FFCP PHASE1:Hg19::chr20:31369159..31369166,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr20:31369159..31369166,+ | |||
|id=chr20:31369159..31369166,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.01e-23!5;CL:0000039!1.01e-15!7;CL:0000586!1.01e-15!7;CL:0000133!4.00e-08!59;CL:0000540!1.06e-07!6;CL:0000031!1.06e-07!6;CL:0000404!1.06e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.83e-63;5!CL:0002321;2.06e-21;15!CL:0000540;2.18e-14;6!CL:0000404;2.18e-14;6!CL:0000148;6.53e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.54e-63,5;CL:0000540,2.04e-14,6;CL:0000031,2.04e-14,6;CL:0000404,2.04e-14,6;CL:0000047,4.66e-11,8;CL:0000148,6.04e-09,10;CL:0000541,6.04e-09,10 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.71e-21;1!CL:0000031;2.18e-14;6!UBERON:0003056;7.02e-08;3 | |||
|ontology_enrichment_disease=DOID:3095!1.11e-14!22;DOID:2994!1.11e-14!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;5.71e-21;1!UBERON:0001785;5.71e-21;1!UBERON:0002464;5.71e-21;1!UBERON:0004904;5.71e-21;1!UBERON:0001021;5.71e-21;1!UBERON:0003714;3.52e-11;2!UBERON:0005162;3.52e-11;2!UBERON:0000122;3.52e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,7.72e-21,1;UBERON:0001785,7.72e-21,1;UBERON:0002464,7.72e-21,1;UBERON:0004904,7.72e-21,1;UBERON:0001021,7.72e-21,1;UBERON:0003902,7.72e-21,1;UBERON:0005425,7.72e-21,1;UBERON:0003714,4.09e-11,2;UBERON:0005162,4.09e-11,2;UBERON:0000122,4.09e-11,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,1.58565817968474,1.72288698817931,1.85910308591229,0.829288440122964,2.27088765788066,1.45990943630332,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0.199579371432817,0,0.423347165447766,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0.108647371922008,0,0,0,1.02193298195737,0,0,0.225595660617181,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0.482259445395058,2.75078873194468,3.32352270423348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0.218531143927391,0.253397002022874,0.407955318967927,0.534434810531121,0,3.0084904715085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:31369159..31369166,+ | |||
}} |
Revision as of 10:46, 21 January 2014
Short description: | p@chr20:31369159..31369166, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:31369159..31369166, + |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.54e-63 | 5 |
neuron | 2.04e-14 | 6 |
neuroblast | 2.04e-14 | 6 |
electrically signaling cell | 2.04e-14 | 6 |
neuronal stem cell | 4.66e-11 | 8 |
melanocyte | 6.04e-09 | 10 |
melanoblast | 6.04e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 7.72e-21 | 1 |
cranial nerve | 7.72e-21 | 1 |
nerve trunk | 7.72e-21 | 1 |
nerve connecting eye with brain | 7.72e-21 | 1 |
nerve | 7.72e-21 | 1 |
retinal neural layer | 7.72e-21 | 1 |
presumptive neural retina | 7.72e-21 | 1 |
neural tissue | 4.09e-11 | 2 |
multi cell component structure | 4.09e-11 | 2 |
neuron projection bundle | 4.09e-11 | 2 |