FFCP PHASE1:Hg19::chr5:321810..321877,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57491 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=346 | |||
|TSSclassifier=strong | |||
|UniProt=E5RHE0 | |||
|association_with_transcript=0bp_to_ENST00000514523_5end | |||
|description=CAGE_peak_1_at_AHRR_5end | |||
|id=chr5:321810..321877,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.18e-31!180;CL:0000057!2.49e-20!75;CL:0002620!3.65e-12!23;CL:0000548!3.27e-11!679;CL:0000004!3.27e-11!679;CL:0000255!3.27e-11!679;CL:0000048!8.51e-11!430;CL:0000012!1.42e-10!682;CL:0002371!2.11e-10!591;CL:0000222!3.26e-10!119;CL:0000723!4.43e-10!436;CL:0000144!2.22e-09!625;CL:0000034!6.50e-09!444;CL:0000183!1.17e-08!59;CL:0000680!1.30e-08!57;CL:0000056!1.30e-08!57;CL:0000355!1.30e-08!57;CL:0000187!5.71e-08!54;CL:0000192!7.84e-07!42;CL:0000514!7.84e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002620;8.41e-13;23!CL:0000057;4.51e-08;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.70e-21,76;CL:0000048,3.10e-15,427;CL:0000723,2.76e-14,433;CL:0002620,7.77e-13,23;CL:0000034,1.17e-12,441;CL:0000222,2.65e-10,121;CL:0000219,1.60e-09,386;CL:0002320,3.34e-09,361;CL:0000680,5.93e-09,58;CL:0000056,5.93e-09,58;CL:0000355,5.93e-09,58;CL:0000187,2.83e-08,55;CL:0000134,5.06e-08,354;CL:0000192,4.65e-07,43;CL:0000514,4.65e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!9.09e-14!167;UBERON:0000914!4.97e-12!83;UBERON:0002329!4.97e-12!83;UBERON:0003077!4.97e-12!83;UBERON:0003059!4.97e-12!83;UBERON:0007282!4.97e-12!83;UBERON:0009618!4.97e-12!83;UBERON:0007285!4.97e-12!83;UBERON:0002097!6.35e-11!40;UBERON:0004290!1.80e-10!70;UBERON:0002199!4.05e-10!45;UBERON:0002416!4.05e-10!45;UBERON:0000926!3.17e-08!448;UBERON:0004120!3.17e-08!448;UBERON:0006603!3.17e-08!448;UBERON:0003102!4.66e-08!95;UBERON:0000486!6.99e-08!82;UBERON:0001134!1.71e-07!61;UBERON:0002036!1.71e-07!61;UBERON:0003082!1.71e-07!61;UBERON:0002385!4.63e-07!63;UBERON:0001015!4.63e-07!63;UBERON:0000383!4.63e-07!63;UBERON:0001637!7.41e-07!42;UBERON:0003509!7.41e-07!42;UBERON:0004572!7.41e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;3.26e-09;41!UBERON:0002199;3.75e-07;46!UBERON:0002416;3.75e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,8.73e-15,167;UBERON:0002097,7.94e-12,41;UBERON:0007503,6.62e-11,78;UBERON:0002199,7.31e-11,46;UBERON:0002416,7.31e-11,46;UBERON:0007524,1.10e-10,73;UBERON:0002329,1.19e-10,71;UBERON:0003059,1.19e-10,71;UBERON:0007282,1.19e-10,71;UBERON:0004290,1.19e-10,71;UBERON:0009618,1.19e-10,71;UBERON:0003077,3.51e-10,72;UBERON:0007285,3.51e-10,72;UBERON:0002384,4.13e-10,371;UBERON:0000486,6.89e-08,83;UBERON:0001134,1.50e-07,62;UBERON:0002036,1.50e-07,62;UBERON:0003082,1.50e-07,62;UBERON:0001434,2.24e-07,100;UBERON:0001637,3.96e-07,42;UBERON:0003509,3.96e-07,42;UBERON:0004572,3.96e-07,42;UBERON:0003102,4.61e-07,99;UBERON:0000926,5.78e-07,315;UBERON:0004120,5.78e-07,315;UBERON:0006603,5.78e-07,315;UBERON:0002385,8.95e-07,64;UBERON:0001015,8.95e-07,64;UBERON:0000383,8.95e-07,64 | |||
