FFCP PHASE1:Hg19::chr7:100200018..100200030,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5118 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8738 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000496269_5end | |||
|coexpression_cluster_id=C1641 | |||
|description=CAGE_peak_2_at_PCOLCE_5end | |||
|id=chr7:100200018..100200030,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.55e-47!180;CL:0000057!1.29e-29!75;CL:0000680!1.33e-16!57;CL:0000056!1.33e-16!57;CL:0000355!1.33e-16!57;CL:0000187!4.74e-16!54;CL:0000183!1.07e-15!59;CL:0000393!1.93e-14!60;CL:0000211!1.93e-14!60;CL:0002620!2.47e-13!23;CL:0000192!7.93e-12!42;CL:0000514!7.93e-12!42;CL:0000048!2.32e-08!430;CL:0000359!3.66e-08!32;CL:0000723!1.76e-07!436;CL:0000034!2.48e-07!444;CL:0000499!8.14e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002620;6.78e-15;23!CL:0000057;4.76e-13;73!CL:0000187;1.78e-09;55!CL:0002320;6.42e-09;188!CL:0000192;1.07e-08;43!CL:0000393;6.63e-08;61!CL:0000211;6.63e-08;61!CL:0000134;1.60e-07;55!CL:0000723;2.30e-07;61!CL:0000499;2.34e-07;28!CL:0000359;5.01e-07;32!CL:0000327;5.74e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.81e-33,76;CL:0000680,3.28e-17,58;CL:0000056,3.28e-17,58;CL:0000355,3.28e-17,58;CL:0000187,1.42e-16,55;CL:0002620,7.26e-15,23;CL:0000393,9.52e-14,61;CL:0000211,9.52e-14,61;CL:0000048,1.30e-12,427;CL:0000192,6.90e-12,43;CL:0000514,6.90e-12,43;CL:0000723,1.13e-11,433;CL:0000034,9.56e-11,441;CL:0000499,2.33e-07,28;CL:0000359,2.57e-07,32;CL:0000327,5.79e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000355;1.62e-09;58!CL:0000514;1.07e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.00e-24!83;UBERON:0002329!6.00e-24!83;UBERON:0003077!6.00e-24!83;UBERON:0003059!6.00e-24!83;UBERON:0007282!6.00e-24!83;UBERON:0009618!6.00e-24!83;UBERON:0007285!6.00e-24!83;UBERON:0004290!4.01e-21!70;UBERON:0002385!4.80e-17!63;UBERON:0001015!4.80e-17!63;UBERON:0000383!4.80e-17!63;UBERON:0001134!5.23e-17!61;UBERON:0002036!5.23e-17!61;UBERON:0003082!5.23e-17!61;UBERON:0000486!9.60e-17!82;UBERON:0003102!2.83e-13!95;UBERON:0005256!3.66e-13!143;UBERON:0000475!2.50e-12!365;UBERON:0002199!4.35e-12!45;UBERON:0002416!4.35e-12!45;UBERON:0002097!8.99e-10!40;UBERON:0000468!5.90e-09!659;UBERON:0000481!9.76e-09!347;UBERON:0000479!3.30e-08!787;UBERON:0002100!5.49e-08!216;UBERON:0001013!2.40e-07!14;UBERON:0004872!4.71e-07!84;UBERON:0003104!7.74e-07!238;UBERON:0009142!7.74e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;4.29e-10;198!UBERON:0002385;9.43e-10;31!UBERON:0001015;9.43e-10;31!UBERON:0000383;9.43e-10;31!UBERON:0002199;1.54e-09;46!UBERON:0002416;1.54e-09;46!UBERON:0002204;1.77e-09;70!UBERON:0002097;6.95e-09;41!UBERON:0003102;1.59e-08;50!UBERON:0001013;4.68e-08;14!UBERON:0001434;4.78e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.74e-22,73;UBERON:0002329,2.24e-22,71;UBERON:0003059,2.24e-22,71;UBERON:0007282,2.24e-22,71;UBERON:0004290,2.24e-22,71;UBERON:0009618,2.24e-22,71;UBERON:0003077,1.01e-21,72;UBERON:0007285,1.01e-21,72;UBERON:0000486,1.54e-18,83;UBERON:0007503,3.26e-18,78;UBERON:0002385,7.26e-18,64;UBERON:0001015,7.26e-18,64;UBERON:0000383,7.26e-18,64;UBERON:0001134,8.39e-18,62;UBERON:0002036,8.39e-18,62;UBERON:0003082,8.39e-18,62;UBERON:0003104,7.16e-15,160;UBERON:0009142,7.16