FFCP PHASE1:Hg19::chr3:159570899..159570917,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29970 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15678 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=118bp_to_ENST00000482885_5end | |||
|coexpression_cluster_id=C4298 | |||
|description=CAGE_peak_25_at_SCHIP1_5end | |||
|id=chr3:159570899..159570917,+ | |||
|ontology_enrichment_celltype=CL:0002139!9.52e-23!24;CL:0000115!1.03e-19!35;CL:0000071!4.96e-16!18;CL:0002546!4.96e-16!18;CL:0002078!5.78e-16!44;CL:0000213!3.31e-13!57;CL:0000215!3.31e-13!57;CL:0005020!2.09e-08!6;CL:0002138!2.09e-08!6;CL:0005022!2.09e-08!6;CL:0002543!2.45e-08!6;CL:0000076!5.75e-08!62 | |||
|ontology_enrichment_celltype_v019=CL:0002139;9.79e-53;24!CL:0000115;1.02e-39;36!CL:0000071;6.16e-38;18!CL:0002078;8.02e-26;45!CL:0000213;8.54e-21;58!CL:0000215;8.54e-21;58!CL:0002543;1.81e-16;6!CL:0002138;2.62e-16;6!CL:0002544;2.64e-15;6!CL:1000413;2.87e-14;9!CL:0002618;6.90e-13;3!CL:0002144;1.39e-11;3!CL:0000076;9.71e-08;63!CL:0002188;1.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.60e-53,24;CL:0000115,1.67e-50,36;CL:0002078,3.15e-39,45;CL:0000071,8.11e-38,18;CL:0002546,8.11e-38,18;CL:0000213,7.68e-32,58;CL:0000215,7.68e-32,58;CL:0005020,1.48e-16,6;CL:0002138,1.48e-16,6;CL:0005022,1.48e-16,6;CL:0002543,2.39e-16,6;CL:0002544,2.61e-15,6;CL:1000413,3.68e-14,9;CL:0002618,7.07e-13,3;CL:0000222,3.32e-12,121;CL:0002144,9.76e-12,3;CL:0000076,1.72e-11,63;CL:0002188,1.23e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;6.16e-38;18!CL:0005022;2.62e-16;6!UBERON:0005062;9.73e-10;4!UBERON:0007284;9.73e-10;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!4.96e-16!18;UBERON:0004638!4.96e-16!18;UBERON:0004852!4.96e-16!18;UBERON:0000487!3.29e-15!22;UBERON:0006914!5.20e-14!25;UBERON:0000055!8.40e-09!69;UBERON:0000119!1.05e-08!312;UBERON:0000483!1.24e-08!309;UBERON:0004872!1.25e-08!84;UBERON:0001009!2.22e-08!113;UBERON:0002049!2.40e-08!79;UBERON:0007798!2.40e-08!79;UBERON:0004111!3.99e-08!241;UBERON:0001638!5.37e-08!9;UBERON:0003920!5.37e-08!9;UBERON:0004582!5.37e-08!9;UBERON:0000467!5.39e-08!625;UBERON:0000480!6.47e-08!626;UBERON:0000468!7.71e-08!659;UBERON:0007023!1.19e-07!115;UBERON:0004535!5.53e-07!110;UBERON:0000477!6.46e-07!286;UBERON:0003103!6.47e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.16e-38;18!UBERON:0001986;6.16e-38;18!UBERON:0004852;6.16e-38;18!UBERON:0000487;1.92e-30;22!UBERON:0006914;2.12e-26;25!UBERON:0000490;1.36e-19;33!UBERON:0003915;2.87e-14;9!UBERON:0004700;2.87e-14;9!UBERON:0001917;2.87e-14;9!UBERON:0003978;7.62e-13;3!UBERON:0000946;7.62e-13;3!UBERON:0004151;1.20e-12;3!UBERON:0001473;3.71e-12;8!UBERON:0004536;3.71e-12;8!UBERON:0006558;3.71e-12;8!UBERON:0010523;1.39e-11;3!UBERON:0001915;1.39e-11;3!UBERON:0001982;1.39e-11;3!UBERON:0000055;4.27e-11;65!UBERON:0001638;7.11e-11;9!UBERON:0003920;7.11e-11;9!UBERON:0004582;7.11e-11;9!UBERON:0002465;1.16e-09;10!UBERON:0005090;1.91e-09;2!UBERON:0001630;1.91e-09;2!UBERON:0001009;2.50e-09;112!UBERON:0007100;4.56e-09;25!UBERON:0002133;6.20e-09;2!UBERON:0002081;8.16e-09;2!UBERON:0000341;2.79e-08;2!UBERON:0007500;5.40e-08;56!UBERON:0001981;5.40e-08;56!UBERON:0004537;5.40e-08;56!UBERON:0002066;6.84e-08;5!UBERON:0004535;2.23e-07;109 