|phase1_expression=9.44727572206894,4.71021152560163,7.89344662937438,9.00659685178174,3.5756887554183,2.61701557230111,0,0.631719873426831,2.61185628199839,2.7030733015166,1.39560233594486,0,0.527533956456907,11.0152054134441,12.9244976533887,6.05092631806598,9.04041792035965,11.684961446198,18.0535135552488,8.00286877499121,10.6080359447012,2.19418305034661,2.28988789704845,2.18999080116615,3.13856598987007,7.33568695180332,5.91124244039609,4.48651453487972,0,0,0.928896739896456,0,0.30120591877825,0,0,0,0,0,0,0.217010870715852,6.49354875295781,11.9840656427022,10.0454471377333,17.8839833698865,6.42389104270976,12.8569552429543,10.2268776238501,7.81218987241469,7.43295290148249,10.0692337312753,9.73410684810582,6.3850202069918,5.5159308917859,1.93645405075148,2.70852973188684,9.78860165621544,9.5517152520246,8.31476892446813,10.4068523406107,6.41858054152187,9.59005688698562,9.89553900560148,11.9678194572979,13.2129672665135,4.64334781805734,5.10646702222026,7.4738669879469,10.80369260604,7.30076085788282,3.9093992046921,4.84319602106695,5.89244217580104,2.84816148696796,0,1.06302149982522,0.628975936525128,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0.205601498999509,10.0311897234407,0,0,0,12.2551502573691,0.883817722424512,0.221533894583621,0.270803863765016,10.247305578054,13.0059347559878,20.8836138846669,18.7918012094377,15.0697604582227,0,0,0,15.6366892922641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,2.01210257911091,1.66221330396589,15.1804444001518,23.5628817998868,11.2980284789442,11.1340032587154,12.6525066278685,0.0945348171640679,0,0.614843499851882,1.24430121722827,0,0,12.332800958878,13.9303789839414,6.64789802594326,0,0,0,2.78267370313387,5.16140757063675,3.12426451446835,10.1755429546322,8.80948816040802,6.87795104850169,7.73281376186199,8.0109195342492,6.75955899104749,3.68192674041137,5.23678112241891,6.0821768457481,8.29810995663776,8.08858776760911,5.67099363517232,2.23249320710199,1.34717623575702,1.35133776579987,12.2653309972707,10.4419222552494,9.34328894045077,0,0,0.436094052142534,16.8970463576408,9.24402735151432,12.9760997196954,13.4813211751942,10.6400514659507,11.7742296029885,2.1349799145941,6.90669135568048,4.35695449559673,5.11900553864815,8.17309515567294,0.908144565869588,0.576175924479999,4.45210720484214,13.1107232268735,11.9799082524334,15.8415601384909,11.508580867089,17.9678968248626,15.5900395439496,15.311562844117,21.9873427988065,25.2114906068868,16.6320400019487,26.4575614328056,7.28129089550421,13.6537446945085,20.0319975605339,22.3962150570816,12.190821081304,27.6555901154928,47.8120961446471,27.193088662094,2.26864366320042,33.7252515095061,18.1523780495782,17.5903477962436,47.71448427742,21.6410311400722,52.5586701693083,26.9869441680805,25.991555165155,13.9334917380514,48.46728465487,27.4308697954052,21.0139873864455,35.5009592516614,16.523344109333,28.8253006927829,0.193260853163297,0,0.860413786167011,0.487894824518382,0.132529768321485,0.813357600086629,1.34759371519982,0,0.72995471815166,37.5478877591558,47.5998294262735,55.2539685409922,6.03678306441573,17.3251075600701,21.8867580073711,19.892993429216,14.9426838527759,18.3087994735774,16.5588377510229,14.9480490039991,21.4381779974661,20.2108109079106,18.8526106903731,8.85786545549578,5.60967095213783,7.4083322039652,5.88034845542168,0,0,0.590789906681404,0,0.122988438543114,0.171567810298526,1.20725313949488,0,0.603173834469785,0.370353780634118,34.2098720575841,12.4792174233549,5.77325368101093,3.4779121492523,0.234817388471643,1.87676382089396,2.31492756288305,2.66355813128438,0,0.858486162094873,4.43190610957315,2.10603838625314,3.26988557035202,0,0.671928512