FFCP PHASE1:Mm9::chr10:112366005..112366029,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=382423|HGNC=|UniProt=|association_with_transcript=27bp_to_ENSMUST00000165438_5end|description=CAGE_peak_2_at_Atxn7l3b_5end|id=chr10:112366005..112366029,-|ontology_enrichment_celltype=CL:0000117!2.31e-08!23;CL:0000337!2.31e-08!23;CL:0002321!1.69e-07!70;CL:0000220!1.69e-07!70|ontology_enrichment_celltype_v019_2=CL:0000117,2.31e-08,23;CL:0000337,2.31e-08,23;CL:0002321,1.69e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.46e-09!34;UBERON:0001049!3.63e-09!52;UBERON:0005068!3.63e-09!52;UBERON:0006241!3.63e-09!52;UBERON:0007135!3.63e-09!52;UBERON:0003056!5.10e-09!49;UBERON:0001017!1.41e-08!73;UBERON:0005743!1.41e-08!73;UBERON:0002780!1.80e-08!39;UBERON:0001890!1.80e-08!39;UBERON:0006240!1.80e-08!39;UBERON:0002346!1.81e-08!71;UBERON:0003075!1.81e-08!71;UBERON:0007284!1.81e-08!71;UBERON:0003080!1.93e-08!40;UBERON:0000073!6.74e-08!75;UBERON:0001016!6.74e-08!75;UBERON:0002791!3.55e-07!29;UBERON:0003528!3.55e-07!29;UBERON:0001893!3.55e-07!29;UBERON:0002616!4.26e-07!49;UBERON:0000955!6.89e-07!50;UBERON:0006238!6.89e-07!50|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.14e-09,64;UBERON:0003075,1.14e-09,64;UBERON:0007284,1.14e-09,64;UBERON:0002020,1.46e-09,34;UBERON:0000073,3.21e-09,54;UBERON:0001049,3.63e-09,52;UBERON:0005068,3.63e-09,52;UBERON:0006241,3.63e-09,52;UBERON:0007135,3.63e-09,52;UBERON:0003056,5.10e-09,49;UBERON:0001017,1.41e-08,73;UBERON:0002780,1.80e-08,39;UBERON:0001890,1.80e-08,39;UBERON:0006240,1.80e-08,39;UBERON:0003080,1.93e-08,40;UBERON:0001016,6.74e-08,75;UBERON:0010371,1.35e-07,73;UBERON:0011216,2.07e-07,194;UBERON:0002616,2.59e-07,46;UBERON:0003528,3.55e-07,29;UBERON:0002791,3.55e-07,29;UBERON:0001893,3.55e-07,29;UBERON:0000955,4.34e-07,47;UBERON:0006238,4.34e-07,47;UBERON:0000160,5.10e-07,31|phase1_expression=10.4096750618116,67.3522536743967,53.2349110085757,48.6967380203996,57.6030089438299,14.6054966563344,17.0537227634734,2.7115897922731,5.06839399746,2.57470978954193,4.10923123741212,3.19088635981346,3.59521532855532,2.62261207256992,1.66554880907831,3.23960427823721,3.49780939064073,2.68142840554502,2.87940310572051,4.66828616977833,13.0116233931137,4.96454756004426,3.91799683708403,15.5192650109604,17.4351053611049,43.0673973086265,27.5687677541808,23.0554218973901,23.7529274320467,44.3573028377478,11.7517170647311,5.08024538767705,3.69038872550742,0,9.24325183204079,8.31173226792462,7.35009682544529,7.95210098400125,2.3440060335714,6.80580867165938,13.5293242247133,16.3930916390027,9.22469670759192,11.7084040717287,12.8748702648783,10.4621648732158,8.60630478782843,11.5553332881637,11.4236815021925,11.2769341463084,5.31948402176378,4.31257693094915,2.68452169692378,2.90144856804538,1.68046899571232,9.00408026125814,5.44413535883638,6.18806510732931,24.8849246857305,38.0873505075864,31.0577387718028,5.42151251310611,4.4464739805557,3.5995988691256,3.9554654502679,2.1314403448383,8.38880309451533,15.7529505181837,19.1825782770684,21.7359560714022,24.8183454394631,30.564655331207,32.2468069789356,22.2933254571216,24.2489041676138,15.6267193723704,6.60695285996332,8.55505165170758,9.21639199537461,32.4440267816277,32.4781134788554,34.3802824567462,7.2587579740359,7.87867654044352,8.40390362772456,17.3830865429464,23.2065839702538,26.655120753018,5.52801211332244,5.06329452715463,4.63783181922684,6.0229671388697,1.3599426674155,9.17495425784289,8.4470934268197,7.16843019355737,7.5839986871146,26.416699999599,24.9394564418754,27.2071472372962,9.85903938436764,51.3305909657271,45.8649431471962,63.9960032837998,4.11332977921307,8.10751569520315,8.08839112023653,13.7020