FFCP PHASE1:Mm9::chr5:52581723..52581763,-: Difference between revisions
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{{FFCP|EntrezGene=13204|HGNC=|MCL_coexpression_id=2348|UniProt=O35286,Q3UKJ6,Q497W9|association_with_transcript=0bp_to_ENSMUST00000031061,NM_001042620,NM_007839,uc008xkf.1,uc008xkg.1,uc012dwe.1_5end|description=CAGE_peak_1_at_Dhx15_5end|id=chr5:52581723..52581763,-|ontology_enrichment_celltype=CL:0000542!5.76e-09!13;CL:0000051!5.76e-09!13;CL:0000838!2.18e-08!12;CL:0000084!9.68e-08!11;CL:0000827!9.68e-08!11;CL:0000791!3.27e-07!9;CL:0000789!3.27e-07!9;CL:0002420!3.27e-07!9;CL:0002419!3.27e-07!9;CL:0000790!3.27e-07!9|ontology_enrichment_celltype_v019_2=CL:0000542,5.76e-09,13;CL:0000051,5.76e-09,13;CL:0000838,2.18e-08,12;CL:0000084,9.68e-08,11;CL:0000827,9.68e-08,11;CL:0000791,3.27e-07,9;CL:0000789,3.27e-07,9;CL:0002420,3.27e-07,9;CL:0002419,3.27e-07,9;CL:0000790,3.27e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!3.57e-13!29;UBERON:0002370!1.66e-11!23;UBERON:0000974!1.66e-11!23;UBERON:0004807!1.66e-11!23;UBERON:0005058!1.66e-11!23;UBERON:0003351!1.66e-11!23;UBERON:0009113!1.66e-11!23;UBERON:0003295!1.66e-11!23;UBERON:0009722!1.66e-11!23;UBERON:0005562!1.66e-11!23;UBERON:0007690!1.66e-11!23;UBERON:0000065!5.06e-11!41;UBERON:0006562!7.80e-11!24;UBERON:0001557!7.80e-11!24;UBERON:0001042!7.80e-11!24;UBERON:0008814!7.80e-11!24;UBERON:0009145!7.80e-11!24;UBERON:0000072!1.21e-10!27;UBERON:0003408!1.44e-10!24;UBERON:0001004!2.11e-10!42;UBERON:0001041!1.68e-09!92;UBERON:0001048!4.04e-09!147;UBERON:0002390!4.28e-09!45;UBERON:0003061!4.28e-09!45;UBERON:0000077!1.81e-08!97;UBERON:0005057!2.30e-08!51;UBERON:0002193!2.55e-08!48|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.57e-13,29;UBERON:0005057,3.57e-13,29;UBERON:0000153,1.61e-11,43;UBERON:0002370,1.66e-11,23;UBERON:0000974,1.66e-11,23;UBERON:0004807,1.66e-11,23;UBERON:0005058,1.66e-11,23;UBERON:0003351,1.66e-11,23;UBERON:0009113,1.66e-11,23;UBERON:0003295,1.66e-11,23;UBERON:0009722,1.66e-11,23;UBERON:0005562,1.66e-11,23;UBERON:0007690,1.66e-11,23;UBERON:0000065,5.06e-11,41;UBERON:0006562,7.80e-11,24;UBERON:0001557,7.80e-11,24;UBERON:0001042,7.80e-11,24;UBERON:0008814,7.80e-11,24;UBERON:0009145,7.80e-11,24;UBERON:0000072,1.21e-10,27;UBERON:0003408,1.44e-10,24;UBERON:0000077,1.49e-10,35;UBERON:0001004,2.11e-10,42;UBERON:0007811,5.83e-10,36;UBERON:0002390,4.28e-09,45;UBERON:0003061,4.28e-09,45;UBERON:0002193,2.55e-08,48;UBERON:0002405,2.55e-08,48;UBERON:0001041,3.24e-08,80;UBERON:0001048,2.16e-07,134|phase1_expression=69.8248973376902,38.7362702479691,38.219936108721,40.5302043151152,40.0716583957078,72.6917247378483,77.5593966777145,95.5512593467664,270.877501419807,246.001817164415,161.629762004877,180.604167965442,120.354113141638,116.00687401001,99.2667090210675,101.237633694913,80.4496159847369,87.6984819695901,96.6656756920458,83.1803717524139,55.8734416292528,89.163274178395,90.3751270420716,51.0375828710967,46.5700840566355,35.0281498110162,43.5069616120666,51.7130958446134,44.6555035722479,57