1.77e-15!180;CL:0000134!1.86e-15!358;CL:0002371!3.98e-14!591;CL:0000144!5.58e-13!625;CL:0000057!1.04e-09!75;CL:0000192!4.21e-09!42;CL:0000514!4.21e-09!42;CL:0000183!1.15e-08!59;CL:0000680!1.71e-08!57;CL:0000056!1.71e-08!57;CL:0000355!1.71e-08!57;CL:0000738!3.17e-08!140;CL:0002031!4.60e-08!124;CL:0000187!8.36e-08!54;CL:0002087!1.45e-07!119;CL:0000359!3.04e-07!32;CL:0000003!5.07e-07!722;CL:0000557!5.37e-07!71;CL:0000393!6.83e-07!60;CL:0000211!6.83e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.85e-07;32!CL:0000192;8.33e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,3.48e-25,427;CL:0000034,7.36e-25,441;CL:0000723,6.55e-24,433;CL:0000219,1.56e-19,386;CL:0002320,1.95e-19,361;CL:0000134,6.66e-17,354;CL:0000057,1.43e-09,76;CL:0000738,1.47e-09,136;CL:0000192,1.63e-09,43;CL:0000514,1.63e-09,43;CL:0002031,1.80e-09,120;CL:0002087,5.30e-09,115;CL:0000680,7.27e-09,58;CL:0000056,7.27e-09,58;CL:0000355,7.27e-09,58;CL:0000557,8.00e-09,67;CL:0000187,3.62e-08,55;CL:0002009,7.09e-08,61;CL:0000988,1.46e-07,177;CL:0000359,3.01e-07,32;CL:0000393,3.16e-07,61;CL:0000211,3.16e-07,61;CL:0002194,3.37e-07,59;CL:0000576,3.37e-07,59;CL:0000040,3.37e-07,59;CL:0000559,3.37e-07,59;CL:0000839,9.38e-07,66 | |||
|ontology_enrichment_development_v019=CL:0000514;8.33e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.72e-18!375;UBERON:0002204!3.66e-13!167;UBERON:0000914!1.43e-10!83;UBERON:0002329!1.43e-10!83;UBERON:0003077!1.43e-10!83;UBERON:0003059!1.43e-10!83;UBERON:0007282!1.43e-10!83;UBERON:0009618!1.43e-10!83;UBERON:0007285!1.43e-10!83;UBERON:0004290!3.12e-09!70;UBERON:0001134!2.54e-07!61;UBERON:0002036!2.54e-07!61;UBERON:0003082!2.54e-07!61;UBERON:0004765!3.93e-07!101;UBERON:0001434!3.93e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.09e-20,371;UBERON:0002204,3.19e-16,167;UBERON:0007524,8.29e-10,73;UBERON:0002329,1.35e-09,71;UBERON:0003059,1.35e-09,71;UBERON:0007282,1.35e-09,71;UBERON:0004290,1.35e-09,71;UBERON:0009618,1.35e-09,71;UBERON:0001434,1.51e-09,100;UBERON:0003077,2.30e-09,72;UBERON:0007285,2.30e-09,72;UBERON:0000926,7.47e-09,315;UBERON:0004120,7.47e-09,315;UBERON:0006603,7.47e-09,315;UBERON:0004765,1.14e-08,90;UBERON:0007503,4.09e-08,78;UBERON:0002371,4.40e-08,76;UBERON:0001134,1.15e-07,62;UBERON:0002036,1.15e-07,62;UBERON:0003082,1.15e-07,62;UBERON:0001474,1.83e-07,82;UBERON:0002385,8.82e-07,64;UBERON:0001015,8.82e-07,64;UBERON:0000383,8.82e-07,64 | |||
|phase1_expression=37.7891028882758,20.1254492457524,19.733616573436,26.0190575718139,30.3933544210556,40.127572108617,43.0609792886128,32.2177135447684,33.954131665979,1.96587149201207,3.48900583986214,0,0.263766978228454,24.5057378860892,34.1339296999753,7.39557661096953,5.42425075221579,8.03341099426111,7.3189919818576,12.4352268657556,13.668046313365,21.31492106051,6.86966369114536,4.65373045247806,8.28581421325698,3.51501666440576,2.79142004129816,1.73163718890094,22.4217637803875,7.67658796194425,17.1845896880844,9.19421224478927,4.51808878167375,9.98335827450327,0.232401601740905,0,39.9296597495392,15.5118714388926,12.8348446380891,15.6247826915413,21.2719700527928,20.0814072931767,18.0302897343931,15.703009788193,11.7141542543531,13.3421233653299,14.8754583619638,10.2791972005456,16.7241440283356,16.1107739700404,13.5765174460423