FFCP PHASE1:Mm9::chr16:96747205..96747216,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=168|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:96747205..96747216,+|id=chr16:96747205..96747216,+|ontology_enrichment_celltype=CL:0000117!1.06e-14!23;CL:0000337!1.06e-14!23;CL:0000540!4.24e-09!33;CL:0000047!4.24e-09!33;CL:0000031!4.24e-09!33;CL:0000404!4.24e-09!33;CL:0000393!3.78e-07!39;CL:0000211!3.78e-07!39;CL:0002609!5.70e-07!6|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.11e-35!52;UBERON:0005068!1.11e-35!52;UBERON:0006241!1.11e-35!52;UBERON:0007135!1.11e-35!52;UBERON:0000955!6.48e-33!50;UBERON:0006238!6.48e-33!50;UBERON:0002020!1.19e-31!34;UBERON:0002616!3.07e-31!49;UBERON:0001017!1.67e-28!73;UBERON:0005743!1.67e-28!73;UBERON:0000073!1.75e-27!75;UBERON:0001016!1.75e-27!75;UBERON:0000033!3.80e-26!63;UBERON:0002791!5.18e-26!29;UBERON:0003528!5.18e-26!29;UBERON:0001893!5.18e-26!29;UBERON:0002346!2.10e-25!71;UBERON:0003075!2.10e-25!71;UBERON:0007284!2.10e-25!71;UBERON:0003080!7.86e-25!40;UBERON:0002780!1.27e-23!39;UBERON:0001890!1.27e-23!39;UBERON:0006240!1.27e-23!39;UBERON:0003056!9.08e-21!49;UBERON:0000956!1.17e-19!21;UBERON:0001869!1.17e-19!21;UBERON:0000203!1.17e-19!21;UBERON:0004121!6.25e-19!102;UBERON:0000924!6.25e-19!102;UBERON:0006601!6.25e-19!102;UBERON:0002021!6.89e-19!10;UBERON:0000411!6.89e-19!10;UBERON:0001950!6.89e-19!10;UBERON:0007811!9.08e-17!86;UBERON:0002619!9.41e-15!17;UBERON:0000153!1.36e-14!94;UBERON:0000025!2.35e-11!114;UBERON:0003076!4.87e-11!12;UBERON:0003057!4.87e-11!12;UBERON:0004111!4.87e-10!122;UBERON:0000369!1.11e-08!5;UBERON:0002435!1.11e-08!5;UBERON:0000204!1.11e-08!5;UBERON:0010082!1.11e-08!5;UBERON:0002240!5.08e-08!6;UBERON:0005174!5.08e-08!6;UBERON:0001137!5.08e-08!6;UBERON:0000064!1.44e-07!99;UBERON:0002420!1.95e-07!8;UBERON:0007245!1.95e-07!8;UBERON:0010009!1.95e-07!8;UBERON:0010011!1.95e-07!8;UBERON:0000454!1.95e-07!8;UBERON:0001948!9.93e-07!5;UBERON:0002315!9.93e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.52e-20,10;UBERON:0000411,2.52e-20,10;UBERON:0001950,2.52e-20,10;UBERON:0002619,1.48e-18,17;UBERON:0000956,4.24e-15,21;UBERON:0001869,4.24e-15,21;UBERON:0000203,4.24e-15,21;UBERON:0002020,2.20e-13,34;UBERON:0000073,1.59e-11,54;UBERON:0003528,4.97e-11,29;UBERON:0002791,4.97e-11,29;UBERON:0001893,4.97e-11,29;UBERON:0001049,8.10e-09,52;UBERON:0005068,8.10e-09,52;UBERON:0006241,8.10e-09,52;UBERON:0007135,8.10e-09,52;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75;UBERON:0002780,2.85e-08,39;UBERON:0001890,2.85e-08,39;UBERON:0006240,2.85e-08,39;UBERON:0003080,4.52e-08,40;UBERON:0002346,3.48e-07,64;UBERON:0003075,3.48e-07,64;UBERON:0007284,3.48e-07,64;UBERON:0002616,4.78e-07,46;UBERON:0000955,6.69e-07,47;UBERON:0006238,6.69e-07,47|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.210324961351382,0.856952953211411,0.662605622854841,0.367472397644862,0,1.83843757322004,0,3.70293280447044,0.921639199537461,0.263772575460388,0.0914876436024097,0.52091337055676,0,0,0.45839474333043,0.883885756421003,1.85083185038834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,0.149790639404823,0.915001205637253,0.251308704225729,0.173824320192276,0.511430914660661,0.20778804455956,0.324482526135515,0,0,0,0,0,0.459804208866946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0.407302655690628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73260649706906,0,0,2.25900737046827,0.920650473014354,1.71868654031819,2.23409137046794,0.685082519770642,1.5107877947794,0.675022500231806,0.45032120322422,0.906284817968409,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr16:96747205..96747216,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=168 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:96747205..96747216,+ | |||
|description=CAGE_peak_at_chr16:96747205..96747216,+ | |||
