FFCP PHASE1:Hg19::chr6:86159765..86159820,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4907 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8021 | |||
|TSSclassifier=strong | |||
|UniProt=P21589,Q96B60 | |||
|association_with_transcript=0bp_to_ENST00000257770,ENST00000369646_5end | |||
|coexpression_cluster_id=C2870 | |||
|description=CAGE_peak_1_at_NT5E_5end | |||
|id=chr6:86159765..86159820,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.70e-30!180;CL:0000220!4.44e-22!246;CL:0002321!3.26e-21!248;CL:0000222!9.04e-20!119;CL:0000057!1.27e-17!75;CL:0000680!4.19e-16!57;CL:0000056!4.19e-16!57;CL:0000355!4.19e-16!57;CL:0000192!1.06e-14!42;CL:0000514!1.06e-14!42;CL:0000359!1.27e-14!32;CL:0000187!1.87e-14!54;CL:0000183!5.47e-14!59;CL:0002371!1.41e-11!591;CL:0000393!2.44e-11!60;CL:0000211!2.44e-11!60;CL:0000548!1.50e-10!679;CL:0000004!1.50e-10!679;CL:0000255!1.50e-10!679;CL:0000012!6.66e-10!682;CL:0000144!1.12e-09!625;CL:0002620!1.38e-08!23;CL:0000499!1.59e-07!27;CL:0000066!1.80e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.30e-14;32!CL:0000192;9.47e-11;43!CL:0002620;1.23e-08;23!CL:0000499;4.78e-08;28!CL:0000187;7.17e-08;55!CL:0000134;1.51e-07;55!CL:0000057;1.80e-07;73!CL:0002320;4.09e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.27e-21,250;CL:0000222,5.80e-20,121;CL:0000057,2.34e-18,76;CL:0000680,4.27e-16,58;CL:0000056,4.27e-16,58;CL:0000355,4.27e-16,58;CL:0000359,1.06e-14,32;CL:0000192,1.21e-14,43;CL:0000514,1.21e-14,43;CL:0000187,1.91e-14,55;CL:0000393,3.99e-11,61;CL:0000211,3.99e-11,61;CL:0002620,1.25e-08,23;CL:0000499,4.83e-08,28;CL:0000066,2.29e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000514;9.47e-11;43!CL:0000355;1.77e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!8.06e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;8.03e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.49e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.79e-24!83;UBERON:0002329!4.79e-24!83;UBERON:0003077!4.79e-24!83;UBERON:0003059!4.79e-24!83;UBERON:0007282!4.79e-24!83;UBERON:0009618!4.79e-24!83;UBERON:0007285!4.79e-24!83;UBERON:0005256!9.49e-23!143;UBERON:0000486!1.68e-21!82;UBERON:0002049!3.50e-19!79;UBERON:0007798!3.50e-19!79;UBERON:0004290!5.69e-19!70;UBERON:0000475!1.59e-17!365;UBERON:0002100!3.09e-17!216;UBERON:0000055!3.65e-16!69;UBERON:0000119!5.03e-16!312;UBERON:0001981!2.22e-15!60;UBERON:0007500!2.22e-15!60;UBERON:0004537!2.22e-15!60;UBERON:0006965!2.22e-15!60;UBERON:0003914!2.70e-15!118;UBERON:0001637!3.17e-15!42;UBERON:0003509!3.17e-15!42;UBERON:0004572!3.17e-15!42;UBERON:0000483!3.53e-15!309;UBERON:0000490!7.26e-15!138;UBERON:0001134!8.45e-15!61;UBERON:0002036!8.45e-15!61;UBERON:0003082!8.45e-15!61;UBERON:0002385!1.78e-14!63;UBERON:0001015!1.78e-14!63;UBERON:0000383!1.78e-14!63;UBERON:0000481!3.22e-14!347;UBERON:0004872!5.37e-14!84;UBERON:0004573!5.97e-13!33;UBERON:0004571!5.97e-13!33;UBERON:0004535!7.42e-13!110;UBERON:0003102!8.47e-13!95;UBERON:0003104!8.95e-13!238;UBERON:0009142!8.95e-13!238;UBERON:0000477!2.35e-12!286;UBERON:0000467!3.67e-12!625;UBERON:0000480!5.45e-12!626;UBERON:0001009!5.71e-12!113;UBERON:0000468!1.59e-11!659;UBERON:0004111!2.84e-09!241;UBERON:0002199!1.26e-08!45;UBERON:0002416!1.26e-08!45;UBERON:0002097!9.08e-08!40;UBERON:0000923!3.30e-07!604;UBERON:0005291!3.30e-07!604;UBERON:0006598!3.30e-07!604;UBERON:0002532!3.30e-07!604;UBERON:0002050!3.44e-07!605;UBERON:0005423!3.44e-07!605;UBERON:0000947!3.45e-07!21;UBERON:0010191!3.45e-07!21;UBERON:0000926!9.42e-07!448;UBERON:0004120!9.42e-07!448;UBERON:0006603!9.42e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;6.20e-12;33!UBERON:0004571;6.20e-12;33!UBERON:0001637;5.73e-11;42!UBERON:0003509;5.73e-11;42!UBERON:0004572;5.73e-11;42!UBERON:0007500;9.67e-09;56!UBERON:0001981;9.67e-09;56!UBERON:0004537;9.67e-09;56!UBERON:0002049;1.28e-08;