FFCP PHASE1:Hg19::chr3:112357721..112357832,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C333 | |||
|description=CAGE_peak_at_chr3:112357721..112357832,+ | |||
|id=chr3:112357721..112357832,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.04e-26!180;CL:0000057!6.81e-18!75;CL:0000680!1.07e-12!57;CL:0000056!1.07e-12!57;CL:0000355!1.07e-12!57;CL:0000187!1.01e-11!54;CL:0002620!8.31e-11!23;CL:0000183!1.47e-09!59;CL:0000393!2.16e-09!60;CL:0000211!2.16e-09!60;CL:0000192!1.83e-08!42;CL:0000514!1.83e-08!42;CL:0002334!3.84e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0002620;7.06e-11;23!CL:0002334;6.10e-10;12!CL:0000134;1.32e-08;55!CL:0000057;9.24e-08;73!CL:0000723;2.44e-07;61!CL:0002320;3.42e-07;188!CL:0000048;4.24e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.82e-21,76;CL:0002620,4.49e-11,23;CL:0000680,7.57e-11,58;CL:0000056,7.57e-11,58;CL:0000355,7.57e-11,58;CL:0002334,5.92e-10,12;CL:0000187,9.70e-10,55;CL:0000048,1.17e-08,427;CL:0000723,5.55e-08,433;CL:0000393,1.13e-07,61;CL:0000211,1.13e-07,61;CL:0000034,3.93e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!5.09e-14!70;UBERON:0000914!1.02e-13!83;UBERON:0002329!1.02e-13!83;UBERON:0003077!1.02e-13!83;UBERON:0003059!1.02e-13!83;UBERON:0007282!1.02e-13!83;UBERON:0009618!1.02e-13!83;UBERON:0007285!1.02e-13!83;UBERON:0002385!1.00e-12!63;UBERON:0001015!1.00e-12!63;UBERON:0000383!1.00e-12!63;UBERON:0001134!1.74e-12!61;UBERON:0002036!1.74e-12!61;UBERON:0003082!1.74e-12!61;UBERON:0000486!3.24e-12!82;UBERON:0004923!5.07e-11!57;UBERON:0004872!2.22e-09!84;UBERON:0002199!4.69e-09!45;UBERON:0002416!4.69e-09!45;UBERON:0000948!6.13e-08!24;UBERON:0005498!6.13e-08!24;UBERON:0004140!6.13e-08!24;UBERON:0009881!6.13e-08!24;UBERON:0004141!6.13e-08!24;UBERON:0003084!6.13e-08!24;UBERON:0007005!6.13e-08!24;UBERON:0004139!6.13e-08!24;UBERON:0004291!6.13e-08!24;UBERON:0000475!8.78e-08!365;UBERON:0000468!1.08e-07!659;UBERON:0001013!1.09e-07!14;UBERON:0005256!1.37e-07!143;UBERON:0007100!2.92e-07!27;UBERON:0002097!3.79e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.92e-09;14!UBERON:0002385;3.11e-08;31!UBERON:0001015;3.11e-08;31!UBERON:0000383;3.11e-08;31!UBERON:0000948;7.91e-08;22!UBERON:0002384;2.13e-07;198!UBERON:0004457;7.10e-07;9!UBERON:0000042;7.10e-07;9!UBERON:0002199;9.20e-07;46!UBERON:0002416;9.20e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.73e-12,73;UBERON:0002329,2.72e-12,71;UBERON:0003059,2.72e-12,71;UBERON:0007282,2.72e-12,71;UBERON:0004290,2.72e-12,71;UBERON:0009618,2.72e-12,71;UBERON:0003077,6.65e-12,72;UBERON:0007285,6.65e-12,72;UBERON:0002385,8.55e-11,64;UBERON:0001015,8.55e-11,64;UBERON:0000383,8.55e-11,64;UBERON:0001134,1.07e-10,62;UBERON:0002036,1.07e-10,62;UBERON:0003082,1.07e-10,62;UBERON:0000486,1.22e-10,83;UBERON:0007503,2.68e-10,78;UBERON:0002199,8.66e-10,46;UBERON:0002416,8.66e-10,46;UBERON:0001013,2.24e-09,14;UBERON:0000948,6.74e-09,24;UBERON:0005498,6.74e-09,24;UBERON:0004140,6.74e-09,24;UBERON:0009881,6.74e-09,24;UBERON:0004141,6.74e-09,24;UBERON:0003084,6.74e-09,24;UBERON:0007005,6.74e-09,24;UBERON:0004139,6.74e-09,24;UBERON:0004291,6.74e-09,24;UBERON:0004872,4.43e-08,83;UBERON:0000926,6.24e-08,315;UBERON:0004120,6.24e-08,315;UBERON:0006603,6.24e-08,315;UBERON:0005256,1.22e-07,122;UBERON:0003104,1.46e-07,160;UBERON:0009142,1.46e-07,160;UBERON:0002097,1.70e-07,41;UBERON:0007100,3.47e-07,27;UBERON:0004923,8.57e-07,66 | |||
|phase1_expression=4.72363786103447,34.0419832986663,16.2097564710367,27.0197905553452,47.8248371037198,42.7445876809181,2.53299878168311,5.05375898741465,13.0592814099919,0.245733936501509,0,3.27662058195258,6.59417445571134,3.46545788288131,6.2965501388304,2.6893005858071,4.21886169616784,2.19093027116212,6.34312638427659,1.10808952269109,3.4680117511523,0.626909442956176,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,10.7312137552582,15.9828202304413,39.0354284575332,3.00802746381534,27.3759920835957,0,5.35298357332899,0.189069634328136,2.21729397462564,1.14185221401064,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.488124115096339,0.367663080345869,0.81014194788176,0,0,0.337834441449967,0,0,0,0,0,0,83.4912878848135,21.1472954479848,9.93068856099141,109.858425746796,25.8907919004801,14.0169400035577,1.06748995729705,4.9333509683432,2.17847724779836,1.88594940897563,2.94231425604226,1.51357427644931,4.60940739583999,0,1.5608003841516,0.570471821544449,2.98897361103602,3.40560046066918,2.75184005425824,3.79217178096071,0.61246251376468,0.61417158655884,0.206651562351531,0,1.48360157567134,0,1.43