655662872,1.8125651855302,1.7813056687779,13.1848848342263,7.91610243611567,8.76338889573022,7.23468674652588,6.82014501387088,5.15233024451669,5.43828929015623,3.61498392299779,3.5384422077995,5.82360659810673,4.85851340612866,4.363877278217,5.59175283654366,5.27005434620785,4.39838084308256,22.480220858356,5.39168060276641,4.79922184794726,6.73472203487243,8.68785708547972,8.6925114535539,20.8586224507355,8.16974304903699,16.1100738118108,6.02585329222724,12.3303359931496,7.43427356107309,4.22983700074316,3.0326731012041,5.6819301089348,17.566259799965,17.2426578325105,17.8261508507296,13.5634336052144,10.2054748726992,10.249097622788,9.27647073141315,4.9153640440413,23.0657752438141,17.0195472151037,13.900138808952,13.8093311429372,9.73165372289593,8.00979983000983,5.55611768301447,13.1362616100206,4.91549231119264,6.43369767786788,7.10408748488982,10.9776659443816,11.2572508790926,11.884096056427,7.33908680314152,8.26409773339096,5.707883176833,6.27841650826101,5.90201483079162,3.03589890154641,4.11399624783701,2.95501435342371,1.78351381000883,1.75439984910399,0.878200461164203,1.34206418760372,9.04246778825747,17.6995933292369,14.2080076683033,13.7514294665043,13.2238715331845,14.8631469990681,14.1754207454303,10.2858597557905,7.78323153457046,8.94060442729028,14.7104009078799,11.5289268306808,9.55073793441024,6.16765063327568,10.3330966173134,16.178749355776,9.94235029423593,12.7450414882795,20.1047975010267,11.7675967988021,11.270773567308,10.386217720111,7.95205197387266,7.29412526859313,8.09427675190493,5.31396532726568,5.33795674660674,6.16985819609003,12.1545577105731,10.3443965543978,9.63139076054695,9.44420872016386,9.33156558387113,4.10001171579109,7.12952384987975,7.48009957372108,8.10676133875177,12.3552635934637,21.5652309791032,18.9791883310937,21.8426371180192,14.6495749209325,11.1226396383586,17.8504102904446,4.80358294433172,13.2643988239339,10.4297584922897,9.67546988918572,8.68353918667458,7.70528784232352,6.66522194480839,6.82967767502296,5.2019597555043,5.09368786192182,8.29164797018933,4.09658286789345,6.56202931090403,4.19482269886384,1.50791283939272,0.54390568381871,6.39293554924747,6.89841865761831,5.61927064957272,11.0178985396671,16.7213644284209,1.51482556322624,6.94118082715765,7.80877488593277,10.3403230911743,6.21318874676635,9.80314165962534,6.79383673893198,5.26253912177363,6.42962887404886,11.0680577825027,6.74774764485795,3.69044221541498,11.9303954457061,6.02681749608232,4.12425307431339,2.65490276679926,8.49732226542435,9.37203026590728,2.82907619633847,4.13422650033082,5.53383266299069,6.46070732920553,5.08947221268508,5.70395805415554,3.16036757935816,3.16255825724996,3.09406629744561,4.42571487479924,17.2858650270058,22.120334926851,18.4329850127169,18.4433842987965,13.9127677729615,15.6321569572015,8.82948352432338,6.33613611772018,3.38931313382112,0.882113592219848,4.28704257647848,4.03661066739764,5.85035371803112,5.61050016814741,5.74493149107714,12.2421951384537,6.30446026835733,5.12612642393558,11.3512777379772,8.70414278637645,4.70921142511728,7.24479406921433,4.80434163733698,4.75939603982795,7.55737842547753,4.14599921413271,9.54670618015114,14.0769517143605,13.0124458961183,11.5565714679327,12.3362094648537,8.07941485860857,7.8221320903196,7.60411792673091,5.49687478166462,3.49960427887841,0.621339313086926,71.5890032128922,10.1671251309906,10.4238848987971,7.77804753376191,7.62042958518613,8.10989402355735,5.51579021635044,5.85919731797776,4.8235298435827,36.4792022447269,35.1396607634596,5.05617793005085,12.1635129174099,8.52500944468066,5.71651621102298,7.16106782669926,6.55648470778174,5.7693815769585,7.38447635872886,6.66378569