FFCP PHASE1:Hg19::chr2:138721850..138721890,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3176 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5028 | |||
|TSSclassifier=strong | |||
|UniProt=P50135 | |||
|association_with_transcript=0bp_to_ENST00000280097,ENST00000329366_5end | |||
|description=CAGE_peak_4_at_HNMT_5end | |||
|id=chr2:138721850..138721890,+ | |||
|ontology_enrichment_celltype=CL:0002194!1.26e-35!63;CL:0000576!1.26e-35!63;CL:0000040!1.26e-35!63;CL:0000559!1.26e-35!63;CL:0002009!6.48e-35!65;CL:0000557!1.23e-29!71;CL:0000839!2.44e-29!70;CL:0000860!4.69e-29!45;CL:0002057!2.16e-28!42;CL:0000766!3.40e-28!76;CL:0000763!2.06e-16!112;CL:0000049!2.06e-16!112;CL:0000048!6.80e-11!430;CL:0002087!2.60e-10!119;CL:0000723!4.68e-10!436;CL:0000034!1.15e-09!444;CL:0002320!7.85e-09!365;CL:0000134!8.72e-09!358;CL:0000738!4.14e-08!140;CL:0002031!4.46e-08!124;CL:0000136!4.61e-08!15;CL:0002393!4.97e-07!9;CL:0002397!4.97e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.27e-32;39!CL:0000234;4.27e-32;39!CL:0000860;5.23e-29;33!CL:0002057;5.23e-29;33!CL:0000576;6.44e-27;48!CL:0000766;1.03e-18;69!CL:0000136;4.77e-16;13!CL:0000235;1.47e-11;6!CL:0000763;1.08e-09;100!CL:0002393;3.73e-07;6!CL:0002397;3.73e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.34e-49,48;CL:0000234,2.34e-49,48;CL:0002194,6.35e-43,59;CL:0000576,6.35e-43,59;CL:0000040,6.35e-43,59;CL:0000559,6.35e-43,59;CL:0002009,4.21e-41,61;CL:0000860,1.25e-39,42;CL:0002057,1.25e-39,42;CL:0000839,4.97e-37,66;CL:0000557,2.74e-36,67;CL:0000766,1.01e-34,72;CL:0000763,1.12e-22,108;CL:0000049,1.12e-22,108;CL:0002087,5.91e-17,115;CL:0002031,6.94e-15,120;CL:0000136,1.12e-13,15;CL:0000738,2.30e-13,136;CL:0000235,1.62e-11,6;CL:0002032,4.55e-11,161;CL:0000837,4.55e-11,161;CL:0000037,9.83e-11,168;CL:0000134,1.04e-09,354;CL:0002320,1.12e-09,361;CL:0000988,1.36e-09,177;CL:0000048,2.19e-09,427;CL:0000723,5.62e-09,433;CL:0000034,6.14e-09,441;CL:0002393,7.97e-09,9;CL:0002397,7.97e-09,9;CL:0000219,2.67e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.55e-27;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.72e-24!80;UBERON:0002405!4.46e-23!115;UBERON:0001474!8.38e-21!86;UBERON:0002390!1.24e-20!102;UBERON:0003061!1.24e-20!102;UBERON:0002193!5.17e-19!112;UBERON:0002204!1.07e-18!167;UBERON:0004765!3.38e-18!101;UBERON:0001434!3.38e-18!101;UBERON:0000926!1.59e-14!448;UBERON:0004120!1.59e-14!448;UBERON:0006603!1.59e-14!448;UBERON:0003081!6.34e-10!216;UBERON:0002384!6.87e-09!375;UBERON:0000468!1.76e-08!659;UBERON:0000062!1.89e-08!511;UBERON:0000923!1.59e-07!604;UBERON:0005291!1.59e-07!604;UBERON:0006598!1.59e-07!604;UBERON:0002532!1.59e-07!604;UBERON:0000467!1.85e-07!625;UBERON:0002050!2.06e-07!605;UBERON:0005423!2.06e-07!605;UBERON:0000480!2.40e-07!626;UBERON:0000922!3.39e-07!612 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.68e-30,76;UBERON:0001474,2.36e-27,82;UBERON:0004765,3.33e-25,90;UBERON:0002405,4.18e-24,93;UBERON:0002390,2.08e-23,98;UBERON:0003061,2.08e-23,98;UBERON:0001434,1.18e-22,100;UBERON:0002193,4.57e-20,108;UBERON:0002204,4.16e-17,167;UBERON:0000926,9.83e-11,315;UBERON:0004120,9.83e-11,315;UBERON:0006603,9.83e-11,315;UBERON:0002384,1.66e-09,371;UBERON:0003081,3.70e-09,203 | |||
|phase1_expression=2.36181893051724,1.92690471501885,1.83240725324762,3.00219895059391,1.34088328328186,0,5.06599756336621,0,1.30592814099919,0,0,0,0,0.123766352960047,0,1.34465029290355,0.602694528023977,0.730310090387373,0.975865597581014,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,1.54816123316076,0,0,0,0,0,0,1.10799081706375,2.60707781711184,1.73608696572681,1.11957737119962,0.647787332037959,1.03030227053675,4.07115068582781,0.377875943688809,1.21292030593908,5.57829688573643,1.23350366406548,4.02618282163635,1.43846196161075,0.512321413058201,0.47296445977717,4.82643953031266,1.29096936716765,1.35426486594342,3.20011977222428,1.36453075028923,2.24723484445085,4.28517449319264,2.56743221660875,2.55734850319616,0.989553900560148,0.797854630486527,0.426224750532694,11.8985787837719,7.37600792098482,5.60540024096017,1.7587406567972,0.521482918420201,1.52032191293582,10.2917915447673,6.99727508376373,7.91155968602211,1.26753171787165,0.637812899895131,2.30624510059213,1.46027220490444,1.95229960693958,3.53596290733576,0.855038231223746,1.59133341759272,4.01861138282195,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,1.68152568894461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,2.01210257911091,0.383587685530591,0.361439152384566,0,0.869079113764942,0,0.973269740605272,0.189069634328136