75!UBERON:0007798;1.28e-08;75!UBERON:0000055;1.95e-08;65!UBERON:0003914;1.26e-07;74!UBERON:0000075;1.99e-07;16!UBERON:0000947;3.21e-07;21!UBERON:0010191;3.21e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,1.53e-21,83;UBERON:0002329,5.47e-19,71;UBERON:0003059,5.47e-19,71;UBERON:0007282,5.47e-19,71;UBERON:0004290,5.47e-19,71;UBERON:0009618,5.47e-19,71;UBERON:0002049,7.50e-19,78;UBERON:0007798,7.50e-19,78;UBERON:0007524,8.11e-19,73;UBERON:0000490,1.16e-18,148;UBERON:0003077,1.17e-18,72;UBERON:0007285,1.17e-18,72;UBERON:0007503,1.17e-18,78;UBERON:0000119,1.01e-16,309;UBERON:0005256,1.36e-16,122;UBERON:0000483,7.43e-16,306;UBERON:0000055,7.91e-16,68;UBERON:0003914,2.23e-15,117;UBERON:0001637,2.62e-15,42;UBERON:0003509,2.62e-15,42;UBERON:0004572,2.62e-15,42;UBERON:0003104,4.28e-15,160;UBERON:0009142,4.28e-15,160;UBERON:0007500,4.92e-15,59;UBERON:0001981,4.92e-15,59;UBERON:0004537,4.92e-15,59;UBERON:0006965,4.92e-15,59;UBERON:0001134,8.27e-15,62;UBERON:0002036,8.27e-15,62;UBERON:0003082,8.27e-15,62;UBERON:0002385,1.72e-14,64;UBERON:0001015,1.72e-14,64;UBERON:0000383,1.72e-14,64;UBERON:0003102,2.22e-14,99;UBERON:0004872,1.14e-13,83;UBERON:0002100,2.60e-13,199;UBERON:0004573,5.10e-13,33;UBERON:0004571,5.10e-13,33;UBERON:0004535,1.63e-12,109;UBERON:0001009,1.22e-11,112;UBERON:0004111,2.60e-09,240;UBERON:0002199,5.12e-09,46;UBERON:0002416,5.12e-09,46;UBERON:0002097,3.76e-08,41;UBERON:0000075,1.95e-07,16;UBERON:0004923,3.17e-07,66;UBERON:0000947,3.19e-07,21;UBERON:0010191,3.19e-07,21 | |||
|phase1_expression=44.1478461627453,42.3919037304147,30.0232880724419,59.0432460283469,17.4314826826642,88.9785294582376,27.8629865985142,116.236456710537,65.0352214217598,22.8532560946403,17.4450291993107,117.084575461772,140.324032417537,197.407332971274,243.908468535746,186.906390713594,212.751168392464,197.914034494978,203.467977095641,79.7824456337586,66.3002246543822,35.733838248502,32.6309025329405,108.952042358016,27.368295431667,8.32906122652669,6.73224833489555,6.21815172378066,0,0,0.928896739896456,102.97517714164,171.386167784824,179.700448941059,0,0,0,2.21598163412751,0.200544447470142,0.217010870715852,0.223915474239924,1.29557466407592,0.257575567634187,0,0.377875943688809,0.242584061187816,2.78914844286822,4.93401465626191,7.74265927237759,0.863077176966451,1.0246428261164,3.78371567821736,4.48169384957604,4.51839278508678,0,3.20011977222428,1.91034305040492,4.94391665779186,7.95818120164347,7.70229664982625,7.03270838378945,0,0.199463657621632,0.426224750532694,0.870627715885752,1.13477044938228,0.622822248995575,2.26123798731069,3.65038042894141,2.17188844705117,4.23779651843358,1.10483290796269,1.58231193720442,0,0,0.209658645508376,0.112328631146495,0,0,0,0,0.182664153764634,47.5189860045571,54.6138611262131,69.3817218013573,51.2076267079809,62.4617739776179,65.5217781548111,62.7992629145619,61.0594402902633,52.3675931580693,45.2172635815623,34.4045905312706,1.32171328579026,0.560508562981536,0.526768169550154,0.983548850569165,0.786021525498329,0.411202997999018,0,0.651844533267181,1.4203434172042,0,3.56513462032555,2.3568472597987,1.10766947291811,0.812411591295047,0.25618263945135,0.780356085359269,3.4531959966772,5.80335037350282,3.18783394308558,0.14828656316206,0.802622484269139,1.04535523804977,3.51258962362455,0,1.37450978193052,1.51811815211702,3.50421955756506,8.46408490013344,4.75226022224187,5.42070428679982,7.42322344695627,9.99445812418767,2.8413270245282,4.92676798152628,4.83856183739358,1.87208137048455,3.47578569318718,12.1903433156981,31.5229404060709,15.0877822975366,327.463872060417,199.031150522448,320.11080690342,427.06855356644,344.537488174266,147.663384410274,136.807038234402,74.571733053464,18.0751124186843,40.8010722887647,28.1796176516166,0.324547393654683,0,0.26591592103773,0.238490624305342,0,0,81.8901118350825,97.2065092