657774,5.94413091908999,5.24296162711571,7.79663045918019,6.06134602334076,5.02570679380746,2.0405734525369,5.54964883435162,7.53596395519596,7.72269235274761,3.09103350451505,4.31669693537719,3.84618410961257,7.93163002592544,3.51100472824754,18.0720589637461,19.7939851698086,23.4887160510153,22.6846200693668,15.7568979547248,10.5755145634558,14.1754725048679,6.75481804836331,4.98456649882625,9.83744592328458,27.1922850670543,17.9561193030464,17.9270286041841,10.6966955510049,14.4633082213308,11.3982975239009,7.55638874525492,9.47761263298913,7.38114182061175,6.31743029409494,8.11133759648767,7.9223063382152,6.367622507952,6.33849008808206,7.58148190214095,5.23923060411381,8.11190281613988,9.25964258225784,5.35711671044299,6.47675248591348,5.14303878578123,6.56660482789549,11.921809497366,7.26732083161643,8.75217237862575,6.68455402344244,7.50004688778368,8.41823076601097,7.4692262615224,6.73370725989286,7.3553711236988,7.88035859004508,7.36615877705441,7.90177890048427,6.17301155139652,10.7418548513317,9.35726433781634,7.09074478359384,4.20834330551455,2.42650561031467,4.40548887678801|short_description=p2@Atxn7l3b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:382423 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=27bp_to_ENSMUST00000165438_5end | |||
|cluster_id=chr10:112366005..112366029,- | |||
|description=CAGE_peak_2_at_Atxn7l3b_5end | |||
|id=chr10:112366005..112366029,- | |||
|ontology_enrichment_celltype=CL:0000117!2.31e-08!23;CL:0000337!2.31e-08!23;CL:0002321!1.69e-07!70;CL:0000220!1.69e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.31e-08,23;CL:0000337,2.31e-08,23;CL:0002321,1.69e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.46e-09!34;UBERON:0001049!3.63e-09!52;UBERON:0005068!3.63e-09!52;UBERON:0006241!3.63e-09!52;UBERON:0007135!3.63e-09!52;UBERON:0003056!5.10e-09!49;UBERON:0001017!1.41e-08!73;UBERON:0005743!1.41e-08!73;UBERON:0002780!1.80e-08!39;UBERON:0001890!1.80e-08!39;UBERON:0006240!1.80e-08!39;UBERON:0002346!1.81e-08!71;UBERON:0003075!1.81e-08!71;UBERON:0007284!1.81e-08!71;UBERON:0003080!1.93e-08!40;UBERON:0000073!6.74e-08!75;UBERON:0001016!6.74e-08!75;UBERON:0002791!3.55e-07!29;UBERON:0003528!3.55e-07!29;UBERON:0001893!3.55e-07!29;UBERON:0002616!4.26e-07!49;UBERON:0000955!6.89e-07!50;UBERON:0006238!6.89e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.14e-09,64;UBERON:0003075,1.14e-09,64;UBERON:0007284,1.14e-09,64;UBERON:0002020,1.46e-09,34;UBERON:0000073,3.21e-09,54;UBERON:0001049,3.63e-09,52;UBERON:0005068,3.63e-09,52;UBERON:0006241,3.63e-09,52;UBERON:0007135,3.63e-09,52;UBERON:0003056,5.10e-09,49;UBERON:0001017,1.41e-08,73;UBERON:0002780,1.80e-08,39;UBERON:0001890,1.80e-08,39;UBERON:0006240,1.80e-08,39;UBERON:0003080,1.93e-08,40;UBERON:0001016,6.74e-08,75;UBERON:0010371,1.35e-07,73;UBERON:0011216,2.07e-07,194;UBERON:0002616,2.59e-07,46;UBERON:0003528,3.55e-07,29;UBERON:0002791,3.55e-07,29;UBERON:0001893,3.55e-07,29;UBERON:0000955,4.34e-07,47;UBERON:0006238,4.34e-07,47;UBERON:0000160,5.10e-07,31 | |||
|phase1_expression=10.4096750618116,67.3522536743967,53.2349110085757,48.6967380203996,57.6030089438299,14.6054966563344,17.0537227634734,2.7115897922731,5.06839399746,2.57470978954193,4.10923123741212,3.19088635981346,3.59521532855532,2.62261207256992,1.66554880907831,3.23960427823721,3.49780939064073,2.68142840554502,2.87940310572051,4.66828616977833,13.0116233931137,4.96454756004426,3.91799683708403,15.5192650109604,17.4351053611049,43.0673973086265,27.5687677541808,23.0554218973901,23.7529274320467,44.3573028377478,11.7517170647311,5.08024538767705,3.69038872550742,0,9.24325183204079,8.31173226792462,7.35009682544529,7.95210098400