FFCP PHASE1:Hg19::chr20:20066033..20066042,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26074 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15872 | |||
|TSSclassifier=strong | |||
|UniProt=C9JA66 | |||
|association_with_transcript=-63bp_to_ENST00000377297,ENST00000442372_5end | |||
|coexpression_cluster_id=C2608 | |||
|description=CAGE_peak_5_at_C20orf26_5end | |||
|id=chr20:20066033..20066042,+ | |||
|ontology_enrichment_celltype=CL:0000148!7.55e-08!10;CL:0000541!7.55e-08!10;CL:0002567!2.29e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.90e-29;10!CL:0002567;2.99e-25;3!CL:0000147;3.55e-21;14!CL:0002566;1.08e-19;1!CL:0000710;5.98e-15;20!CL:0000075;3.63e-11;27!CL:0002077;7.03e-09;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.90e-29,10;CL:0000541,1.90e-29,10;CL:0002567,2.99e-25,3;CL:0000147,3.56e-21,14;CL:0002566,1.08e-19,1;CL:0000710,5.98e-15,20;CL:0000075,3.63e-11,27;CL:0002077,6.25e-09,34;CL:0000333,4.08e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0010226;3.56e-19;1 | |||
|ontology_enrichment_disease=DOID:114!1.22e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:114;4.32e-37;2!DOID:178;3.56e-19;1!DOID:326;3.56e-19;1!DOID:3978;3.56e-19;1!DOID:3394;3.56e-19;1!DOID:5844;3.56e-19;1!DOID:1287;4.10e-19;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.28e-37,2;DOID:178,2.71e-19,1;DOID:326,2.71e-19,1;DOID:3978,2.71e-19,1;DOID:3394,2.71e-19,1;DOID:5844,2.71e-19,1;DOID:1287,3.57e-19,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.45e-25!115;UBERON:0002240!5.62e-14!3;UBERON:0001049!8.60e-10!57;UBERON:0005068!8.60e-10!57;UBERON:0006241!8.60e-10!57;UBERON:0007135!8.60e-10!57;UBERON:0000341!9.82e-10!2;UBERON:0005174!1.44e-08!5;UBERON:0001137!1.44e-08!5;UBERON:0002346!1.52e-08!90;UBERON:0003103!2.20e-08!69;UBERON:0002308!6.80e-08!9;UBERON:0000125!6.80e-08!9;UBERON:0003075!7.13e-08!86;UBERON:0007284!7.13e-08!86;UBERON:0002420!9.14e-08!9;UBERON:0007245!9.14e-08!9;UBERON:0010009!9.14e-08!9;UBERON:0010011!9.14e-08!9;UBERON:0000454!9.14e-08!9;UBERON:0007100!1.62e-07!27;UBERON:0001723!3.84e-07!3;UBERON:0004151!3.84e-07!3;UBERON:0001033!3.84e-07!3;UBERON:0010056!3.84e-07!3;UBERON:0003076!3.87e-07!15;UBERON:0003057!3.87e-07!15;UBERON:0006331!5.18e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;3.56e-19;1!UBERON:0001389;3.56e-19;1!UBERON:0000026;3.56e-19;1!UBERON:0008784;3.56e-19;1!UBERON:0006058;3.56e-19;1!UBERON:0003663;3.56e-19;1!UBERON:0004256;3.56e-19;1!UBERON:0002082;3.56e-19;1!UBERON:0004708;3.56e-19;1!UBERON:0002101;3.56e-19;1!UBERON:0004709;3.56e-19;1!UBERON:0002529;3.56e-19;1!UBERON:0010538;3.56e-19;1!UBERON:0003661;3.56e-19;1!UBERON:0010890;3.56e-19;1!UBERON:0002471;3.56e-19;1!UBERON:0001383;3.56e-19;1!UBERON:0010758;3.56e-19;1!UBERON:0010707;3.56e-19;1!UBERON:0000978;3.56e-19;1!UBERON:0002103;3.56e-19;1!UBERON:0001665;3.56e-19;1!UBERON:0003823;3.56e-19;1!UBERON:0000154;3.56e-19;1!UBERON:0010709;3.56e-19;1!UBERON:0007100;7.06e-12;25!UBERON:0005090;2.85e-10;2!UBERON:0001630;2.85e-10;2!UBERON:0001723;2.88e-07;3!UBERON:0004151;2.88e-07;3!UBERON:0001033;2.