795438,0.425325291727159,0.0895585227028483,0.290633938513962,0.766765358330422,0,1.40877494421162,4.35389042635621,1.29707958075265,4.4184851699233,24.2561956196086,51.5684374503675,36.3374086351146,42.7681115056763,32.5963151869536,22.2253862804499,44.5889234903702,1.34557301214433,0.43596006883328,0.2933531432838,3.23179289394444,21.4593867511129,5.071816515336,6.64845291462176,7.28052058379563,15.6896498299907,15.6034045225606,21.313774321288,8.00676764485626,6.51145926469732,6.58592269424615,3.58309802723109,5.68627117988073,2.37585561880029,3.01439377059586,6.10073421020206,1.09970290300263,18.2435670961786,13.5609414686674,12.6500363689819,13.179367052037,16.0806710167759,45.6438096130299,7.38384664004654,19.314774319736,9.84835297819426,0,0,0,0,3.04913549066956,0,1.54657762555539,0.167516265334349,1.27587750330633,0,0,0,7.23879801142925,18.0061387581484,7.5954206635926,22.4608530453272,35.8642267482295,29.3326491963119,13.471262724162,2.40756879782175,2.27407504055985,4.1389228517002,13.9487375692442,22.6774077306295,27.3683385574461,19.1885134313486,11.6668764095691,0,0,0.106727557803444,1.5156378572313,1.66435439510497,0.907170879989041,8.18755765801964,10.4354141835882,10.6650835884568,6.66323576129645,11.7692667285342,9.16867350518563,10.3892646511494,10.0236300971726,15.2703083769289,14.7007609264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| |||
|short_description=p1@AHRR | |||
}} |
Revision as of 04:26, 22 January 2014
Short description: | p1@AHRR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AHRR_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000514523_5end |
EntrezGene: | AHRR |
HGNC: | 346 |
UniProt: | E5RHE0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.70e-21 | 76 |
multi fate stem cell | 3.10e-15 | 427 |
somatic stem cell | 2.76e-14 | 433 |
skin fibroblast | 7.77e-13 | 23 |
stem cell | 1.17e-12 | 441 |
mesodermal cell | 2.65e-10 | 121 |
motile cell | 1.60e-09 | 386 |
connective tissue cell | 3.34e-09 | 361 |
muscle precursor cell | 5.93e-09 | 58 |
myoblast | 5.93e-09 | 58 |
multi-potent skeletal muscle stem cell | 5.93e-09 | 58 |
muscle cell | 2.83e-08 | 55 |
mesenchymal cell | 5.06e-08 | 354 |
smooth muscle cell | 4.65e-07 | 43 |
smooth muscle myoblast | 4.65e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 8.73e-15 | 167 |
skin of body | 7.94e-12 | 41 |
epithelial vesicle | 6.62e-11 | 78 |
integument | 7.31e-11 | 46 |
integumental system | 7.31e-11 | 46 |
dense mesenchyme tissue | 1.10e-10 | 73 |
somite | 1.19e-10 | 71 |
presomitic mesoderm | 1.19e-10 | 71 |
presumptive segmental plate | 1.19e-10 | 71 |
dermomyotome | 1.19e-10 | 71 |
trunk paraxial mesoderm | 1.19e-10 | 71 |
paraxial mesoderm | 3.51e-10 | 72 |
presumptive paraxial mesoderm | 3.51e-10 | 72 |
connective tissue | 4.13e-10 | 371 |
multilaminar epithelium | 6.89e-08 | 83 |
skeletal muscle tissue | 1.50e-07 | 62 |
striated muscle tissue | 1.50e-07 | 62 |
myotome | 1.50e-07 | 62 |
skeletal system | 2.24e-07 | 100 |
artery | 3.96e-07 | 42 |
arterial blood vessel | 3.96e-07 | 42 |
arterial system | 3.96e-07 | 42 |
surface structure | 4.61e-07 | 99 |
mesoderm | 5.78e-07 | 315 |
mesoderm-derived structure | 5.78e-07 | 315 |
presumptive mesoderm | 5.78e-07 | 315 |
muscle tissue | 8.95e-07 | 64 |
musculature | 8.95e-07 | 64 |
musculature of body | 8.95e-07 | 64 |