FFCP PHASE1:Hg19::chr20:30606642..30606653,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=140706 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16153 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-367bp_to_ENST00000452892_5end | |||
|description=CAGE_peak_1_at_C20orf160_5end | |||
|id=chr20:30606642..30606653,+ | |||
|ontology_enrichment_celltype=CL:0000860!4.82e-17!45;CL:0002057!5.47e-17!42;CL:0002194!1.01e-09!63;CL:0000576!1.01e-09!63;CL:0000040!1.01e-09!63;CL:0000559!1.01e-09!63;CL:0002009!5.41e-09!65;CL:0000766!1.17e-08!76;CL:0000839!3.38e-08!70;CL:0000557!6.83e-08!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.35e-29;33!CL:0002057;1.35e-29;33!CL:0000473;2.96e-19;39!CL:0000234;2.96e-19;39!CL:0000576;1.80e-12;48!CL:0002322;1.68e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.58e-23,42;CL:0002057,7.58e-23,42;CL:0000473,7.05e-19,48;CL:0000234,7.05e-19,48;CL:0002194,2.10e-13,59;CL:0000576,2.10e-13,59;CL:0000040,2.10e-13,59;CL:0000559,2.10e-13,59;CL:0000766,8.93e-13,72;CL:0002009,1.04e-12,61;CL:0000839,3.64e-11,66;CL:0000557,6.92e-11,67;CL:0002322,1.72e-09,5;CL:0000763,4.58e-07,108;CL:0000049,4.58e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.54e-16;42 | |||
|ontology_enrichment_disease=DOID:305!2.30e-09!106;DOID:0050687!9.64e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.55e-19!115;UBERON:0001017!5.42e-12!82;UBERON:0001049!1.83e-11!57;UBERON:0005068!1.83e-11!57;UBERON:0006241!1.83e-11!57;UBERON:0007135!1.83e-11!57;UBERON:0005743!2.95e-11!86;UBERON:0000955!4.41e-10!69;UBERON:0006238!4.41e-10!69;UBERON:0000073!4.82e-10!94;UBERON:0001016!4.82e-10!94;UBERON:0003080!5.27e-09!42;UBERON:0002616!5.93e-09!59;UBERON:0002780!1.13e-08!41;UBERON:0001890!1.13e-08!41;UBERON:0006240!1.13e-08!41;UBERON:0001893!2.92e-08!34;UBERON:0000062!3.11e-08!511;UBERON:0003075!6.01e-08!86;UBERON:0007284!6.01e-08!86;UBERON:0002791!8.50e-08!33;UBERON:0002346!8.99e-08!90;UBERON:0002020!9.01e-08!34;UBERON:0003528!9.01e-08!34;UBERON:0000468!9.90e-08!659;UBERON:0001869!1.87e-07!32;UBERON:0002619!3.23e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.98e-08;20!UBERON:0002619;1.92e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,1.50e-09,93;UBERON:0002193,5.19e-09,108;UBERON:0002371,9.98e-09,76;UBERON:0002390,1.43e-08,98;UBERON:0003061,1.43e-08,98;UBERON:0001950,3.97e-08,20;UBERON:0001474,1.41e-07,82;UBERON:0001049,1.52e-07,56;UBERON:0005068,1.52e-07,56;UBERON:0006241,1.52e-07,56;UBERON:0007135,1.52e-07,56;UBERON:0001017,3.26e-07,81;UBERON:0001893,3.40e-07,34;UBERON:0002619,3.57e-07,22;UBERON:0007023,5.49e-07,114;UBERON:0001869,7.43e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0.940364164434263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601633342410425,0.217010870715852,0,0,0,1.59938062657521,2.26725566213286,5.09426528494414,2.55671940596253,1.23350366406548,5.26500830521676,2.58923153089935,1.2808035326455,5.20260905754887,2.75796544589295,4.51839278508678,6.77132432971709,0.752969358170419,2.18324920046277,6.29225756446237,3.36692281607993,4.49300637906531,8.31138263538754,0.659702600373432,0.797854630486527,2.13112375266347,7.54544020434318,6.80862269629368,16.8162007228805,2.51248665256743,1.5644487552606,3.04064382587163,6.05399502633369,14.362827803515,15.5066569846033,0.211255286311942,0.425208599930087,0.209658645508376,0,0.150176892841506,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63723844372141,0,0,0,0,0,0,0.571994910780128,0,0.39752481473341,0,1.38856200643038,1.13061588384802,0,0.550236083880135,0.208994966536811,0.258416759169329,0.71153252537342,1.67360306382335,0,0,1.22031028774085,1.10298924103761,1.62028389576352,0.803697554556718,0.44905874525234,0.337834441449967,0,0,0.366403487860815,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,7.19644866164613,5.03613119621644,4.64775771478074,5.39037486079926,5.55105871926382,9.12443397689575,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0.196221465125346,0,2.21446636387394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,1.58803092537181,1.85194205030644,0.380508304469197,1.58040879591855,5.15091697256924,0,0.234004265139238,0.594524649154913,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,5.9832291840805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.533637789017222,0.909382714