e-15,160;UBERON:0002199,1.74e-14,46;UBERON:0002416,1.74e-14,46;UBERON:0003102,2.20e-14,99;UBERON:0005256,1.40e-13,122;UBERON:0002097,8.04e-12,41;UBERON:0000479,1.20e-09,773;UBERON:0001013,4.21e-08,14;UBERON:0000490,1.96e-07,148;UBERON:0000948,3.87e-07,24;UBERON:0005498,3.87e-07,24;UBERON:0004140,3.87e-07,24;UBERON:0009881,3.87e-07,24;UBERON:0004141,3.87e-07,24;UBERON:0003084,3.87e-07,24;UBERON:0007005,3.87e-07,24;UBERON:0004139,3.87e-07,24;UBERON:0004291,3.87e-07,24;UBERON:0002384,4.91e-07,371;UBERON:0004872,6.98e-07,83 | |||
|phase1_expression=2.36181893051724,6.85121676451146,2.11431606143957,5.00366491765652,0,2.61701557230111,7.59899634504932,23.3736353167927,29.7751616147816,0.982935746006035,0,0,0.263766978228454,65.1011016569845,22.8664189252262,17.4804538077462,9.64311244838363,18.9880623500717,19.0293791528298,0.246242116153576,3.4680117511523,4.07491137921514,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,10.7312137552582,7.28816602508123,14.4575660953827,22.560205978615,29.6935363869689,27.0397221997374,29.6847270884608,0.472674085820339,0.443458794925128,0.527008714158756,2.42311289670768,0,0,0,0,0,0,0,0,0,2.58070378531837,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,16.8970463576408,20.6407734013265,5.03154887090231,79.4537439474214,33.3388279266456,10.6528744027038,1.06748995729705,4.68668341992604,17.1166069469871,2.42479209725439,3.43269996538263,14.0762407709786,53.0081850521599,52.7223221626042,58.9982545209306,12.5503800739779,64.5618299983781,12.6829258535266,12.302343771978,13.2023758300114,36.1352883121161,31.9369225010597,72.1213952606843,93.8522257252822,93.714166196573,5.46096817162816,20.8399261126709,24.0720642954315,36.2843707628696,10.8055005038831,54.4332249892239,45.9731693698529,46.573798261045,2.04177929688038,26.7290557176404,79.8704634181442,62.7318427432303,50.715395238264,34.3164922364002,22.6723675240154,36.29278698466,66.6666512353002,19.6822750425621,24.233642327435,89.7486511762419,67.4064056934446,43.3111702870269,7.45565526884538,21.0255134465005,0,0,0,0.975789649036763,0.132529768321485,1.85910308591229,0.932949495138334,0.756962552626885,0.72995471815166,17.2094485562798,77.8321535213391,12.4321429217232,67.333349564637,98.8974889887332,0,0,0,0,0,0,0,0,0,0,1.40241773803446,9.0546282492908,33.8120036186747,0,0,2.36315962672562,0,0.614942192715568,8.0636870840307,0,0,0,0,39.4228049425493,32.2379783436669,0,0.231860809950154,7.27933904262094,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.414656231081544,0.144119953416961,0.25248486685276,0.825472625798197,0,0,5.13217338068116,2.05654985406647,0,0,6.95212722941236,8.7192013766656,15.2543634507576,5.30014034606889,364.80957476892,25.35908257668,22.3388017931291,13.5209667984776,25.4635300519521,7.09245660116391,15.4524863829338,3.28849385413739,93.3309161273282,17.2880470723961,10.7492940816933,3.55391948742546,12.6712299669349,0,0,0,0,0,0,1.4377491329495,11.4861935834114,9.98458335285029,3.61953266668948,11.3011977402711,2.86497541183833,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0.637938751653163,0,0,0,88.4605655294999,105.035809422532,16.0046363982844,26.6202702759433,43.1798152889131,26.0208984805992,21.5540203586592,15.9501432855691,36.3852006489576,58.9796506367278,