.4628695852642,51.663208982686,48.262331182932,46.1298590688428,47.5445043046316,75.6791243748339,69.3198471144913,70.0300891979926,43.9458212273753,50.0054620495232,60.2052305569868,45.8820560664191,50.545365886925,56.804711304645,53.5061476396203,53.7297735463427,55.4311191528278,14.0830441982647,18.3141131359575,13.6205433295373,31.4976436500339,26.0374744223174,12.9377307928474,131.20599793715,145.79779054428,158.972366994385,63.028561828807,57.5932214276901,53.629897596854,48.7582670671631,37.0293685490423,41.8328726314078,21.0083609882862,20.4537803105562,14.3983954765024,14.8329954385046,13.4991221839759,12.8828047522914,13.0634223809329,74.6565208621039,63.4527910158946,74.2447113570379,26.8511925339575,32.025938437984,70.6771911470285,73.7051672130238,60.6684399162614,41.8440347797677,45.0736303440713,49.6149102417666,45.8964281301075,52.7883703585904,65.6350846901518,39.3648028591947,38.8306200921859,48.1314480496952,50.6761167014708,55.2402121500519,54.4286381809878,77.0135386198482,71.868553661553,84.9302951895916,31.8356834483113,65.2772480359441,46.9541776724901,45.4843492213368,50.1790113549016,46.3466586434781,48.5726419347465,45.7223368101049,46.6408238353649,60.2809836644193,52.6138557398703,107.018200676791,92.4386714099331,72.7409897797679,77.2747589699051,75.3231423072027,59.1472496944731,95.2891411821592,53.8844964805314,60.025923061083,54.4993206178733,47.9680234292602,60.4397788616016,63.733079267552,46.4966387919799,47.2142388372654,50.3205762081293,91.9994974027869,61.4714029800155,70.6692859073259,80.4892920204469,50.325775528893,66.1684601246097,59.4828647350212,64.1197208573564,47.2071590553326,74.3879386431826,71.6676080692085,43.2894947879938,55.8150735438724,77.1517721972988,54.7546608605671,52.1659532953874,54.2326796300452,52.241686707818,76.3795228877372,64.3184038054181,54.3353930632401,65.2369753248069,94.2072007049975,74.7181839408787,86.9700086959837,81.983420902629,87.8351204043643,88.3984669965463,76.8354141389776,64.9345460554929,102.610364636033,108.546890016328,89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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13204 | |||
|HGNC= | |||
|MCL_coexpression_id=2348 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O35286,uniprot:Q3UKJ6,uniprot:Q497W9 | |||
|association_with_transcript=0bp_to_ENSMUST00000031061,NM_001042620,NM_007839,uc008xkf.1,uc008xkg.1,uc012dwe.1_5end | |||
|cluster_id=chr5:52581723..52581763,- | |||
|description=CAGE_peak_1_at_Dhx15_5end | |||
|id=chr5:52581723..52581763,- | |||
|ontology_enrichment_celltype=CL:0000542!5.76e-09!13;CL:0000051!5.76e-09!13;CL:0000838!2.18e-08!12;CL:0000084!9.68e-08!11;CL:0000827!9.68e-08!11;CL:0000791!3.27e-07!9;CL:0000789!3.27e-07!9;CL:0002420!3.27e-07!9;CL:0002419!3.27e-07!9;CL:0000790!3.27e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.76e-09,13;CL:0000051,5.76e-09,13;CL:0000838,2.18e-08,12;CL:0000084,9.68e-08,11;CL:0000827,9.68e-08,11;CL:0000791,3.27e-07,9;CL:0000789,3.27e-07,9;CL:0002420,3.27e-07,9;CL:0002419,3.27