FFCP PHASE1:Hg19::chr5:95157986..95158004,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2745 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4330 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000507605_5end | |||
|coexpression_cluster_id=C246 | |||
|description=CAGE_peak_2_at_GLRX_5end | |||
|id=chr5:95157986..95158004,- | |||
|ontology_enrichment_celltype=CL:0000738!4.93e-29!140;CL:0000766!2.14e-28!76;CL:0002057!4.66e-24!42;CL:0002009!9.85e-24!65;CL:0000557!1.38e-23!71;CL:0002031!4.79e-23!124;CL:0000037!9.62e-23!172;CL:0000566!9.62e-23!172;CL:0002087!1.22e-22!119;CL:0002194!1.41e-22!63;CL:0000576!1.41e-22!63;CL:0000040!1.41e-22!63;CL:0000559!1.41e-22!63;CL:0000839!3.78e-22!70;CL:0000048!6.46e-22!430;CL:0000988!6.61e-22!182;CL:0000860!9.66e-22!45;CL:0002032!2.71e-21!165;CL:0000837!2.71e-21!165;CL:0000134!3.46e-21!358;CL:0002320!9.21e-21!365;CL:0000723!2.62e-20!436;CL:0000034!1.12e-19!444;CL:0000763!4.19e-19!112;CL:0000049!4.19e-19!112;CL:0000219!8.13e-17!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.23e-25;33!CL:0002057;5.23e-25;33!CL:0000473;2.75e-22;39!CL:0000234;2.75e-22;39!CL:0000576;1.84e-20;48!CL:0000766;4.59e-17;69!CL:0000094;8.52e-09;8!CL:0002087;1.54e-08;104!CL:0000763;1.88e-08;100!CL:0000081;6.04e-08;11!CL:0000738;1.73e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.06e-38,72;CL:0000738,1.27e-33,136;CL:0000473,3.46e-33,48;CL:0000234,3.46e-33,48;CL:0000557,2.31e-32,67;CL:0000860,7.76e-32,42;CL:0002057,7.76e-32,42;CL:0002009,1.48e-31,61;CL:0000839,6.37e-30,66;CL:0002194,6.39e-30,59;CL:0000576,6.39e-30,59;CL:0000040,6.39e-30,59;CL:0000559,6.39e-30,59;CL:0002031,2.55e-27,120;CL:0000037,1.19e-25,168;CL:0002087,3.52e-25,115;CL:0000988,1.89e-24,177;CL:0000763,3.37e-24,108;CL:0000049,3.37e-24,108;CL:0002032,6.80e-24,161;CL:0000837,6.80e-24,161;CL:0000134,3.00e-17,354;CL:0002320,2.12e-16,361;CL:0000048,3.74e-14,427;CL:0000219,8.71e-14,386;CL:0000034,1.52e-13,441;CL:0000723,2.86e-13,433;CL:0000094,1.06e-08,8;CL:0000081,5.77e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;4.32e-23;42!CL:0000049;1.15e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.14e-30!102;UBERON:0003061!1.14e-30!102;UBERON:0002193!8.42e-26!112;UBERON:0002371!6.65e-25!80;UBERON:0004765!6.96e-23!101;UBERON:0001434!6.96e-23!101;UBERON:0001474!1.26e-22!86;UBERON:0002384!7.56e-20!375;UBERON:0002204!1.27e-19!167;UBERON:0002405!2.63e-13!115;UBERON:0003081!7.88e-13!216;UBERON:0000178!4.11e-07!15;UBERON:0000179!4.11e-07!15;UBERON:0000463!4.11e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.68e-09;15!UBERON:0000179;9.68e-09;15!UBERON:0000463;9.68e-09;15!UBERON:0002390;3.61e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.43e-39,98;UBERON:0003061,1.43e-39,98;UBERON:0002371,1.02e-33,76;UBERON:0002193,6.57e-33,108;UBERON:0001474,2.47e-29,82;UBERON:0004765,2.13e-27,90;UBERON:0002405,1.86e-25,93;UBERON:0001434,1.04e-24,100;UBERON:0002384,3.89e-16,371;UBERON:0003081,4.01e-16,203;UBERON:0002204,8.81e-15,167;UBERON:0000926,7.14e-09,315;UBERON:0004120,7.14e-09,315;UBERON:0006603,7.14e-09,315;UBERON:0000178,1.48e-08,15;UBERON:0000179,1.48e-08,15;UBERON:0000463,1.48e-08,15 | |||