22.5836703502048,18.9900243597954,57.4300691634028,35.0484071858306,38.4320634668159,0,0,0,0,6.65741758041988,2.41912234663744,3.2254015016441,5.67809301165831,10.9457436828899,1.79394808957981,6.14048698880044,2.2519548960105,2.96836132889982,45.1834402841781,64.8100297392914,42.8703754392084,43.0981176222406,21.4989200150925,0.120859449591622,0,0,13.7777337797528,31.3196808971553,28.453998046195,0,0,0,0,0,0,0,0,0,0.541892875087706,0,0,0,0,0,0,0,0,0.976135183992909,2.7821073144885,8.14968236883256,6.68326949356763,0.574265537996172,3.25030123018261,14.4615536859744,18.0774243206268,7.85647947284686,8.289198435211,4.9621166094431,33.7299568886379,32.0486893550445,17.727138502549,21.6347846621572,0,0,0,0,0.464845549297286,40.6107927411526,13.2437081330514,11.7052760466914,4.25844824253617,7.82939692867565,15.9378828429371,0.143124886741991,11.16475108079,7.90948561796815,2.47819252100972,23.7984945919541,47.9291666597991,48.3668936847424,4.70969184119538,8.45400550641579,6.86342574340137,7.53999375012393,7.27856933663938,4.75530963519025,2.94880919367287,6.82687234725426,12.4293879711955,3.16950440270266,11.4659925582708,15.5545975149084,41.8130031494898,15.4382296192915,0.66343897524122,0,20.8359192336008,96.416528550855,1.82619339266434,5.5768229657955,12.3946065114186,6.45351084918232,9.23540985523339,0.7133421029625,31.2189736382126,42.2215270595328,26.672886329752,69.8230639728916,143.123300580198,0,1.34060455107157,0,2.7301702225266,0,0,0,0,0,0,0,0,0,0,0,0,5.5548516986286,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10222901961303,0,0,0,0,0,0,0.994147647766298,0,0,0,0,7.77067154179172,3.03912307084262,0.251932747854276,0,0,5.28767299025073,0,0,0,4.93217028184668,0,4.44547960578548,0,0.834912883456661,0,0,0,7.24999575434793,0,0,0,1.37897349296586,0.291604613383254,1.56262495439963,0,0,0,0.110579259931225,0,2.19385397153973,0.980446171670911,0,26.7786899593214,0.113942055847001,0,0,0,0.638002319463839,14.1060293838868,0.533034776018635,0,0,0,0.451191321234361,0.19606253431774,0.671286347903371,0,0,0,0,0,0,2.98578579323551,2.21143911258348,3.66618086960175,0,0,0,0.202203398942031,32.1031058919516,0,0,0,0,4.3404284313433,10.8891644443797,3.67287313956588,18.0713617737476,0,0,0,0,0,0,0.284609546029793,0,0,0,0,12.2308667769421,4.1276647793188,0,0,0,2.32773639572207,0,40.6765333404958,0.137041924646751,0,0.189932387867636,0,0,6.40358984218058,0,0,0,0,0,0,0,6.38749768545986,5.54395085455366,3.05994652908965,20.8044424729094,0,0.136905378891993,0,0,0,18.1533560826965,3.20824593616357,3.58936512288407,0.998395002494955,1.28767814440971,1.11585728720936,4.90439349153102,6.12509802022086,0,0.236349546921671,0.576911008668165,0.202210631562555,0,0,0,0,0.643012593860077,1.2378549293751,0,0,0,0.0607495566580247,0,1.41850273138557,4.56354916774483,0,0,0,12.8645158747206,0,1.5256112259285,0,0,0,0,0,11.0752214160524,9.06496732161006,4.25001477666439,0,0.387848869084652,0,0,0,4.27149650270779,1.72924735609633,5.38510771951354,3.96932817449561,0,0,0,2.72008901684737,0.7520696820681,0.919036730290385,1.31149052283922,0,0,0.244052529803926,0,0,0.554645257684261,0.558867626472451,0,0,0,2.28372266835974,0,0,0,24.0300232647867,45.1066688005143,18.8633992910889,31.0620928651146,35.2195062453605,41.8211274150