e-07,9;CL:0000790,3.27e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.57e-13!29;UBERON:0002370!1.66e-11!23;UBERON:0000974!1.66e-11!23;UBERON:0004807!1.66e-11!23;UBERON:0005058!1.66e-11!23;UBERON:0003351!1.66e-11!23;UBERON:0009113!1.66e-11!23;UBERON:0003295!1.66e-11!23;UBERON:0009722!1.66e-11!23;UBERON:0005562!1.66e-11!23;UBERON:0007690!1.66e-11!23;UBERON:0000065!5.06e-11!41;UBERON:0006562!7.80e-11!24;UBERON:0001557!7.80e-11!24;UBERON:0001042!7.80e-11!24;UBERON:0008814!7.80e-11!24;UBERON:0009145!7.80e-11!24;UBERON:0000072!1.21e-10!27;UBERON:0003408!1.44e-10!24;UBERON:0001004!2.11e-10!42;UBERON:0001041!1.68e-09!92;UBERON:0001048!4.04e-09!147;UBERON:0002390!4.28e-09!45;UBERON:0003061!4.28e-09!45;UBERON:0000077!1.81e-08!97;UBERON:0005057!2.30e-08!51;UBERON:0002193!2.55e-08!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.57e-13,29;UBERON:0005057,3.57e-13,29;UBERON:0000153,1.61e-11,43;UBERON:0002370,1.66e-11,23;UBERON:0000974,1.66e-11,23;UBERON:0004807,1.66e-11,23;UBERON:0005058,1.66e-11,23;UBERON:0003351,1.66e-11,23;UBERON:0009113,1.66e-11,23;UBERON:0003295,1.66e-11,23;UBERON:0009722,1.66e-11,23;UBERON:0005562,1.66e-11,23;UBERON:0007690,1.66e-11,23;UBERON:0000065,5.06e-11,41;UBERON:0006562,7.80e-11,24;UBERON:0001557,7.80e-11,24;UBERON:0001042,7.80e-11,24;UBERON:0008814,7.80e-11,24;UBERON:0009145,7.80e-11,24;UBERON:0000072,1.21e-10,27;UBERON:0003408,1.44e-10,24;UBERON:0000077,1.49e-10,35;UBERON:0001004,2.11e-10,42;UBERON:0007811,5.83e-10,36;UBERON:0002390,4.28e-09,45;UBERON:0003061,4.28e-09,45;UBERON:0002193,2.55e-08,48;UBERON:0002405,2.55e-08,48;UBERON:0001041,3.24e-08,80;UBERON:0001048,2.16e-07,134 | |||
|phase1_expression=69.8248973376902,38.7362702479691,38.219936108721,40.5302043151152,40.0716583957078,72.6917247378483,77.5593966777145,95.5512593467664,270.877501419807,246.001817164415,161.629762004877,180.604167965442,120.354113141638,116.00687401001,99.2667090210675,101.237633694913,80.4496159847369,87.6984819695901,96.6656756920458,83.1803717524139,55.8734416292528,89.163274178395,90.3751270420716,51.0375828710967,46.5700840566355,35.0281498110162,43.5069616120666,51.7130958446134,44.6555035722479,57.4628695852642,51.663208982686,48.262331182932,46.1298590688428,47.5445043046316,75.6791243748339,69.3198471144913,70.0300891979926,43.9458212273753,50.0054620495232,60.2052305569868,45.8820560664191,50.545365886925,56.804711304645,53.5061476396203,53.7297735463427,55.4311191528278,14.0830441982647,18.3141131359575,13.6205433295373,31.4976436500339,26.0374744223174,12.9377307928474,131.20599793715,145.79779054428,158.972366994385,63.028561828807,57.5932214276901,53.629897596854,48.7582670671631,37.0293685490423,41.8328726314078,21.0083609882862,20.4537803105562,14.3983954765024,14.8329954385046,13.4991221839759,12.8828047522914,13.0634223809329,74.6565208621039,63.4527910158946,74.2447113570379,26.8511925339575,32.025938437984,70.6771911470285,73.7051672130238,60.6684399162614,41.8440347797677,45.0736303440713,49.6149102417666,45.8964281301075,52.7883703585904,65.