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FFCP PHASE1:Mm9::chr3:94181376..94181403,+: Difference between revisions

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{{FFCP|EntrezGene=19885|HGNC=|MCL_coexpression_id=4|UniProt=D3YUU7|association_with_transcript=0bp_to_ENSMUST00000126783,uc008qfz.2,uc012ctm.1,uc012ctn.1_5end|description=CAGE_peak_2_at_Rorc_5end|id=chr3:94181376..94181403,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000893,1.58e-08,6;CL:0002489,1.58e-08,6;CL:0000898,1.58e-08,6;CL:0000809,1.58e-08,6;CL:0000810,1.58e-08,6;CL:0000895,1.58e-08,6;CL:0000808,1.58e-08,6;CL:0000894,1.58e-08,6;CL:0000806,1.58e-08,6;CL:0000807,1.58e-08,6;CL:0000805,1.58e-08,6;CL:0002425,1.58e-08,6;CL:0002436,1.58e-08,6;CL:0002427,1.58e-08,6;CL:0002428,1.58e-08,6;CL:0002429,1.58e-08,6;CL:0002433,1.58e-08,6;CL:0002431,1.58e-08,6;CL:0002432,1.58e-08,6;CL:0000084,5.35e-07,11;CL:0000827,5.35e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!4.82e-13!29;UBERON:0002370!2.11e-11!23;UBERON:0000974!2.11e-11!23;UBERON:0004807!2.11e-11!23;UBERON:0005058!2.11e-11!23;UBERON:0003351!2.11e-11!23;UBERON:0009113!2.11e-11!23;UBERON:0003295!2.11e-11!23;UBERON:0009722!2.11e-11!23;UBERON:0005562!2.11e-11!23;UBERON:0007690!2.11e-11!23;UBERON:0006562!1.20e-10!24;UBERON:0003408!1.20e-10!24;UBERON:0001557!1.20e-10!24;UBERON:0001042!1.20e-10!24;UBERON:0008814!1.20e-10!24;UBERON:0009145!1.20e-10!24;UBERON:0000065!1.50e-10!41;UBERON:0001004!4.40e-10!42;UBERON:0000072!9.63e-09!27;UBERON:0002193!1.66e-08!48;UBERON:0001007!3.29e-07!128;UBERON:0001555!3.29e-07!128;UBERON:0007026!3.29e-07!128;UBERON:0002390!5.17e-07!45;UBERON:0003061!5.17e-07!45;UBERON:0004119!7.23e-07!130;UBERON:0000925!7.23e-07!130;UBERON:0006595!7.23e-07!130;UBERON:0000063!8.17e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0002370,9.08e-35,23;UBERON:0000974,9.08e-35,23;UBERON:0004807,9.08e-35,23;UBERON:0005058,9.08e-35,23;UBERON:0003351,9.08e-35,23;UBERON:0009113,9.08e-35,23;UBERON:0003295,9.08e-35,23;UBERON:0009722,9.08e-35,23;UBERON:0005562,9.08e-35,23;UBERON:0007690,9.08e-35,23;UBERON:0006562,3.50e-33,24;UBERON:0003408,3.50e-33,24;UBERON:0001557,3.50e-33,24;UBERON:0001042,3.50e-33,24;UBERON:0008814,3.50e-33,24;UBERON:0009145,3.50e-33,24;UBERON:0004177,2.71e-30,29;UBERON:0005057,2.71e-30,29;UBERON:0000072,3.97e-29,27;UBERON:0000077,1.69e-24,35;UBERON:0007811,5.15e-21,36;UBERON:0000065,1.66e-20,41;UBERON:0001004,6.22e-20,42;UBERON:0002193,3.89e-19,48;UBERON:0002405,3.89e-19,48;UBERON:0002390,2.84e-18,45;UBERON:0003061,2.84e-18,45;UBERON:0000153,4.74e-17,43;UBERON:0003929,1.33e-12,55;UBERON:0002368,2.84e-11,60;UBERON:0005911,9.51e-11,69;UBERON:0002530,3.76e-10,65;UBERON:0001041,5.50e-10,80;UBERON:0000490,6.02e-10,66;UBERON:0003081,7.36e-09,87;UBERON:0000949,7.65e-09,72;UBERON:0004921,9.30e-07,114|phase1_expression=0,0,0,0,0,0,0,0.774739940649458,2.67498572088167,4.44722600011788,1.19852577757853,1.7549874978974,0,0,0.333109761815663,0,0,0.315462165358238,0,0,1.9559956734746,4.86525660884338,0.783599367416806,0.47997726838022,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.1418387971906,2.58937883647172,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0.268273401399619,1.28441876603886,0,0.492502392237286,0.162