372,15.5611246509908,23.2895622595388,21.916645282172,8.7234538493884,5.41609008356588,4.04822800947244,10.4026181107094,24.4676662626105,3.72178400381193,14.0871166689168,0.601030435988874,0,1.22061219961398,14.7297413954073,2.57785336901972,15.3131140759903,6.76763010787647,0,78.9810121920424,88.5651155454367,0,1.73357847366573,0,0.260994291965212,0,0,0,0,0.308801447160972,0,0.353378291891762,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,1.13503190713367,99.6013190862458,0,0,9.46418347647022,0.646948868380091,0.314531883711793,32.3260529048361,28.1755999723682,11.6916206055926,0,6.14509409770568,17.1722349352846,0,0,227.828659624182,6.4311550244172,0.385375350578757,0,0.159633859057151,0.82046545696302,1.76450187355203,0.484100767249525,0.322951291263702,2.85538840518309,0,0,0,0,1.52552838186867,2.7614397042404,36.6005848693945,6.6937192230839,0.60511520611056,2.34454203369928,0,0,0,0.270150338473579,0,0.206686796501184,0.126831620387814,1.09394961803644,1.64477330057155,8.9318012110073,2.28632617667507,0.127762427639595,1.07140367175657,0,2.42786241694653,0.682986574053893,2.57236873471653,0,0,0.203909198930495,0,0,0,7.14287144939678,0,0.280272163313789,24.6552854537564,0,0,12.9372544959748,0,0,21.0368509486121,20.8444954829866,0,0.3414369541879,0,0.430227358820278,5.56160403433657,4.00503002368041,2.54032230114557,0,0.31020638566432,0,0,0,0,0,1.53994210284371,35.9542473714842,69.4566720074569,0,0,0.118920090777569,0.11294608203896,0,0,1.08043821351123,5.90110813360685,0,2.20633489578515,0,1.57046773691956,0.297046400327086,15.2156061930024,11.2151895693959,0.375935671919414,1.61144719933943,0,0,0,0,6.57302749421866,0.917458566809082,0.430018749454354,5.67977623895465,0.135982980381829,1.74540276136151,5.81929524566941,97.8346897778556,103.989516442069,57.5393327624639,0.756998549010474,0,5.8281310465261,0,0,0,0,5.30450887527676,1.07185652062471,0,0.20686599172379,8.9558272398412,15.7122524766069,0.452122368852043,1.05527014302958,0,2.86412212251742,5.65928129083014,3.26575121845442,13.0048654412407,3.43495470374396,4.15988791277523,40.2519031420676,0,0,54.0602390403432,0,21.1176848163109,4.03396765803459,31.3310057303119,1.33151354837103,6.64203518850387,0 | |||
|short_description=p2@PCOLCE | |||
}} |
Revision as of 18:19, 22 January 2014
Short description: | p2@PCOLCE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PCOLCE_5end |
Coexpression cluster: | C1641_Mesenchymal_Nucleus_Fibroblast_tenocyte_Pericytes_normal_Smooth |
Association with transcript: | 0bp_to_ENST00000496269_5end |
EntrezGene: | PCOLCE |
HGNC: | 8738 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.81e-33 | 76 |
muscle precursor cell | 3.28e-17 | 58 |
myoblast | 3.28e-17 | 58 |
multi-potent skeletal muscle stem cell | 3.28e-17 | 58 |
muscle cell | 1.42e-16 | 55 |
skin fibroblast | 7.26e-15 | 23 |
electrically responsive cell | 9.52e-14 | 61 |
electrically active cell | 9.52e-14 | 61 |
multi fate stem cell | 1.30e-12 | 427 |
smooth muscle cell | 6.90e-12 | 43 |
smooth muscle myoblast | 6.90e-12 | 43 |
somatic stem cell | 1.13e-11 | 433 |
stem cell | 9.56e-11 | 441 |
stromal cell | 2.33e-07 | 28 |
vascular associated smooth muscle cell | 2.57e-07 | 32 |
extracellular matrix secreting cell | 5.79e-07 | 15 |