,0,0.087834785693126,0.196468613246569,0,0,0.324547393654683,0.696518949197069,0.664789802594326,0.238490624305342,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0.17859945656816,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0.496971951695318,0,0.662045904066094,0,0,0,1.06748995729705,0,0.933633106199299,0.269421344139376,0.490385709340376,0,0,0.468642863667593,0.312160076830321,0,0.747243402759005,0,0,0.140450806702248,0.204154171254893,0,0.103325781175765,1.18800285728205,1.23633464639278,0,0,0,0.125118519871964,0.277064115484183,0,0,1.35214253015937,0,0,0.640672166455702,0.635795703478686,0,0.309157587715317,0.257640540045629,1.48893485065272,0,0,0,0.736399189138395,0,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,6.25798129319264,0.643240938192885,0,6.03678306441573,5.77503585335668,0.354920400119532,0,0,0.330881918197182,0.653638332277218,0.71181185733329,0.404493924480493,0.98110732562673,0,0,0,0,0,1.26755034821831,3.9313088667105,2.95394953340702,0,0.245976877086227,0.514703430895577,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0.570762456703795,0,0,2.46217006087397,2.57404691653161,3.12125440806329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0.387815147273333,0,0.845302752556,0.26593811658487,0,0,0,0,0.857867961948885,0,0.823240336780769,0,1.42156779497018,0.791951872933429,1.50719688529793,0,0.199945982364114,3.64871341923571,3.51579964002488,2.10833939483032,0,0,0,0.579125226670317,1.64381058040307,1.07436577943937,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0.613457458595699,1.50051156317903,0,0.207970861530807,0,0.473107245101804,0.234282829985426,0,0,0,0,0,0.521301686808497,0,0,0.413536052245775,0.647142602455851,1.06727557803444,0,0,0,0.992431231275107,0.767309866440312,1.12264037773229,0.768834895534206,0,0.64341568457443,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0.0920809889358963,1.14814448164607,0.364182336013434,1.31124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54561517471583,0,0,0,0,1.6068392984416,0,0.462145851343933,0.307007349452259,0,1.71872391789238,0.435050081742686,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.286249773483982,0,0,1.33441135746677,0,0.42793898803392,0.318203247925937,0,1.2591072030832,1.09814811894422,1.53156123049392,0,0,0,0,0.731140468893853,0,0.545999645631943,0.848432591722276,0,0,0.66343897524122,0,0,0,0.608731130888112,0,0,0.143411352204052,0.392996164052485,0,0.709522128141196,0.844430541190656,0.658589785919804,0,0,0,0,0,1.60044461320525,0,0,0,0,0.507447609232169,0,0,0.714695326373367,0.822724546172388,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,1.70338495076131,4.46556948182494,0.614481528616916,1.11838053946208,0.500547425135725,1.56310476321632,0,0,0,0,0,0.37428108081644,9.96255619048879,0,0,0,0,0,0,0,0.422008249231538,3.7844959707788,0,0,0,0,0,0.102268682502155,0,0,0,0,0.511572370226872,1.08507746200627,0,0,0,0,0,0,0,7.24999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538651809526579,3.07643550786903,0,0.0897576444097721,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0,0.995261931078505,1.14994833854341,1.83309043480088,0,0,0,0,0,0,0,0,0,0.394584402849391,2.41981432097328,0,0.695052375913368,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.52418000472609,0,0.19351266257817,0.511625219603299,0.739039113478883,0.290967049465258,0,0.677942222341597,0,0,0.189932387867636,0,0.0801588202515337,0.213452994739353,0,0.144090417154106,0,0,0,0,0,2.8539883275459,2.510468311496,0,0,0,0,0,0.429765441419957,0,0,0.229160424011684,2.87149209830726,0,0.429226048136571,0.446342914883745,0,0,1.16495949527454,0,0.247247575143499,0.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| |||
|short_description=p4@HNMT | |||
}} |
Revision as of 05:37, 21 January 2014
Short description: | p4@HNMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HNMT_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000280097, ENST00000329366_5end |
EntrezGene: | HNMT |
HGNC: | 5028 |
UniProt: | P50135 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.68e-30 | 76 |
bone element | 2.36e-27 | 82 |
skeletal element | 3.33e-25 | 90 |
immune system | 4.18e-24 | 93 |
hematopoietic system | 2.08e-23 | 98 |
blood island | 2.08e-23 | 98 |
skeletal system | 1.18e-22 | 100 |
hemolymphoid system | 4.57e-20 | 108 |
musculoskeletal system | 4.16e-17 | 167 |
mesoderm | 9.83e-11 | 315 |
mesoderm-derived structure | 9.83e-11 | 315 |
presumptive mesoderm | 9.83e-11 | 315 |
connective tissue | 1.66e-09 | 371 |
lateral plate mesoderm | 3.70e-09 | 203 |