723628363248,0,0.250237039743928,0,0.438977620880838,4.29082914118628,1.35214253015937,2.26864366320042,65.1184377550569,11.7456563850212,16.3187563892863,54.3164883912768,6.69841440049853,28.5980999450648,4.46680455195816,19.9156072044694,6.33340533547791,53.2635263655082,11.3221375330028,5.33431987502079,74.1970048359724,6.54888638479662,3.89989362314122,0.193260853163297,0,0,0,0,0.116193942869518,0.207322110030741,0.504641701751257,0,0,17.3675053312079,1.38134921352481,11.6091982007995,20.2126254867484,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0.392442930250692,0,0,0,1.2347220339942,1.47008711385542,0,0,0,0,0.122988438543114,0.857839051492628,0.329250856225877,0,0.301586917234893,0.185176890317059,0,0,0,0.579652024875384,1.52631302506568,0.288732895522148,1.85194205030644,0.570762456703795,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.53735113621709,0.290633938513962,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,1.71072446022705,0.308482478109971,0,0,0.336393253036082,2.1798003441664,2.0534720029866,2.45616259939778,3.57656445851882,5.917119267892,1.06375246633948,4.16029747645464,1.02882949704857,1.41849132023278,1.5985330740966,4.00338382242813,0,0.823240336780769,2.28015329005615,1.06617584622764,7.12756685640086,2.41151501647669,0,3.69900067373611,0,0,0,5.03212196532324,10.3375742250703,0,8.68687840005475,5.75333703141074,1.25342674267927,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,5.39842563564216,14.004774589671,4.6115054028955,26.8282411374741,38.0053746137955,26.494005725701,16.1655152689944,1.80567659836631,0,1.03473071292505,9.29915837949611,1.84369168541703,2.08520674723399,0,0,0,0,0,4.85004114314015,11.6504807657348,5.74541557326393,10.4205279283886,8.90079445070762,19.9268667047482,23.577603463049,2.55853624533352,65.145838063161,17.8101679733989,13.2620336670284,5.85953693533319,6.40591816907711,6.23105315020345,21.8475511504723,0.120859449591622,0.40101294060657,0.184161977871793,5.85553685639494,10.0150142403694,11.2766996865105,0.451199612907412,0.15403067420883,0,0,0,0,0,1.0795795805107,0,0.270946437543853,0,0,0,0,0,0,1.53870075069834,0.656029291399411,0.976135183992909,0,1.37354197227515,0.495056999523528,0,0,11.2478750890912,1.35339005608971,3.08097234229289,3.22357716924872,3.44591431211326,3.33002759091648,5.94568445048337,2.30111894023472,9.25933170726069,0,0.192190067365106,0.127612712494584,0.2023155617111,16.269594225405,107.98063496291,0.6970372701606,2.15623506123262,1.59691809095107,0.869932992075073,2.59453906745488,0.572499546967965,1.116475108079,0.632758849437452,5.14701523594327,0.511795582622668,0.855877976067841,0.318203247925937,0.78494864019923,3.59744915166629,6.31435168392926,3.18093486333353,1.41527737101321,0,0.842516912477962,0.975267478179181,14.8665228675083,0,12.8309916723507,16.261624674677,13.5609739944291,0,11.2784625791007,2.63070531152258,0,1.31178950409327,0.405820753925408,2.478587984798,3.09865162785466,5.16280867934585,8.25291944510218,1.426684205925,1.06428319221179,34.6216521888169,98.4591729950107,0,1.39973888097993,0,0.670302275535787,0,0.188287601553558,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,1.96032172784825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,1.02555725490326,0,0,1.70481688083848,0.71623345421307,3.56357616999166,1.53580351049616,0,0,1.55832187032068,0,0,10.3608953890556,0.552567831062295,0,0,0,5.90975216557434,0.269605053441981,0,0,1.7755813014648,0,0,0.969332746095218,0.0927680981618513,0,0,0,1.44999915086959,0.227586896570999,1.01701460117107,0,0,0,0.173624994933292,1.77148277162768,0,3.05163472634166,0.110579259931225,0,0,0,1.673084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| |||
|short_description=p@chr3:112357721..112357832,+ | |||
}} |
Revision as of 20:32, 21 January 2014
Short description: | p@chr3:112357721..112357832, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr3:112357721..112357832, + |
Coexpression cluster: | C333_Fibroblast_Smooth_Preadipocyte_Adipocyte_Ewing_Placental_sacrococcigeal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.82e-21 | 76 |
skin fibroblast | 4.49e-11 | 23 |
muscle precursor cell | 7.57e-11 | 58 |
myoblast | 7.57e-11 | 58 |
multi-potent skeletal muscle stem cell | 7.57e-11 | 58 |
preadipocyte | 5.92e-10 | 12 |
muscle cell | 9.70e-10 | 55 |
multi fate stem cell | 1.17e-08 | 427 |
somatic stem cell | 5.55e-08 | 433 |
electrically responsive cell | 1.13e-07 | 61 |
electrically active cell | 1.13e-07 | 61 |
stem cell | 3.93e-07 | 441 |