|phase1_expression=1.09007027562334,0.642301571672949,1.83240725324762,1.0007329835313,0.446961094427288,0,2.53299878168311,1.89515962028049,0.261185628199839,1.47440361900905,0,0.873765488520689,0.791300934685361,0.866364470720326,0,1.34465029290355,0.602694528023977,2.92124036154949,1.95173119516203,0.123121058076788,0,0,0,0.273748850145768,0.251085279189606,0.61130724598361,0.57470412614962,1.10195093839151,6.29382842958246,4.22212337906934,2.47705797305722,0,0.30120591877825,0.369754010166788,0.309868802321207,0.142169232487422,2.05520307534393,3.32397245119126,0.802177789880567,2.60413044859022,1.79132379391939,1.29557466407592,1.54545340580512,7.56070841653736,4.91238726795452,5.09426528494414,4.41615170120801,2.46700732813095,3.09706370895104,2.8769239232215,3.33008918487831,6.85798466676897,5.86067657252252,7.74581620300591,5.41705946377367,6.58848188399116,4.09359225086769,7.19115150224271,4.59125838556354,5.45579346029359,5.11469700639233,6.59702600373432,3.98927315243264,4.26224750532694,3.77272010217159,0.56738522469114,5.60540024096017,4.27122730936464,4.69334626578181,4.56096573880745,5.44859552370032,8.47038562771399,10.1267963981083,2.95757400836718,3.61427309940574,5.66078342872615,7.63834691796167,7.65902153491682,5.78612112109488,2.28010194992999,2.58591680358817,1.64397738388171,1.75996244461323,3.27683166757279,2.66852776159066,0.853460445133014,2.40237592221607,4.59801951963587,2.64417949113945,0,0.569212969109448,0.587237189370939,0,3.96513985737078,2.24203425192614,1.58030450865046,0.196709770113833,0.786021525498329,1.02800749499755,1.5046784585161,3.91106719960308,4.73447805734733,1.94826728407911,1.78256731016278,3.82987679717288,5.98141515375777,4.60366568400527,1.5370958367081,1.56071217071854,0.822189523018381,1.65810010671509,0.579606171470105,1.03800594213442,0,1.04535523804977,0.453237370790265,0.383220493601921,1.71813722741315,1.51811815211702,1.27426165729639,1.30216690771284,2.85135613334512,3.16207750063323,2.17577238962511,1.24930726552346,2.60454977248419,3.28451198768419,1.20964045934839,0.802320587350522,0.724122019413995,0,0.670700859703636,0.383587685530591,0.722878304769133,1.00267582127178,0.724232594804119,3.1811437882044,0.973269740605272,0.378139268656271,0.221729397462564,0.43917392846563,0.130979075497713,0,0,1.9472843619281,0.696518949197069,0.930705723632056,2.62339686735876,4.0039643754609,2.22874500797739,0.39752481473341,0,0,0,0.419499436209906,0,0.417989933073621,0,0.35576626268671,0.66944122552934,0,0.760272105718513,0,0,0,0.267899184852239,0,0.225222960966644,0,0,0,6.58902087180316,15.511210565933,0,1.98788780678127,1.39293562831038,1.05927344650575,0.286836620748814,0.709336764396714,0,0,0,0.311211035399766,0.67355336034844,0.163461903113459,1.21085942115945,0,0.234321431833797,1.5608003841516,1.1409436430889,0.597794722207204,0.587172493218824,0.485618833104395,0.702254033511242,1.22492502752936,0.982674538494144,0.619954687054593,2.37600571456411,0.741800787835671,0,0,1.34668891163253,0.500474079487857,0.831192346452549,1.31693286264251,2.45190236639216,0.901428353439581,0.794025282120147,0,1.06778694409284,1.48352330811693,1.50045548042201,1.44273540933814,0.257640540045629,1.30281799432113,0.843881661206331,1.46155507741798,0.252433774244115,1.01254888506529,0.80823028409406,0.710019185033229,1.81353776809752,2.03472710772585,0.773043412653187,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0.643240938192885,0,0,2.16563844500876,0.236613600079688,0.674338760312407,0,0.330881918197182,0.653638332277218,0.474541238222193,0.404493924480493,0.196221465125346,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,1.3725424823882,0,0,0.100528972411631,0.0925884451585296,0.977424915930974,0,0,0,0.587043471179108,0.144366447761074,0,0.380508304469197,0,0,2.95460407