,22.9387762991928,18.2715210790408,9.03678557017357,25.7310324529249,16.9418105588344,9.27880910196676,20.4498370845027,12.8555234795779,11.8743740018155,15.344091019177,16.4925650093358,14.3613833487575,17.0489900213078,15.381089647315,6.80862269629368,13.7020894779026,19.3461472247692,23.9882142473293,24.3251506069731,13.9241885605675,9.57521853567668,16.456044146926,12.6753171787165,13.6066751977628,17.1920089316868,26.9588714751588,27.3321944971541,11.5722422421898,10.2604587746849,7.55883373356542,9.86386430329023,31.6793240030381,19.1148513941746,25.7957683620431,22.1899715734584,15.2150475073685,24.1396024780883,26.4417949113945,31.483773899667,9.10740750575117,9.98303221930596,10.7036503875064,37.0079720021272,24.6623767711876,17.6467336799302,8.26181034478099,9.82526906872912,16.4481199199607,6.8546463110178,14.6665019985116,13.2565385605725,5.84480185223734,10.0269411196656,27.6929553026347,20.8241860908604,10.0197429593056,7.30120522436348,4.29195846947598,11.8395291314647,17.6864011382943,13.3309419438124,15.8666622583405,14.7147455449342,10.4535523804977,9.63129412929313,22.6100091225134,20.9612741744404,3.54227568827304,21.6624481740386,33.2052561466773,35.1667256445898,16.8644133367106,12.542687893133,34.9806034346568,19.8892891716974,26.2760959014735,13.7092585392818,8.29064606928873,18.2478748892327,2.43806866313962,6.70700859703636,10.8683177567001,4.3372698286148,14.0374614978049,5.64901423947212,7.95285947051099,23.8451086448292,2.3633704291017,3.54767035940102,7.02678285545008,4.84622579341537,12.750335090239,6.67411997011973,14.2800853208061,17.9353629418245,17.8163667095279,66.5388841811904,80.651282419998,95.4645778416982,4.37277296206751,28.3877416385021,5.9013885273291,13.0020826642522,18.8774746294458,6.32771496462155,5.64286409649389,1.8089173141853,1.06729878806013,1.67360306382335,16.9188313185842,9.12326526862215,19.5249646038536,4.04429388380456,23.494116488571,0.803697554556718,1.12264686313085,1.35133776579987,6.13266549863533,3.79706263827252,10.9921046358244,1.31780417436063,0,7.84969293856562,30.8122610051097,8.23098325819768,10.1955069226178,3.15520282823695,6.02936249737207,12.8955848032731,17.0798393167528,49.333509683432,11.2035972743916,17.7818087131988,8.66348086501331,24.6712607061238,28.8087962239999,17.8084288193685,23.7241658391044,24.5302883264113,27.797454582635,12.5654913548828,10.1979954951923,8.70795001553941,21.4361879817638,20.1448280391299,22.9383234210199,17.8200428592308,27.9411630084769,10.0117749813183,48.8660336435042,19.8636614465798,12.7620890269403,15.2385263516301,10.5354629011401,25.1319992555196,13.5214253015937,12.7044045139224,6.27863724911017,33.101395266878,22.0409177205944,9.90300617078528,18.8586128506343,10.3056216018252,30.5231644383807,7.42615861861571,20.0720230632069,5.04867548488229,28.6275184777551,25.0551388069158,12.4253357380815,18.9413944667964,22.5515587772949,5.7978255948989,6.00041465299836,1.43402297694502,7.9282908984237,5.16866096453793,10.5736488011262,10.0551223364909,7.56962552626885,14.5990943630332,25.0319251727706,32.1620469096443,23.4829366299217,34.8275946023984,44.7565278635143,0,0,0,0,0,0,0.134831308160164,0,0,0,19.6338483324824,19.3439785325758,23.5213938216867,1.26755034821831,1.96565443