125,2.3440060335714,6.80580867165938,13.5293242247133,16.3930916390027,9.22469670759192,11.7084040717287,12.8748702648783,10.4621648732158,8.60630478782843,11.5553332881637,11.4236815021925,11.2769341463084,5.31948402176378,4.31257693094915,2.68452169692378,2.90144856804538,1.68046899571232,9.00408026125814,5.44413535883638,6.18806510732931,24.8849246857305,38.0873505075864,31.0577387718028,5.42151251310611,4.4464739805557,3.5995988691256,3.9554654502679,2.1314403448383,8.38880309451533,15.7529505181837,19.1825782770684,21.7359560714022,24.8183454394631,30.564655331207,32.2468069789356,22.2933254571216,24.2489041676138,15.6267193723704,6.60695285996332,8.55505165170758,9.21639199537461,32.4440267816277,32.4781134788554,34.3802824567462,7.2587579740359,7.87867654044352,8.40390362772456,17.3830865429464,23.2065839702538,26.655120753018,5.52801211332244,5.06329452715463,4.63783181922684,6.0229671388697,1.3599426674155,9.17495425784289,8.4470934268197,7.16843019355737,7.5839986871146,26.416699999599,24.9394564418754,27.2071472372962,9.85903938436764,51.3305909657271,45.8649431471962,63.9960032837998,4.11332977921307,8.10751569520315,8.08839112023653,13.7020655662872,1.8125651855302,1.7813056687779,13.1848848342263,7.91610243611567,8.76338889573022,7.23468674652588,6.82014501387088,5.15233024451669,5.43828929015623,3.61498392299779,3.5384422077995,5.82360659810673,4.85851340612866,4.363877278217,5.59175283654366,5.27005434620785,4.39838084308256,22.480220858356,5.39168060276641,4.79922184794726,6.73472203487243,8.68785708547972,8.6925114535539,20.8586224507355,8.16974304903699,16.1100738118108,6.02585329222724,12.3303359931496,7.43427356107309,4.22983700074316,3.0326731012041,5.6819301089348,17.566259799965,17.2426578325105,17.8261508507296,13.5634336052144,10.2054748726992,10.249097622788,9.27647073141315,4.9153640440413,23.0657752438141,17.0195472151037,13.900138808952,13.8093311429372,9.73165372289593,8.00979983000983,5.55611768301447,13.1362616100206,4.91549231119264,6.43369767786788,7.10408748488982,10.9776659443816,11.2572508790926,11.884096056427,7.33908680314152,8.26409773339096,5.707883176833,6.27841650826101,5.90201483079162,3.03589890154641,4.11399624783701,2.95501435342371,1.78351381000883,1.75439984910399,0.878200461164203,1.34206418760372,9.04246778825747,17.6995933292369,14.2080076683033,13.7514294665043,13.2238715331845,14.8631469990681,14.1754207454303,10.2858597557905,7.78323153457046,8.94060442729028,14.7104009078799,11.5289268306808,9.55073793441024,6.16765063327568,10.3330966173134,16.178749355776,9.94235029423593,12.7450414882795,20.1047975010267,11.7675967988021,11.270773567308,10.386217720111,7.95205197387266,7.29412526859313,8.09427675190493,5.31396532726568,5.33795674660674,6.16985819609003,12.1545577105731,10.3443965543978,9.63139076054695,9.44420872016386,9.33156558387113,4.10001171579109,7.12952384987975,7.48009957372108,8.10676133875177,12.3552635934637,21.5652309791032,18.9791883310937,21.8426371180192,14.6495749209325,11.1226396383586,17.8504102904446,4.80358294433172,13.2643988239339,10.4297584922897,9.67546988918572,8.68353918667458,7.70528784232352,6.66522194480839,6.82967767502296,5.2019597555043,5.09368786192182,8.29164797018933,4.09658286789345,6.56202931090403,4.19482269886384,1.50791283939272,0.54390568381871,6.39293554924747,6.89841865761831,5.61927064957272,11.0178985396671,16.7213644284209,1.51482556322624,6.94118082715765,7.80877488593277,10.3403230911743,6.21318874676635,9.80314165962534,6.79383673893198,5.26253912177363,6.42962887404886,11.0680577825027,6.74774764485795,3.69044221541498,11.9303954457061,6.02681749608232,4.12425307431339,2.65490276