338778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0.680374821106063,0.431831832204279,1.54227252690289,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0.330037999682352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,5.02073134299124,0,0,0,1.44269212976445,0,0.956557636372934,2.59453182862662,0,0,0,0.561594356226918,0,0,0,0.169291777801603,0,0,0,1.37402137902306,0.307240764308458,0,0.166849141711909,0,0,0,0.270455678475983,0,0,0,0.879049075631364,0.485442086998054,0,0.568272293612826,0,0.296964680832639,0,0,1.26602474769461,0,0.16480387422676,0.63337622438398,0.796991953004279,1.10513566212459,0.755798243562828,0.102268682502155,0.369254416383208,0,0.269605053441981,0.179021174675609,0,0.0986434056369336,0,0,0.969332746095218,1.20598527610407,1.99613798001194,1.30213880542617,0.174919999992391,0.724999575434793,0.1137934482855,0,0.236387681767936,2.41320361269025,3.2076507472158,0.520874984799877,0.885741385813839,1.92954301800653,1.52581736317083,1.10579259931225,0.886642856860642,0.87754158861589,0.10893846351899,0.83654246567162,0.769502585037971,0.341826167541004,0.46112780877612,0.359030577639089,0.217294743844016,0.957003479195758,0,0.533034776018635,0,0,0,0,0,0,0.189753732724185,0,3.37596903244843,1.79556088975062,0.141353071433941,0,0,0.619202951523374,0.611030144933625,1.77912677208373,1.35920332841153,1.56632924258183,1.28062152663286,0.802577647298789,0,0.182454789215666,1.9566461893209,0.485560759068186,0.394584402849391,0,0.61214552326098,0.821425535170343,4.20905574360579,0,0.664653872707185,0,0.313932918407225,0,5.69219092059585,0.832048038078832,0.173559738335131,0.489961987071888,0.870592065804026,0.698906672968121,0,0.19351266257817,0.219267951258557,0.0821154570532092,0.0969890164884194,0,0.677942222341597,0,0,1.39283751102933,0.195551382734803,0,0.640358984218058,0.599428828746391,0.288180834308212,0.572682980829578,4.97625493799697,0.14405479798815,0,0.235694034616795,0,0.209205692624666,0.305994652908965,0,0,0.547621515567972,0,0,0,0.837847203816763,2.7499250881402,2.15361907373044,2.39614800598789,2.57535628881943,2.00854311697685,1.61240333968143,0,3.49487848582361,0,0.0824158583811665,0.0674035438541849,0.295282444544246,0,0.795229689809303,0.953423842781029,1.76828463311521,3.98864366131978,2.9080823662043,0,0,1.57948847310864,0,0.551639951094387,0.891727998294968,0,0,2.30298236783334,0.714695326373367,0.662091970365432,0,0,0,0,0,0.164185041498678,0,0,0.146552233678082,0,0.387848869084652,0.39669780522807,0,0,0.427149650270779,0.157204305099666,1.24271716604159,0,0.197611631897944,0,1.27668251554036,0,0.2506898940227,0,0,0.314108192500469,0,0.610131324509816,1.001527445652,0,0.998361463831671,1.490313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| |||
|short_description=p1@C20orf160 | |||
}} |
Revision as of 10:43, 21 January 2014
Short description: | p1@C20orf160 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_C20orf160_5end |
Coexpression cluster: | NA |
Association with transcript: | -367bp_to_ENST00000452892_5end |
EntrezGene: | C20orf160 |
HGNC: | 16153 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.58e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.58e-23 | 42 |
defensive cell | 7.05e-19 | 48 |
phagocyte | 7.05e-19 | 48 |
monopoietic cell | 2.10e-13 | 59 |
monocyte | 2.10e-13 | 59 |
monoblast | 2.10e-13 | 59 |
promonocyte | 2.10e-13 | 59 |
myeloid leukocyte | 8.93e-13 | 72 |
macrophage dendritic cell progenitor | 1.04e-12 | 61 |
myeloid lineage restricted progenitor cell | 3.64e-11 | 66 |
granulocyte monocyte progenitor cell | 6.92e-11 | 67 |
embryonic stem cell | 1.72e-09 | 5 |
myeloid cell | 4.58e-07 | 108 |
common myeloid progenitor | 4.58e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
immune system | 1.50e-09 | 93 |
hemolymphoid system | 5.19e-09 | 108 |
bone marrow | 9.98e-09 | 76 |
hematopoietic system | 1.43e-08 | 98 |
blood island | 1.43e-08 | 98 |
neocortex | 3.97e-08 | 20 |
bone element | 1.41e-07 | 82 |
neural tube | 1.52e-07 | 56 |
neural rod | 1.52e-07 | 56 |
future spinal cord | 1.52e-07 | 56 |
neural keel | 1.52e-07 | 56 |
central nervous system | 3.26e-07 | 81 |
telencephalon | 3.40e-07 | 34 |
regional part of cerebral cortex | 3.57e-07 | 22 |
adult organism | 5.49e-07 | 114 |
cerebral hemisphere | 7.43e-07 | 32 |