FFCP PHASE1:Mm9::chr14:45839419..45839450,+: Difference between revisions
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{{FFCP|EntrezGene=70713|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=25bp_to_ENSMUST00000147957_5end|description=CAGE_peak_1_at_Gpr137c_5end|id=chr14:45839419..45839450,+|ontology_enrichment_celltype=CL:0000540!1.02e-14!33;CL:0000047!1.02e-14!33;CL:0000031!1.02e-14!33;CL:0000404!1.02e-14!33;CL:0000221!1.78e-14!44;CL:0000133!1.78e-14!44;CL:0002319!5.34e-14!43;CL:0000117!4.51e-13!23;CL:0000337!4.51e-13!23;CL:0000393!7.21e-10!39;CL:0000211!7.21e-10!39;CL:0000055!3.73e-09!50|ontology_enrichment_celltype_v019_2=CL:0000540,6.51e-15,33;CL:0000047,6.51e-15,33;CL:0000031,6.51e-15,33;CL:0000404,6.51e-15,33;CL:0000221,1.15e-14,44;CL:0000133,1.15e-14,44;CL:0002319,3.50e-14,43;CL:0000117,3.06e-13,23;CL:0000337,3.06e-13,23;CL:0000393,1.10e-09,39;CL:0000211,1.10e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.61e-28!75;UBERON:0001016!2.61e-28!75;UBERON:0001017!1.30e-27!73;UBERON:0005743!1.30e-27!73;UBERON:0004121!6.27e-27!102;UBERON:0000924!6.27e-27!102;UBERON:0006601!6.27e-27!102;UBERON:0000033!9.76e-25!63;UBERON:0002346!2.65e-22!71;UBERON:0003075!2.65e-22!71;UBERON:0007284!2.65e-22!71;UBERON:0001049!1.01e-20!52;UBERON:0005068!1.01e-20!52;UBERON:0006241!1.01e-20!52;UBERON:0007135!1.01e-20!52;UBERON:0000955!5.16e-20!50;UBERON:0006238!5.16e-20!50;UBERON:0003056!1.72e-19!49;UBERON:0002616!2.68e-19!49;UBERON:0002020!1.27e-15!34;UBERON:0003080!2.91e-15!40;UBERON:0002780!1.29e-14!39;UBERON:0001890!1.29e-14!39;UBERON:0006240!1.29e-14!39;UBERON:0007811!2.08e-14!86;UBERON:0000153!4.82e-14!94;UBERON:0002791!6.45e-13!29;UBERON:0003528!6.45e-13!29;UBERON:0001893!6.45e-13!29;UBERON:0000956!8.09e-09!21;UBERON:0001869!8.09e-09!21;UBERON:0000203!8.09e-09!21;UBERON:0002619!2.68e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0004121,7.21e-30,95;UBERON:0000924,7.21e-30,95;UBERON:0006601,7.21e-30,95;UBERON:0001016,1.05e-28,75;UBERON:0001017,5.35e-28,73;UBERON:0002346,2.42e-26,64;UBERON:0003075,2.42e-26,64;UBERON:0007284,2.42e-26,64;UBERON:0010371,7.00e-24,73;UBERON:0000073,1.67e-22,54;UBERON:0001049,5.26e-21,52;UBERON:0005068,5.26e-21,52;UBERON:0006241,5.26e-21,52;UBERON:0007135,5.26e-21,52;UBERON:0010314,2.98e-20,92;UBERON:0003056,9.36e-20,49;UBERON:0000955,2.96e-18,47;UBERON:0006238,2.96e-18,47;UBERON:0002616,1.51e-17,46;UBERON:0002020,7.89e-16,34;UBERON:0003080,1.83e-15,40;UBERON:0002780,8.26e-15,39;UBERON:0001890,8.26e-15,39;UBERON:0006240,8.26e-15,39;UBERON:0003528,4.39e-13,29;UBERON:0002791,4.39e-13,29;UBERON:0001893,4.39e-13,29;UBERON:0000956,6.32e-09,21;UBERON:0001869,6.32e-09,21;UBERON:0000203,6.32e-09,21;UBERON:0002619,2.20e-07,17|phase1_expression=7.52699581392532,1.04692622291808,1.36499771816861,4.83942738090928,5.00895729946347,3.18970616632591,0.934450562382103,22.3383349553927,6.89864738543167,11.2350972634557,0.513653904676515,0.159544317990673,15.4080656938085,15.1237296184865,1.33243904726265,2.63217847606774,0.699561878128147,14.0380663584416,13.9856722277854,22.9170411970936,7.05859308253879,1.19149141441062,0.783599367416806,0.159992422793407,0,0.57423196411502,1.7230479846363,0.861884930743556,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