335525,1.77236972004421,8.38779888887836,0.491953754172454,5.49016992955282,7.24351883696929,2.24803506515239,2.21163739305588,1.574003567695,21.8291564557918,32.2379783436669,14.4331342025273,5.56465943880369,11.7408694235822,8.08452107462013,6.01881166349594,3.61482889245737,6.3216351836742,2.57545848628462,16.0041053956808,13.3382431129365,17.0925836632037,5.62403003920662,10.750856204727,8.22295564005842,3.94057499892532,4.94077695473735,3.06706143332169,9.85326475791887,14.0877494421162,11.6103744702832,23.0591925467138,21.2087288156318,20.5733177506628,22.5373171079384,23.4434894420094,25.6608669034058,15.0128139346852,17.7202404127911,11.7188837378537,5.7186853016134,3.48768055066624,4.76698857836175,23.0103654048844,307.584543432619,5.917119267892,9.83971031364021,20.8014873822732,6.68739173081569,8.5109479213967,6.66055447540248,21.8756330296966,91.7030513111539,27.9901714505461,9.772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| |||
|short_description=p1@A1BG | |||
}} |
Revision as of 01:24, 21 January 2014
Short description: | p1@A1BG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_A1BG_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AK056201_5end |
EntrezGene: | A1BG |
HGNC: | 5 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 3.48e-25 | 427 |
stem cell | 7.36e-25 | 441 |
somatic stem cell | 6.55e-24 | 433 |
motile cell | 1.56e-19 | 386 |
connective tissue cell | 1.95e-19 | 361 |
mesenchymal cell | 6.66e-17 | 354 |
fibroblast | 1.43e-09 | 76 |
leukocyte | 1.47e-09 | 136 |
smooth muscle cell | 1.63e-09 | 43 |
smooth muscle myoblast | 1.63e-09 | 43 |
hematopoietic lineage restricted progenitor cell | 1.80e-09 | 120 |
nongranular leukocyte | 5.30e-09 | 115 |
muscle precursor cell | 7.27e-09 | 58 |
myoblast | 7.27e-09 | 58 |
multi-potent skeletal muscle stem cell | 7.27e-09 | 58 |
granulocyte monocyte progenitor cell | 8.00e-09 | 67 |
muscle cell | 3.62e-08 | 55 |
macrophage dendritic cell progenitor | 7.09e-08 | 61 |
hematopoietic cell | 1.46e-07 | 177 |
vascular associated smooth muscle cell | 3.01e-07 | 32 |
electrically responsive cell | 3.16e-07 | 61 |
electrically active cell | 3.16e-07 | 61 |
monopoietic cell | 3.37e-07 | 59 |
monocyte | 3.37e-07 | 59 |
monoblast | 3.37e-07 | 59 |
promonocyte | 3.37e-07 | 59 |
myeloid lineage restricted progenitor cell | 9.38e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.09e-20 | 371 |
musculoskeletal system | 3.19e-16 | 167 |
dense mesenchyme tissue | 8.29e-10 | 73 |
somite | 1.35e-09 | 71 |
presomitic mesoderm | 1.35e-09 | 71 |
presumptive segmental plate | 1.35e-09 | 71 |
dermomyotome | 1.35e-09 | 71 |
trunk paraxial mesoderm | 1.35e-09 | 71 |
skeletal system | 1.51e-09 | 100 |
paraxial mesoderm | 2.30e-09 | 72 |
presumptive paraxial mesoderm | 2.30e-09 | 72 |
mesoderm | 7.47e-09 | 315 |
mesoderm-derived structure | 7.47e-09 | 315 |
presumptive mesoderm | 7.47e-09 | 315 |
skeletal element | 1.14e-08 | 90 |
epithelial vesicle | 4.09e-08 | 78 |
bone marrow | 4.40e-08 | 76 |
skeletal muscle tissue | 1.15e-07 | 62 |
striated muscle tissue | 1.15e-07 | 62 |
myotome | 1.15e-07 | 62 |
bone element | 1.83e-07 | 82 |
muscle tissue | 8.82e-07 | 64 |
musculature | 8.82e-07 | 64 |
musculature of body | 8.82e-07 | 64 |