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,2.25e-19,1;UBERON:0001389,2.25e-19,1;UBERON:0000026,2.25e-19,1;UBERON:0008784,2.25e-19,1;UBERON:0006058,2.25e-19,1;UBERON:0003663,2.25e-19,1;UBERON:0004256,2.25e-19,1;UBERON:0004708,2.25e-19,1;UBERON:0002101,2.25e-19,1;UBERON:0004709,2.25e-19,1;UBERON:0002529,2.25e-19,1;UBERON:0010538,2.25e-19,1;UBERON:0003661,2.25e-19,1;UBERON:0010890,2.25e-19,1;UBERON:0002471,2.25e-19,1;UBERON:0001383,2.25e-19,1;UBERON:0004357,2.25e-19,1;UBERON:0004347,2.25e-19,1;UBERON:0005420,2.25e-19,1;UBERON:0005732,2.25e-19,1;UBERON:0010758,2.25e-19,1;UBERON:0010707,2.25e-19,1;UBERON:0000978,2.25e-19,1;UBERON:0002103,2.25e-19,1;UBERON:0001665,2.25e-19,1;UBERON:0003823,2.25e-19,1;UBERON:0000154,2.25e-19,1;UBERON:0010709,2.25e-19,1;UBERON:0005733,2.25e-19,1;UBERON:0005730,2.25e-19,1;UBERON:0002084,4.69e-19,1;UBERON:0002082,4.69e-19,1;UBERON:0010226,4.69e-19,1;UBERON:0007100,5.12e-11,27;UBERON:0005090,2.27e-10,2;UBERON:0001630,2.27e-10,2;UBERON:0004151,3.16e-07,3;UBERON:0001723,3.35e-07,3;UBERON:0001033,3.35e-07,3;UBERON:0010056,3.35e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,6.79427468926209,3.05590740446622,5.86087236050235,0,0,0,2.00078502841405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.916641696046735,0,1.79711100449092,7.2968428183217,1.33902874465124,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0,1.94228651156368,1.43727929598746,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0.196308467114945,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0.213233981900981,0.23806443146374,0,0,0,0.0636471582781649,0,0.870866991587845,1.02669990325584,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@C20orf26 | |||
}} |
Revision as of 10:27, 21 January 2014
Short description: | p5@C20orf26 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_C20orf26_5end |
Coexpression cluster: | C2608_Melanocyte_heart_skeletal_melanoma_left_umbilical_carcinoid |
Association with transcript: | -63bp_to_ENST00000377297, ENST00000442372_5end |
EntrezGene: | C20orf26 |
HGNC: | 15872 |
UniProt: | C9JA66 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.90e-29 | 10 |
melanoblast | 1.90e-29 | 10 |
light melanocyte | 2.99e-25 | 3 |
pigment cell | 3.56e-21 | 14 |
dark melanocyte | 1.08e-19 | 1 |
neurecto-epithelial cell | 5.98e-15 | 20 |
columnar/cuboidal epithelial cell | 3.63e-11 | 27 |
ecto-epithelial cell | 6.25e-09 | 34 |
migratory neural crest cell | 4.08e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.28e-37 | 2 |
vascular disease | 2.71e-19 | 1 |
ischemia | 2.71e-19 | 1 |
extrinsic cardiomyopathy | 2.71e-19 | 1 |
myocardial ischemia | 2.71e-19 | 1 |
myocardial infarction | 2.71e-19 | 1 |
cardiovascular system disease | 3.57e-19 | 4 |