304877,2.80805118167085,1.63494278517601,1.87467667973554,1.84780341018745,0.708875486211932,0.358234090811393,0,0,0,2.3773077183571,2.48793738648926,2.45003920808834,2.39860623510122,0.571481048629521,0.381988425558278,0,0,0.616964956219941,0.600686115687835,0.857479297891735,0.560655421726804,0,1.0267360014933,2.84397774667111,0,0,1.86156681609409,0,1.80045161983499,0,0.266422179016099,1.14382394926518,0,0,0.977208552881205,1.06617584622764,0.791951872933429,1.50719688529793,6.97226766880235,0.99972991182057,1.2162378064119,0.502257091432126,2.10833939483032,1.91699884393266,0,0,2.60606352001643,0.821905290201534,0.895304816199478,0.336255431980582,1.18218456121156,0.862510299438069,2.05348858047597,0.254094624222463,1.30139853857622,0,1.50764638800914,0,8.23907726341901,11.966458368161,27.3514238867783,1.2269149171914,0,0.813795071099207,1.45579603071565,0.713715955188647,1.10391690523754,0.937131319941706,2.10662269809403,0,0,0.664225598535437,0.368738337083406,1.73767228936166,0.391602314925481,0.343143423810856,1.86091223510599,2.15714200818617,0.853820462427555,0,1.66435439510497,0.30239029332968,2.23297027036899,0.920771839728375,1.68396056659844,2.81906128362542,3.07024349440022,1.286831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| |||
|short_description=p2@GLRX | |||
}} |
Revision as of 06:34, 22 January 2014
Short description: | p2@GLRX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GLRX_5end |
Coexpression cluster: | C246_Neutrophils_Eosinophils_Whole_CD14_CD14CD16_Basophils_migratory |
Association with transcript: | 0bp_to_ENST00000507605_5end |
EntrezGene: | GLRX |
HGNC: | 4330 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.06e-38 | 72 |
leukocyte | 1.27e-33 | 136 |
defensive cell | 3.46e-33 | 48 |
phagocyte | 3.46e-33 | 48 |
granulocyte monocyte progenitor cell | 2.31e-32 | 67 |
classical monocyte | 7.76e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.76e-32 | 42 |
macrophage dendritic cell progenitor | 1.48e-31 | 61 |
myeloid lineage restricted progenitor cell | 6.37e-30 | 66 |
monopoietic cell | 6.39e-30 | 59 |
monocyte | 6.39e-30 | 59 |
monoblast | 6.39e-30 | 59 |
promonocyte | 6.39e-30 | 59 |
hematopoietic lineage restricted progenitor cell | 2.55e-27 | 120 |
hematopoietic stem cell | 1.19e-25 | 168 |
nongranular leukocyte | 3.52e-25 | 115 |
hematopoietic cell | 1.89e-24 | 177 |
myeloid cell | 3.37e-24 | 108 |
common myeloid progenitor | 3.37e-24 | 108 |
hematopoietic oligopotent progenitor cell | 6.80e-24 | 161 |
hematopoietic multipotent progenitor cell | 6.80e-24 | 161 |
mesenchymal cell | 3.00e-17 | 354 |
connective tissue cell | 2.12e-16 | 361 |
multi fate stem cell | 3.74e-14 | 427 |
motile cell | 8.71e-14 | 386 |
stem cell | 1.52e-13 | 441 |
somatic stem cell | 2.86e-13 | 433 |
granulocyte | 1.06e-08 | 8 |
blood cell | 5.77e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.43e-39 | 98 |
blood island | 1.43e-39 | 98 |
bone marrow | 1.02e-33 | 76 |
hemolymphoid system | 6.57e-33 | 108 |
bone element | 2.47e-29 | 82 |
skeletal element | 2.13e-27 | 90 |
immune system | 1.86e-25 | 93 |
skeletal system | 1.04e-24 | 100 |
connective tissue | 3.89e-16 | 371 |
lateral plate mesoderm | 4.01e-16 | 203 |
musculoskeletal system | 8.81e-15 | 167 |
mesoderm | 7.14e-09 | 315 |
mesoderm-derived structure | 7.14e-09 | 315 |
presumptive mesoderm | 7.14e-09 | 315 |
blood | 1.48e-08 | 15 |
haemolymphatic fluid | 1.48e-08 | 15 |
organism substance | 1.48e-08 | 15 |