137619091711,0.877199924551994,0.439100230582101,0.134206418760372,0,0,0,0,0,0,0,0.201683524623343,0.667134131534611,0.760902504450237,0.474529061544512,0,1.25667604400135,0.596869416123452,0.974820435595601,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.369506380333209,0,0,0,0,2.1775813467436,0.238043640886014,0.390267295715598,0,0.44292937929755,0.318909537314974,0.327726629431476,0.345369963731791,0.578596234326046,0,0,0,0.551873492609465,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.178065603667255,0,0,0,0,0,0,0.295301892880773,0.307435147943927,0,0.727067458955011,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0,0,0,0,0,0.874442509889552,0,0.341741761595705,1.23832120777933,0.185194527369712,0.565105371014073,0.136694227721025,0,0.169978429993855,0,0,0,0,0.203319467126849,0.108005340821801,0,0.655087691238533,0.134864346384821,0.330613822901344,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,100.491536359761,0,0.616265742988964,17.7991527479579,53.7080087002444,68.1477046899739,75.2423513995005,90.5336801580158,93.696865551881,85.8850711001848,109.396410873472,98.4324595471499,97.9436547898554,129.382730714997,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0.44449345560323,0.412070114477788,0,0,1.2673964994512,0.565879024158229,0.749132059759059,0.512201219238954,0.287177344778066,0,0.231768651889711,0.77163688185482,0.824171801606613,0.441596760403192,0,0,0,0.290692833264657,0.752875043322645,0.0846146078916765,0.182927972872773,0.526139422875686,0.271608227691724,1.12228454331548,0.593175090620871,0.0985044823755635,0,0.309873682371932,0.385813221962283,0,1.40358965067245,0.859484216193193,0.191288332068843,0,0|short_description=p2@Rorc}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:19885
|HGNC=
|MCL_coexpression_id=4
|TSSclassifier=NA
|UniProt=uniprot:D3YUU7
|association_with_transcript=0bp_to_ENSMUST00000126783,uc008qfz.2,uc012ctm.1,uc012ctn.1_5end
|cluster_id=chr3:94181376..94181403,+
|description=CAGE_peak_2_at_Rorc_5end
|id=chr3:94181376..94181403,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000893,1.58e-08,6;CL:0002489,1.58e-08,6;CL:0000898,1.58e-08,6;CL:0000809,1.58e-08,6;CL:0000810,1.58e-08,6;CL:0000895,1.58e-08,6;CL:0000808,1.58e-08,6;CL:0000894,1.58e-08,6;CL:0000806,1.58e-08,6;CL:0000807,1.58e-08,6;CL:0000805,1.58e-08,6;CL:0002425,1.58e-08,6;CL:0002436,1.58e-08,6;CL:0002427,1.58e-08,6;CL:0002428,1.58e-08,6;CL:0002429,1.58e-08,6;CL:0002433,1.58e-08,6;CL:0002431,1.58e-08,6;CL:0002432,1.58e-08,6;CL:0000084,5.35e-07,11;CL:0000827,5.35e-07,11
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!4.82e-13!29;UBERON:0002370!2.11e-11!23;UBERON:0000974!2.11e-11!23;UBERON:0004807!2.11e-11!23;UBERON:0005058!2.11e-11!23;UBERON:0003351!2.11e-11!23;UBERON:0009113!2.11e-11!23;UBERON:0003295!2.11e-11!23;UBERON:0009722!2.11e-11!23;UBERON:0005562!2.11e-11!23;UBERON:0007690!2.11e-11!23;UBERON:0006562!1.20e-10!24;UBERON:0003408!1.20e-10!24;UBERON:0001557!1.20e-10!24;UBERON:0001042!1.20e-10!24;UBERON:0008814!1.20e-10!24;UBERON:0009145!1.20e-10!24;UBERON:0000065!1.50e-10!41;UBERON:0001004!4.40e-10!42;UBERON:0000072!9.63e-09!27;UBERON:0002193!1.66e-08!48;UBERON:0001007!3.29e-07!128;UBERON:0001555!3.29e-07!128;UBERON:0007026!3.29e-07!128;UBERON:0002390!5.17e-07!45;UBERON:0003061!5.17e-07!45;UBERON:0004119!7.23e-07!130;UBERON:0000925!7.23e-07!130;UBERON:0006595!7.23e-07!130;UBERON:0000063!8.17e-07!35
