FFCP PHASE1:Hg19::chr2:149793822..149793833,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3800 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6325 | |||
|TSSclassifier=strong | |||
|UniProt=A1L179 | |||
|association_with_transcript=25bp_to_BC127772_5end | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_12_at_KIF5C_5end | |||
|id=chr2:149793822..149793833,+ | |||
|ontology_enrichment_celltype=CL:0002322!5.02e-13!5;CL:0002605!1.75e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000540;8.72e-07;6!CL:0000404;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,9.49e-07,6;CL:0000031,9.49e-07,6;CL:0000404,9.49e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.74e-12;3!UBERON:0006215;2.74e-12;3!UBERON:0003057;2.74e-12;3!CL:0000031;8.72e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.92e-62!57;UBERON:0005068!1.92e-62!57;UBERON:0006241!1.92e-62!57;UBERON:0007135!1.92e-62!57;UBERON:0000073!1.18e-52!94;UBERON:0001016!1.18e-52!94;UBERON:0001017!8.22e-52!82;UBERON:0005743!1.59e-51!86;UBERON:0002020!7.85e-51!34;UBERON:0003528!7.85e-51!34;UBERON:0002616!8.30e-50!59;UBERON:0003075!3.58e-47!86;UBERON:0007284!3.58e-47!86;UBERON:0001893!7.77e-47!34;UBERON:0001869!4.08e-46!32;UBERON:0002791!9.19e-45!33;UBERON:0002346!1.42e-44!90;UBERON:0002780!5.36e-44!41;UBERON:0001890!5.36e-44!41;UBERON:0006240!5.36e-44!41;UBERON:0000955!7.08e-43!69;UBERON:0006238!7.08e-43!69;UBERON:0003080!8.78e-43!42;UBERON:0000956!2.59e-38!25;UBERON:0000203!2.59e-38!25;UBERON:0002619!9.63e-32!22;UBERON:0001950!7.31e-31!20;UBERON:0003056!1.79e-29!61;UBERON:0004121!2.62e-28!169;UBERON:0000924!2.31e-27!173;UBERON:0006601!2.31e-27!173;UBERON:0007023!1.40e-25!115;UBERON:0000033!7.30e-23!123;UBERON:0000153!2.47e-21!129;UBERON:0007811!2.47e-21!129;UBERON:0003076!3.08e-20!15;UBERON:0003057!3.08e-20!15;UBERON:0000025!9.53e-18!194;UBERON:0002308!1.02e-13!9;UBERON:0000125!1.02e-13!9;UBERON:0004733!2.89e-13!12;UBERON:0002028!2.89e-13!12;UBERON:0007277!2.89e-13!12;UBERON:0000064!1.51e-12!219;UBERON:0001871!3.18e-12!7;UBERON:0000483!3.69e-12!309;UBERON:0004732!3.94e-12!13;UBERON:0004111!4.77e-12!241;UBERON:0000119!6.43e-12!312;UBERON:0000200!1.39e-11!6;UBERON:0002298!3.09e-11!8;UBERON:0002680!1.06e-10!9;UBERON:0001895!1.06e-10!9;UBERON:0010092!1.06e-10!9;UBERON:0000477!2.10e-10!286;UBERON:0002420!2.39e-10!9;UBERON:0007245!2.39e-10!9;UBERON:0010009!2.39e-10!9;UBERON:0010011!2.39e-10!9;UBERON:0000454!2.39e-10!9;UBERON:0002021!5.78e-10!5;UBERON:0002240!1.24e-09!3;UBERON:0001872!1.34e-09!5;UBERON:0009663!1.86e-09!7;UBERON:0002771!1.89e-09!3;UBERON:0006331!1.18e-08!3;UBERON:0000988!1.34e-08!3;UBERON:0000922!2.01e-07!612;UBERON:0000369!9.65e-07!4;UBERON:0002435!9.65e-07!4;UBERON:0000204!9.65e-07!4;UBERON:0010082!9.65e-07!4;UBERON:0000475!9.96e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002771;5.48e-18;2!UBERON:0002240;2.74e-12;3!UBERON:0005174;2.74e-12;3!UBERON:0002114;2.74e-12;2!UBERON:0001137;2.74e-12;3!UBERON:0002021;5.73e-08;5!UBERON:0002108;6.78e-08;4!UBERON:0001950;2.44e-07;20!UBERON:0000200;7.17e-07;6!