,5.19932915552294,2.1610503896604,5.3084032628216,21.3451131675823,18.7520482685712,4.18818995179039,25.2939539853336,23.9065919735456,9.22469670759192,0.251793635951155,0.811015449756117,0.550640256485045,3.9119567217402,4.14247797122848,2.41654801007919,4.6663175777828,1.53985063787899,4.31257693094915,24.3284778783718,5.07753499407941,4.7053131879945,0.514518872071894,0.85960031981627,2.06268836910977,21.2432283902578,28.5655128806898,22.1840991227163,0.338844532069132,1.77858959222228,0.449949858640699,0.988866362566974,0.7104801149461,5.39280198933128,6.14749288514487,14.2054768862614,12.9605700798423,13.8814474491912,18.852964970651,14.3564551618549,15.8013130987291,15.7186572469908,22.9804696652505,37.4393995397922,22.3452841649078,24.577045320999,26.2453712583086,17.7486028588675,25.0038417867245,11.725685958058,18.5711661310454,17.1134037510027,25.0434297652618,21.0710087582672,21.6223357157349,8.93569081331572,9.21973033302783,13.6236309689789,0,4.0798280022465,0,1.29955283489534,0.448026887097336,2.10666630197628,0,0.519572009205738,0,17.3237406325317,0,0,0,0.432982082022428,0.760079596425296,0,2.05530983494308,3.6251303710604,0.148442139064825,3.81667718885499,3.04465478312141,2.07553947530453,2.11011696773672,3.99801604261396,0.125666591329675,0.741584903203122,1.44599356919912,0,1.94120219936891,0.662524555381181,0.484875253135222,0,38.6470652055242,41.889341362691,0,0.838705871541442,1.19980546198682,1.27070227073065,25.0150367806054,23.7900313465686,18.4711897605911,17.3824320192276,18.4115129277838,23.4800490352303,24.3361894601636,4.88828946481518,2.48813941220186,13.8997517138521,9.6803253707778,10.4096354370163,12.8745178482745,10.4436035287103,11.7549757911858,21.3634607335169,22.9323559309881,27.3609035714408,22.2484898835553,3.01795190105979,6.61871280587367,4.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:70713 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=25bp_to_ENSMUST00000147957_5end | |||
|cluster_id=chr14:45839419..45839450,+ | |||
|description=CAGE_peak_1_at_Gpr137c_5end | |||
|id=chr14:45839419..45839450,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.02e-14!33;CL:0000047!1.02e-14!33;CL:0000031!1.02e-14!33;CL:0000404!1.02e-14!33;CL:0000221!1.78e-14!44;CL:0000133!1.78e-14!44;CL:0002319!5.34e-14!43;CL:0000117!4.51e-13!23;CL:0000337!4.51e-13!23;CL:0000393!7.21e-10!39;CL:0000211!7.21e-10!39;CL:0000055!3.73e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.51e-15,33;CL:0000047,6.51e-15,33;CL:0000031,6.51e-15,33;CL:0000404,6.51e-15,33;CL:0000221,1.15e-14,44;CL:0000133,1.15e-14,44;CL:0002319,3.50e-14,43;CL:0000117,3.06e-13,23;CL:0000337,3.06e-13,23;CL:0000393,1.10e-09,39;CL:0000211,1.10e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.61e-28!75;UBERON:0001016!2.61e-28!75;UBERON:0001017!1.30e-27!73;UBERON:0005743!1.30e-27!73;UBERON:0004121!6.27e-27!102;UBERON:0000924!6.27e-27!102;UBERON:0006601!6.27e-27!102;UBERON:0000033!9.76e-25!63;UBERON:0002346!2.65e-22!71;UBERON:0003075!2.65e-22!71;UBERON:0007284!2.65e-22!71;UBERON:0001049!1.01e-20!52;UBERON:0005068!1.01e-20!52;UBERON:0006241!1.01e-20!52;UBERON:0007135!1.01e-20!52;UBERON:0000955!5.16e-20!50;UBERON:0006238!5.16e-20!50;UBERON:0003056!1.72e-19!49;UBERON:0002616!2.68e-19