|ontology_enrichment_uberon_v019_2=UBERON:0002370,9.08e-35,23;UBERON:0000974,9.08e-35,23;UBERON:0004807,9.08e-35,23;UBERON:0005058,9.08e-35,23;UBERON:0003351,9.08e-35,23;UBERON:0009113,9.08e-35,23;UBERON:0003295,9.08e-35,23;UBERON:0009722,9.08e-35,23;UBERON:0005562,9.08e-35,23;UBERON:0007690,9.08e-35,23;UBERON:0006562,3.50e-33,24;UBERON:0003408,3.50e-33,24;UBERON:0001557,3.50e-33,24;UBERON:0001042,3.50e-33,24;UBERON:0008814,3.50e-33,24;UBERON:0009145,3.50e-33,24;UBERON:0004177,2.71e-30,29;UBERON:0005057,2.71e-30,29;UBERON:0000072,3.97e-29,27;UBERON:0000077,1.69e-24,35;UBERON:0007811,5.15e-21,36;UBERON:0000065,1.66e-20,41;UBERON:0001004,6.22e-20,42;UBERON:0002193,3.89e-19,48;UBERON:0002405,3.89e-19,48;UBERON:0002390,2.84e-18,45;UBERON:0003061,2.84e-18,45;UBERON:0000153,4.74e-17,43;UBERON:0003929,1.33e-12,55;UBERON:0002368,2.84e-11,60;UBERON:0005911,9.51e-11,69;UBERON:0002530,3.76e-10,65;UBERON:0001041,5.50e-10,80;UBERON:0000490,6.02e-10,66;UBERON:0003081,7.36e-09,87;UBERON:0000949,7.65e-09,72;UBERON:0004921,9.30e-07,114
|phase1_expression=0,0,0,0,0,0,0,0.774739940649458,2.67498572088167,4.44722600011788,1.19852577757853,1.7549874978974,0,0,0.333109761815663,0,0,0.315462165358238,0,0,1.9559956734746,4.86525660884338,0.783599367416806,0.47997726838022,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.1418387971906,2.58937883647172,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0.268273401399619,1.28441876603886,0,0.492502392237286,0.162137619091711,0.877199924551994,0.439100230582101,0.134206418760372,0,0,0,0,0,0,0,0.201683524623343,0.667134131534611,0.760902504450237,0.474529061544512,0,1.25667604400135,0.596869416123452,0.974820435595601,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.369506380333209,0,0,0,0,2.1775813467436,0.238043640886014,0.390267295715598,0,0.44292937929755,0.318909537314974,0.327726629431476,0.345369963731791,0.578596234326046,0,0,0,0.551873492609465,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.178065603667255,0,0,0,0,0,0,0.295301892880773,0.307435147943927,0,0.727067458955011,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0,0,0,0,0,0.874442509889552,0,0.341741761595705,1.23832120777933,0.185194527369712,0.565105371014073,0.136694227721025,0,0.169978429993855,0,0,0,0,0.203319467126849,0.108005340821801,0,0.655087691238533,0.134864346384821,0.330613822901344,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,100.491536359761,0,0.616265742988964,17.7991527479579,53.7080087002444,68.1477046899739,75.2423513995005,90.5336801580158,93.696865551881,85.8850711001848,109.396410873472,98.4324595471499,97.9436547898554,129.382730714997,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0.44449345560323,0.412070114477788,0,0,1.2673964994512,0.565879024158229,0.749132059759059,0.512201219238954,0.287177344778066,0,0.231768651889711,0.77163688185482,0.824171801606613,0.441596760403192,0,0,0,0.290692833264657,0.752875043322645,0.0846146078916765,0.182927972872773,0.526139422875686,0.271608227691724,1.12228454331548,0.593175090620871,0.0985044823755635,0,0.309873682371932,0.385813221962283,0,1.40358965067245,0.859484216193193,0.191288332068843,0,0