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.11e-38,18;UBERON:0001986,8.11e-38,18;UBERON:0004852,8.11e-38,18;UBERON:0000487,2.39e-30,22;UBERON:0006914,2.58e-26,25;UBERON:0000055,3.97e-24,68;UBERON:0002049,2.68e-20,78;UBERON:0007798,2.68e-20,78;UBERON:0001009,3.68e-20,112;UBERON:0004535,1.60e-17,109;UBERON:0004872,6.79e-17,83;UBERON:0007500,1.70e-16,59;UBERON:0001981,1.70e-16,59;UBERON:0004537,1.70e-16,59;UBERON:0006965,1.70e-16,59;UBERON:0003915,3.68e-14,9;UBERON:0004700,3.68e-14,9;UBERON:0001917,3.68e-14,9;UBERON:0003914,5.23e-13,117;UBERON:0003978,7.07e-13,3;UBERON:0009751,7.07e-13,3;UBERON:0000946,7.07e-13,3;UBERON:0002523,7.07e-13,3;UBERON:0005983,7.07e-13,3;UBERON:0002165,7.07e-13,3;UBERON:0002062,7.07e-13,3;UBERON:0007280,7.07e-13,3;UBERON:0004151,1.38e-12,3;UBERON:0001473,2.43e-12,8;UBERON:0004536,2.43e-12,8;UBERON:0006558,2.43e-12,8;UBERON:0010523,9.76e-12,3;UBERON:0001915,9.76e-12,3;UBERON:0001982,9.76e-12,3;UBERON:0001638,8.51e-11,9;UBERON:0003920,8.51e-11,9;UBERON:0004582,8.51e-11,9;UBERON:0002465,8.35e-10,10;UBERON:0005090,1.80e-09,2;UBERON:0001630,1.80e-09,2;UBERON:0002133,5.98e-09,2;UBERON:0002081,9.57e-09,2;UBERON:0010227,9.57e-09,2;UBERON:0000341,2.14e-08,2;UBERON:0007100,2.84e-08,27;UBERON:0004111,5.10e-08,240;UBERON:0002066,6.94e-08,5;UBERON:0003081,3.08e-07,203;UBERON:0003103,5.24e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0.221729397462564,0,0.196468613246569,0,0,0,0,0,0,0,0,1.59009925893364,1.72046919021225,1.04142150482278,2.26123176769604,0,0.825354125820202,1.04497483268405,4.13466814670926,3.5576626268671,9.70689777017544,1.20848795132744,1.52054421143703,1.95249646038536,1.47065232138347,0,5.00078478390847,3.36794058939255,3.71617885594963,3.06633274931766,0.949265659568129,1.28241220751285,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.942974704487816,0.326923806226917,0,0,0,0,0,0,0.352303495931295,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0.573609190778008,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.100528972411631,0.185176890317059,0,0,1.44331342025273,0.231860809950154,0.352226082707465,1.73239737313289,0.925971025153221,1.71228737011138,0,0,0,0,0,0,0.839910640994298,0.141775097242386,0.268675568108545,0,0,0.492663237895943,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.22001485746285,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,2.60279707715243,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0.0868836144680828,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0,0,0,0.131124414959424,0,0.15403067420883,0,0,0,1.13733384070897,0.340187410553031,5.18198198645135,4.62681758070868,0,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0.183138929636687,0,0,0,0,0.096670718292122,0.462145851343933,0,0,0.107420244868274,0.145016693914229,0.170453254832202,0.0890320356467374,0.165284915360978,0.192190067365106,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0.288666338176536,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,5.01268954180134,0,0,0,0.851692475380653,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.586032717087576,0,0,0.284136146806413,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0.197286811273867,0,1