679926,8.49732226542435,9.37203026590728,2.82907619633847,4.13422650033082,5.53383266299069,6.46070732920553,5.08947221268508,5.70395805415554,3.16036757935816,3.16255825724996,3.09406629744561,4.42571487479924,17.2858650270058,22.120334926851,18.4329850127169,18.4433842987965,13.9127677729615,15.6321569572015,8.82948352432338,6.33613611772018,3.38931313382112,0.882113592219848,4.28704257647848,4.03661066739764,5.85035371803112,5.61050016814741,5.74493149107714,12.2421951384537,6.30446026835733,5.12612642393558,11.3512777379772,8.70414278637645,4.70921142511728,7.24479406921433,4.80434163733698,4.75939603982795,7.55737842547753,4.14599921413271,9.54670618015114,14.0769517143605,13.0124458961183,11.5565714679327,12.3362094648537,8.07941485860857,7.8221320903196,7.60411792673091,5.49687478166462,3.49960427887841,0.621339313086926,71.5890032128922,10.1671251309906,10.4238848987971,7.77804753376191,7.62042958518613,8.10989402355735,5.51579021635044,5.85919731797776,4.8235298435827,36.4792022447269,35.1396607634596,5.05617793005085,12.1635129174099,8.52500944468066,5.71651621102298,7.16106782669926,6.55648470778174,5.7693815769585,7.38447635872886,6.66378569657774,5.94413091908999,5.24296162711571,7.79663045918019,6.06134602334076,5.02570679380746,2.0405734525369,5.54964883435162,7.53596395519596,7.72269235274761,3.09103350451505,4.31669693537719,3.84618410961257,7.93163002592544,3.51100472824754,18.0720589637461,19.7939851698086,23.4887160510153,22.6846200693668,15.7568979547248,10.5755145634558,14.1754725048679,6.75481804836331,4.98456649882625,9.83744592328458,27.1922850670543,17.9561193030464,17.9270286041841,10.6966955510049,14.4633082213308,11.3982975239009,7.55638874525492,9.47761263298913,7.38114182061175,6.31743029409494,8.11133759648767,7.9223063382152,6.367622507952,6.33849008808206,7.58148190214095,5.23923060411381,8.11190281613988,9.25964258225784,5.35711671044299,6.47675248591348,5.14303878578123,6.56660482789549,11.921809497366,7.26732083161643,8.75217237862575,6.68455402344244,7.50004688778368,8.41823076601097,7.4692262615224,6.73370725989286,7.3553711236988,7.88035859004508,7.36615877705441,7.90177890048427,6.17301155139652,10.7418548513317,9.35726433781634,7.09074478359384,4.20834330551455,2.42650561031467,4.40548887678801 | |||
|short_description=p2@Atxn7l3b | |||
}} |
Revision as of 21:21, 3 August 2015
Short description: | p2@Atxn7l3b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Atxn7l3b_5end |
Coexpression cluster: | NA |
Association with transcript: | 27bp_to_ENSMUST00000165438_5end |
EntrezGene: | 382423 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.31e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.31e-08 | 23 |
embryonic cell | 1.69e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.14e-09 | 64 |
neural plate | 1.14e-09 | 64 |
presumptive neural plate | 1.14e-09 | 64 |
gray matter | 1.46e-09 | 34 |
regional part of nervous system | 3.21e-09 | 54 |
neural tube | 3.63e-09 | 52 |
neural rod | 3.63e-09 | 52 |
future spinal cord | 3.63e-09 | 52 |
neural keel | 3.63e-09 | 52 |
pre-chordal neural plate | 5.10e-09 | 49 |
central nervous system | 1.41e-08 | 73 |
regional part of forebrain | 1.80e-08 | 39 |
forebrain | 1.80e-08 | 39 |
future forebrain | 1.80e-08 | 39 |
anterior neural tube | 1.93e-08 | 40 |
nervous system | 6.74e-08 | 75 |
ecto-epithelium | 1.35e-07 | 73 |
organ system subdivision | 2.07e-07 | 194 |
regional part of brain | 2.59e-07 | 46 |
brain grey matter | 3.55e-07 | 29 |
regional part of telencephalon | 3.55e-07 | 29 |
telencephalon | 3.55e-07 | 29 |
brain | 4.34e-07 | 47 |
future brain | 4.34e-07 | 47 |
intestine | 5.10e-07 | 31 |