|short_description=p2@Rorc
}}

Revision as of 07:30, 4 August 2015

Short description:p2@Rorc
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rorc_5end
Coexpression cluster:MCL_coexpression_mm9:4
Association with transcript: 0bp_to_ENSMUST00000126783, uc008qfz.2, uc012ctm.1, uc012ctn.1_5end
EntrezGene:19885
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Rorc

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.67
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.75
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H92.59
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B5100.49
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C517.80
thymus, embryo E17.CNhs10581.478-18C153.71
thymus, embryo E18.CNhs10595.1273-19G468.15
thymus, neonate N02.CNhs11181.1541-43F875.24
thymus, neonate N03.CNhs11137.2104-43C790.53
thymus, neonate N06.CNhs11197.681-26C493.70
thymus, neonate N07.CNhs11211.713-19D385.89
thymus, neonate N10.CNhs11194.748-24E4109.40
thymus, neonate N20.CNhs11186.820-7A298.43
thymus, neonate N25.CNhs11125.1362-25G797.94
thymus, neonate N30.CNhs11132.1393-42G2129.38
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
thymocyte1.58e-086
double negative thymocyte1.58e-086
naive T cell1.58e-086
double-positive, alpha-beta thymocyte1.58e-086
CD4-positive, alpha-beta thymocyte1.58e-086
naive thymus-derived CD4-positive, alpha-beta T cell1.58e-086
DN4 thymocyte1.58e-086
DN1 thymic pro-T cell1.58e-086
DN2 thymocyte1.58e-086
DN3 thymocyte1.58e-086
immature single positive thymocyte1.58e-086
early T lineage precursor1.58e-086
mature CD4 single-positive thymocyte1.58e-086
resting double-positive thymocyte1.58e-086
double-positive blast1.58e-086
CD69-positive double-positive thymocyte1.58e-086
CD69-positive, CD4-positive single-positive thymocyte1.58e-086
CD4-positive, CD8-intermediate double-positive thymocyte1.58e-086
CD24-positive, CD4 single-positive thymocyte1.58e-086
T cell5.35e-0711
pro-T cell5.35e-0711

Uber anatomy
Ontology termp-valuen
thymus9.08e-3523
neck9.08e-3523
respiratory system epithelium9.08e-3523
hemolymphoid system gland9.08e-3523
pharyngeal epithelium9.08e-3523
thymic region9.08e-3523
pharyngeal gland9.08e-3523
entire pharyngeal arch endoderm9.08e-3523
thymus primordium9.08e-3523
early pharyngeal endoderm9.08e-3523
pharynx3.50e-3324
gland of gut3.50e-3324
upper respiratory tract3.50e-3324
chordate pharynx3.50e-3324
pharyngeal arch system3.50e-3324
pharyngeal region of foregut3.50e-3324
hemopoietic organ2.71e-3029
immune organ2.71e-3029
segment of respiratory tract3.97e-2927
mixed endoderm/mesoderm-derived structure1.69e-2435
craniocervical region5.15e-2136
respiratory tract1.66e-2041
respiratory system6.22e-2042
hemolymphoid system3.89e-1948
immune system3.89e-1948
hematopoietic system2.84e-1845
blood island2.84e-1845
anterior region of body4.74e-1743
gut epithelium1.33e-1255
endocrine gland2.84e-1160
endo-epithelium9.51e-1169
gland3.76e-1065
foregut5.50e-1080
unilaminar epithelium6.02e-1066
lateral plate mesoderm7.36e-0987
endocrine system7.65e-0972
subdivision of digestive tract9.30e-07114
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