UBERON:0002037;8.72e-07;6!UBERON:0002619;8.87e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,5.48e-18,2;UBERON:0002240,2.59e-12,3;UBERON:0005174,2.59e-12,3;UBERON:0001137,2.59e-12,3;UBERON:0002114,2.89e-12,2;UBERON:0001017,2.04e-10,81;UBERON:0001049,7.01e-10,56;UBERON:0005068,7.01e-10,56;UBERON:0006241,7.01e-10,56;UBERON:0007135,7.01e-10,56;UBERON:0003076,8.10e-10,15;UBERON:0003057,8.10e-10,15;UBERON:0001016,1.94e-09,89;UBERON:0002021,5.73e-08,5;UBERON:0002108,7.01e-08,4;UBERON:0001950,2.44e-07,20;UBERON:0003075,6.13e-07,82;UBERON:0007284,6.13e-07,82;UBERON:0000200,7.17e-07,6;UBERON:0002037,8.02e-07,6;UBERON:0006215,8.02e-07,6;UBERON:0002619,8.87e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0.207322110030741,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0.111308705022906,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,1.52581736317083,0.331737779793674,0.591095237907095,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953423842781029,0,0.137539436597234,1.24632101408756,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6369980662746,0.500763722825999,0,0.110929051536852,0.18628920882415,0,0,0,0.285465333544967,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0.327628914576042,0,0,0,0,0,0,0.80057074828547,0,0,0.385375350578757,0,0.957803154342908,2.87162909937057,0.756215088665154,0.484100767249525,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.826747186004736,0.443910671357348,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.271878931907327,0.328863867814245,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0.219881033490858,0.603851374266694,0,0,0,0,0,1.37415926980462,0.594092800654172,0.4226557275834,0,0,0,0,0,0,0,0,0,0.286679166302903,0.157771562193185,0.203974470572744,1.30905207102113,0,0,0,0,0,0,0,0,0.534434810531121,0,0,0,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p12@KIF5C | |||
}} |
Revision as of 05:53, 21 January 2014
Short description: | p12@KIF5C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_KIF5C_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 25bp_to_BC127772_5end |
EntrezGene: | KIF5C |
HGNC: | 6325 |
UniProt: | A1L179 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 9.49e-07 | 6 |
neuroblast | 9.49e-07 | 6 |
electrically signaling cell | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 5.48e-18 | 2 |
spinal cord | 2.59e-12 | 3 |
dorsal region element | 2.59e-12 | 3 |
dorsum | 2.59e-12 | 3 |
duodenum | 2.89e-12 | 2 |
central nervous system | 2.04e-10 | 81 |
neural tube | 7.01e-10 | 56 |
neural rod | 7.01e-10 | 56 |
future spinal cord | 7.01e-10 | 56 |
neural keel | 7.01e-10 | 56 |
posterior neural tube | 8.10e-10 | 15 |
chordal neural plate | 8.10e-10 | 15 |
nervous system | 1.94e-09 | 89 |
occipital lobe | 5.73e-08 | 5 |
small intestine | 7.01e-08 | 4 |
neocortex | 2.44e-07 | 20 |
neural plate | 6.13e-07 | 82 |
presumptive neural plate | 6.13e-07 | 82 |
gyrus | 7.17e-07 | 6 |
cerebellum | 8.02e-07 | 6 |
rhombic lip | 8.02e-07 | 6 |
regional part of cerebral cortex | 8.87e-07 | 22 |