!49;UBERON:0002020!1.27e-15!34;UBERON:0003080!2.91e-15!40;UBERON:0002780!1.29e-14!39;UBERON:0001890!1.29e-14!39;UBERON:0006240!1.29e-14!39;UBERON:0007811!2.08e-14!86;UBERON:0000153!4.82e-14!94;UBERON:0002791!6.45e-13!29;UBERON:0003528!6.45e-13!29;UBERON:0001893!6.45e-13!29;UBERON:0000956!8.09e-09!21;UBERON:0001869!8.09e-09!21;UBERON:0000203!8.09e-09!21;UBERON:0002619!2.68e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,7.21e-30,95;UBERON:0000924,7.21e-30,95;UBERON:0006601,7.21e-30,95;UBERON:0001016,1.05e-28,75;UBERON:0001017,5.35e-28,73;UBERON:0002346,2.42e-26,64;UBERON:0003075,2.42e-26,64;UBERON:0007284,2.42e-26,64;UBERON:0010371,7.00e-24,73;UBERON:0000073,1.67e-22,54;UBERON:0001049,5.26e-21,52;UBERON:0005068,5.26e-21,52;UBERON:0006241,5.26e-21,52;UBERON:0007135,5.26e-21,52;UBERON:0010314,2.98e-20,92;UBERON:0003056,9.36e-20,49;UBERON:0000955,2.96e-18,47;UBERON:0006238,2.96e-18,47;UBERON:0002616,1.51e-17,46;UBERON:0002020,7.89e-16,34;UBERON:0003080,1.83e-15,40;UBERON:0002780,8.26e-15,39;UBERON:0001890,8.26e-15,39;UBERON:0006240,8.26e-15,39;UBERON:0003528,4.39e-13,29;UBERON:0002791,4.39e-13,29;UBERON:0001893,4.39e-13,29;UBERON:0000956,6.32e-09,21;UBERON:0001869,6.32e-09,21;UBERON:0000203,6.32e-09,21;UBERON:0002619,2.20e-07,17 | |||
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| |||
|short_description=p1@Gpr137c | |||
}} |
Revision as of 08:02, 4 August 2015
Short description: | p1@Gpr137c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gpr137c_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 25bp_to_ENSMUST00000147957_5end |
EntrezGene: | 70713 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.51e-15 | 33 |
neuronal stem cell | 6.51e-15 | 33 |
neuroblast | 6.51e-15 | 33 |
electrically signaling cell | 6.51e-15 | 33 |
ectodermal cell | 1.15e-14 | 44 |
neurectodermal cell | 1.15e-14 | 44 |
neural cell | 3.50e-14 | 43 |
CNS neuron (sensu Vertebrata) | 3.06e-13 | 23 |
neuroblast (sensu Vertebrata) | 3.06e-13 | 23 |
electrically responsive cell | 1.10e-09 | 39 |
electrically active cell | 1.10e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 7.21e-30 | 95 |
ectoderm | 7.21e-30 | 95 |
presumptive ectoderm | 7.21e-30 | 95 |
nervous system | 1.05e-28 | 75 |
central nervous system | 5.35e-28 | 73 |
neurectoderm | 2.42e-26 | 64 |
neural plate | 2.42e-26 | 64 |
presumptive neural plate | 2.42e-26 | 64 |
ecto-epithelium | 7.00e-24 | 73 |
regional part of nervous system | 1.67e-22 | 54 |
neural tube | 5.26e-21 | 52 |
neural rod | 5.26e-21 | 52 |
future spinal cord | 5.26e-21 | 52 |
neural keel | 5.26e-21 | 52 |
structure with developmental contribution from neural crest | 2.98e-20 | 92 |
pre-chordal neural plate | 9.36e-20 | 49 |
brain | 2.96e-18 | 47 |
future brain | 2.96e-18 | 47 |
regional part of brain | 1.51e-17 | 46 |
gray matter | 7.89e-16 | 34 |
anterior neural tube | 1.83e-15 | 40 |
regional part of forebrain | 8.26e-15 | 39 |
forebrain | 8.26e-15 | 39 |
future forebrain | 8.26e-15 | 39 |
brain grey matter | 4.39e-13 | 29 |
regional part of telencephalon | 4.39e-13 | 29 |
telencephalon | 4.39e-13 | 29 |
cerebral cortex | 6.32e-09 | 21 |
cerebral hemisphere | 6.32e-09 | 21 |
pallium | 6.32e-09 | 21 |
regional part of cerebral cortex | 2.20e-07 | 17 |