.11136990144637,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.0769502585037971,0,0,0.179515288819544,0,5.74202087517455,0.183195186803725,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,5.61804353109152,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,1.71986032471617,0,0,0,0.484945082442097,0,0.225980740780532,0.548167698587004,0.397429223405979,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0.523014231561666,0,0,0,0.136905378891993,0,0,0,3.6306712165393,6.87481272035051,2.15361907373044,1.39775300349294,0.858452096273142,6.4719722658143,14.3772631121594,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.577000469484979,0.211200673038813,0,0.383830394638891,2.1440859791201,5.29673576292345,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.78602152549833,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,2.34167452903441,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0,0,1.06013487567529,0,0,0,0.690860683462397,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0,0.327628914576042,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0,0,0.294443155503077,0,0,0,0.381382095467167,0,0,0,0,0,0,0.163771917510097,0,0.135075169236789,0,0.413373593002368,0,0.546974809018219,0,0.992422356778588,0,0,0,0,0,0.227662191351298,0.79832133146375,0,0,0,0.0657727735628491,0.118193840883968,0,0.313972371402056,0,0,1.82631744101899,0,0,0.214429632529969,0,0,1.04314963381548,0,0,0.3414369541879,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,6.47428837187895,3.59319823996865,1.1598144313382,1.45713297917742,0,0,0,0,0,0,0.308696632431779,0.874238242015829,0,0.245148321753905,0,0.196308467114945,0,1.6906229103336,0,0.375935671919414,0.515663103788617,0,0,0.352894871715692,0,2.19100916473955,0,0.143339583151451,0,0,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,1.49263787330687,1.66645102024618,0,0,0,0.445530107947154,0.202117188958219,0.653150243690884,3.42233301085281,0.0673520530145875,0.286888821570705,0.665320713092027,0,0.106727345877715,0,0,0,0.733448665097199,0,0,0.201273793591026,0 | |||
|short_description=p25@SCHIP1 | |||
}} |
Revision as of 22:20, 21 January 2014
Short description: | p25@SCHIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_SCHIP1_5end |
Coexpression cluster: | C4298_heart_left_Endothelial_acute_Renal_skeletal_tongue |
Association with transcript: | 118bp_to_ENST00000482885_5end |
EntrezGene: | SCHIP1 |
HGNC: | 15678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.60e-53 | 24 |
endothelial cell | 1.67e-50 | 36 |
meso-epithelial cell | 3.15e-39 | 45 |
blood vessel endothelial cell | 8.11e-38 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.11e-38 | 18 |
lining cell | 7.68e-32 | 58 |
barrier cell | 7.68e-32 | 58 |
lymphangioblast | 1.48e-16 | 6 |
endothelial cell of lymphatic vessel | 1.48e-16 | 6 |
vascular lymphangioblast | 1.48e-16 | 6 |
vein endothelial cell | 2.39e-16 | 6 |
aortic endothelial cell | 2.61e-15 | 6 |
endothelial cell of artery | 3.68e-14 | 9 |
endothelial cell of umbilical vein | 7.07e-13 | 3 |
mesodermal cell | 3.32e-12 | 121 |
capillary endothelial cell | 9.76e-12 | 3 |
squamous epithelial cell | 1.72e-11 | 63 |
glomerular endothelial cell | 1.23e-07 | 5 |