|id=chr16:96747205..96747216,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.06e-14!23;CL:0000337!1.06e-14!23;CL:0000540!4.24e-09!33;CL:0000047!4.24e-09!33;CL:0000031!4.24e-09!33;CL:0000404!4.24e-09!33;CL:0000393!3.78e-07!39;CL:0000211!3.78e-07!39;CL:0002609!5.70e-07!6 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.11e-35!52;UBERON:0005068!1.11e-35!52;UBERON:0006241!1.11e-35!52;UBERON:0007135!1.11e-35!52;UBERON:0000955!6.48e-33!50;UBERON:0006238!6.48e-33!50;UBERON:0002020!1.19e-31!34;UBERON:0002616!3.07e-31!49;UBERON:0001017!1.67e-28!73;UBERON:0005743!1.67e-28!73;UBERON:0000073!1.75e-27!75;UBERON:0001016!1.75e-27!75;UBERON:0000033!3.80e-26!63;UBERON:0002791!5.18e-26!29;UBERON:0003528!5.18e-26!29;UBERON:0001893!5.18e-26!29;UBERON:0002346!2.10e-25!71;UBERON:0003075!2.10e-25!71;UBERON:0007284!2.10e-25!71;UBERON:0003080!7.86e-25!40;UBERON:0002780!1.27e-23!39;UBERON:0001890!1.27e-23!39;UBERON:0006240!1.27e-23!39;UBERON:0003056!9.08e-21!49;UBERON:0000956!1.17e-19!21;UBERON:0001869!1.17e-19!21;UBERON:0000203!1.17e-19!21;UBERON:0004121!6.25e-19!102;UBERON:0000924!6.25e-19!102;UBERON:0006601!6.25e-19!102;UBERON:0002021!6.89e-19!10;UBERON:0000411!6.89e-19!10;UBERON:0001950!6.89e-19!10;UBERON:0007811!9.08e-17!86;UBERON:0002619!9.41e-15!17;UBERON:0000153!1.36e-14!94;UBERON:0000025!2.35e-11!114;UBERON:0003076!4.87e-11!12;UBERON:0003057!4.87e-11!12;UBERON:0004111!4.87e-10!122;UBERON:0000369!1.11e-08!5;UBERON:0002435!1.11e-08!5;UBERON:0000204!1.11e-08!5;UBERON:0010082!1.11e-08!5;UBERON:0002240!5.08e-08!6;UBERON:0005174!5.08e-08!6;UBERON:0001137!5.08e-08!6;UBERON:0000064!1.44e-07!99;UBERON:0002420!1.95e-07!8;UBERON:0007245!1.95e-07!8;UBERON:0010009!1.95e-07!8;UBERON:0010011!1.95e-07!8;UBERON:0000454!1.95e-07!8;UBERON:0001948!9.93e-07!5;UBERON:0002315!9.93e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.52e-20,10;UBERON:0000411,2.52e-20,10;UBERON:0001950,2.52e-20,10;UBERON:0002619,1.48e-18,17;UBERON:0000956,4.24e-15,21;UBERON:0001869,4.24e-15,21;UBERON:0000203,4.24e-15,21;UBERON:0002020,2.20e-13,34;UBERON:0000073,1.59e-11,54;UBERON:0003528,4.97e-11,29;UBERON:0002791,4.97e-11,29;UBERON:0001893,4.97e-11,29;UBERON:0001049,8.10e-09,52;UBERON:0005068,8.10e-09,52;UBERON:0006241,8.10e-09,52;UBERON:0007135,8.10e-09,52;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75;UBERON:0002780,2.85e-08,39;UBERON:0001890,2.85e-08,39;UBERON:0006240,2.85e-08,39;UBERON:0003080,4.52e-08,40;UBERON:0002346,3.48e-07,64;UBERON:0003075,3.48e-07,64;UBERON:0007284,3.48e-07,64;UBERON:0002616,4.78e-07,46;UBERON:0000955,6.69e-07,47;UBERON:0006238,6.69e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.210324961351382,0.856952953211411,0.662605622854841,0.367472397644862,0,1.83843757322004,0,3.70293280447044,0.921639199537461,0.263772575460388,0.0914876436024097,0.52091337055676,0,0,0.45839474333043,0.883885756421003,1.85083185038834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,0.149790639404823,0.915001205637253,0.251308704225729,0.173824320192276,0.511430914660661,0.20778804455956,0.324482526135515,0,0,0,0,0,0.459804208866946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0.407302655690628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73260649706906,0,0,2.25900737046827,0.920650473014354,1.71868654031819,2.23409137046794,0.685082519770642,1.5107877947794,0.675022500231806,0.45032120322422,0.906284817968409,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr16:96747205..96747216,+ | |||
}} |
Latest revision as of 06:45, 4 August 2015
Short description: | p@chr16:96747205..96747216, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:96747205..96747216, + |
Coexpression cluster: | MCL_coexpression_mm9:168 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.52e-20 | 10 |
visual cortex | 2.52e-20 | 10 |
neocortex | 2.52e-20 | 10 |
regional part of cerebral cortex | 1.48e-18 | 17 |
cerebral cortex | 4.24e-15 | 21 |
cerebral hemisphere | 4.24e-15 | 21 |
pallium | 4.24e-15 | 21 |
gray matter | 2.20e-13 | 34 |
regional part of nervous system | 1.59e-11 | 54 |
brain grey matter | 4.97e-11 | 29 |
regional part of telencephalon | 4.97e-11 | 29 |
telencephalon | 4.97e-11 | 29 |
neural tube | 8.10e-09 | 52 |
neural rod | 8.10e-09 | 52 |
future spinal cord | 8.10e-09 | 52 |
neural keel | 8.10e-09 | 52 |
central nervous system | 1.47e-08 | 73 |
nervous system | 2.47e-08 | 75 |
regional part of forebrain | 2.85e-08 | 39 |
forebrain | 2.85e-08 | 39 |
future forebrain | 2.85e-08 | 39 |
anterior neural tube | 4.52e-08 | 40 |
neurectoderm | 3.48e-07 | 64 |
neural plate | 3.48e-07 | 64 |
presumptive neural plate | 3.48e-07 | 64 |
regional part of brain | 4.78e-07 | 46 |
brain | 6.69e-07 | 47 |
future brain | 6.69e-07 | 47 |