469921,93.3807949324429,53.1389465408569,64.1834137401156,45.6695949620512,93.2117550754175,81.6596958975079,104.595281229893,95.7300952506957,206.651439676992,115.561360069214,180.605922585645,101.842673255806,80.2040528402942,112.339058181372,62.8682243353275,53.7156761905447,44.4618248651061,54.1081425953833,41.5867958722025,0,0,34.4514301192602,124.739959875525,163.986512605631,217.415874895305,478.156646788272,214.219702847808,82.9802848210615,56.5769677367436,111.493731884556,77.180336779142,106.556141607123,107.557932248656,110.4909221808,124.45399968768,76.3887867778177,440.457868407582,230.470615903958,471.660035821484,284.191486717911,267.414104096153,265.030672247143,348.899478674613,393.315484032281,297.164946661501,408.672982905026,385.241875815992,96.4771043654308,56.7708332034828,318.491927601093,371.602004019734,437.484238349525,261.191684424099,320.279746609976,453.268223721203,88.5905350479764,311.061628284487,99.0906284118153,126.947208794578,480.745935927212,152.414690743651,161.540618608609,157.827094169188,329.957729531675,98.8985602386166,130.255827509963,116.627221579793,236.003242955465,341.519228000983,146.493550822989,106.823173155607,229.20737185167,234.561663708118,194.740320269134,0.731842236777572,0.132529768321485,1.51052125730374,1.24393266018445,0.252320850875628,0.36497735907583,352.011447742086,310.685373147164,305.278176188982,155.563255890713,173.251075600701,17.1544860057774,20.3987474994503,21.4499816596299,20.0735030372957,24.1846182942571,22.066167577332,19.685370991384,21.9768040940388,23.8543237306762,96.6983645558289,70.1208869017229,11.1124983059478,10.2906097969879,63.3775174109154,36.3646070170722,73.8487383351755,0,5.65746817298322,362.865918781382,91.3122374599765,149.494331832634,163.057993251665,115.180025777211,106.539315836476,85.2746523929254,193.403998313866,236.729886959107,60.4654775314482,208.032051223707,188.898089131257,172.94102438125,17.3844967551041,21.4621540523718,0,0,0.148631162288728,199.653066391835,368.888753524696,408.879380447043,368.085528308707,299.643590607895,210.093708182536,17.735876564254,2.72950145441001,1.4512968087854,0.144119953416961,0.50496973370552,19.6843472305724,78.6896156650052,32.8208852188132,59.8753561079468,55.4240185670914,123.140653716006,14.0054951988983,232.896262185314,109.861937345987,442.156525214508,210.325081537904,64.3781602533388,173.28706427398,119.406214346607,246.497625479938,78.1910417756912,104.968357697226,147.864309353935,17.3003372326359,9.76718889704597,31.2831327976692,174.594594781442,12.0833262572466,121.960588431748,93.7476462655313,128.986951872844,71.5806616863528,0,0,0,174.926144508855,27.5668646001873,651.850656036083,416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| |||
|short_description=p1@NT5E | |||
}} |
Revision as of 12:53, 22 January 2014
Short description: | p1@NT5E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NT5E_5end |
Coexpression cluster: | C2870_Smooth_leiomyoma_giant_Synoviocyte_Urothelial_Myoblast_mesenchymal |
Association with transcript: | 0bp_to_ENST00000257770, ENST00000369646_5end |
EntrezGene: | NT5E |
HGNC: | 8021 |
UniProt: | P21589Q96B60 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.27e-21 | 250 |
mesodermal cell | 5.80e-20 | 121 |
fibroblast | 2.34e-18 | 76 |
muscle precursor cell | 4.27e-16 | 58 |
myoblast | 4.27e-16 | 58 |
multi-potent skeletal muscle stem cell | 4.27e-16 | 58 |
vascular associated smooth muscle cell | 1.06e-14 | 32 |
smooth muscle cell | 1.21e-14 | 43 |
smooth muscle myoblast | 1.21e-14 | 43 |
muscle cell | 1.91e-14 | 55 |
electrically responsive cell | 3.99e-11 | 61 |
electrically active cell | 3.99e-11 | 61 |
skin fibroblast | 1.25e-08 | 23 |
stromal cell | 4.83e-08 | 28 |
epithelial cell | 2.29e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.49e-07 | 14 |