6350846901518,39.3648028591947,38.8306200921859,48.1314480496952,50.6761167014708,55.2402121500519,54.4286381809878,77.0135386198482,71.868553661553,84.9302951895916,31.8356834483113,65.2772480359441,46.9541776724901,45.4843492213368,50.1790113549016,46.3466586434781,48.5726419347465,45.7223368101049,46.6408238353649,60.2809836644193,52.6138557398703,107.018200676791,92.4386714099331,72.7409897797679,77.2747589699051,75.3231423072027,59.1472496944731,95.2891411821592,53.8844964805314,60.025923061083,54.4993206178733,47.9680234292602,60.4397788616016,63.733079267552,46.4966387919799,47.2142388372654,50.3205762081293,91.9994974027869,61.4714029800155,70.6692859073259,80.4892920204469,50.325775528893,66.1684601246097,59.4828647350212,64.1197208573564,47.2071590553326,74.3879386431826,71.6676080692085,43.2894947879938,55.8150735438724,77.1517721972988,54.7546608605671,52.1659532953874,54.2326796300452,52.241686707818,76.3795228877372,64.3184038054181,54.3353930632401,65.2369753248069,94.2072007049975,74.7181839408787,86.9700086959837,81.983420902629,87.8351204043643,88.3984669965463,76.8354141389776,64.9345460554929,102.610364636033,108.546890016328,89.2072199511221,84.3903569846163,83.1361275184538,72.0881984700885,71.6121834699643,80.2108095278528,106.736404471612,93.931986096871,90.3639928077985,64.0018637134701,73.172130714102,73.105196953172,57.7657154827913,68.6707168798439,69.1116665735455,74.4108623201305,54.9960472869219,66.9065411763881,55.127549721016,48.7577368314913,54.3161023957233,50.585195649165,55.5461791686358,49.7905813600979,50.2592977068264,79.1336469196697,38.6589976091044,62.67478429926,110.483313777251,90.8045386974315,95.6196563009932,70.3875500935465,68.9371935919098,52.6924984331789,68.8067139239542,60.444516383712,59.3151092768636,61.4775498607156,67.8475023174538,62.9173586057955,63.3284486132854,55.7595565112228,71.884134461218,93.9122773651971,76.6412602576947,85.3299063671867,75.641469995374,81.1471436130986,71.1411042647894,67.6054477746578,61.8574987695017,66.6344685177723,61.9585990612141,110.117769772622,91.2033737325262,104.336020146572,89.4613135323298,83.4472972743362,67.2212248702948,63.5808463766291,78.1491793055671,58.4815810090614,106.388472830242,68.4739343710046,57.4149318530791,57.8405630498886,58.6629542216653,53.0687873499704,64.478863368145,93.6087574146195,94.193756383491,95.9059734629813,89.4169845979193,86.0982163250933,72.8413541111202,69.0773113416608,83.8618966644936,85.2639055147783,73.8275578884165,68.6587288658942,62.1665934717224,64.8027782445172,36.1899081454253,34.2660580805787,62.4540626734176,63.7413883963932,43.990861656655,44.6576525916294,55.573946482693,44.687354115174,88.0267932171356,81.6016975579974,80.1375039566012,97.0213319687361,93.5754431146055,114.362918438688,80.557329633304,84.1696870784578,81.8245700349304,62.0150140694088,63.7310982585126,60.5423052468668,81.1177057580809,65.9880491890142,91.5941454545744,79.8748292949889,67.1158296461747,81.2887893747921,60.2415861476776,74.0918706544865,81.4049123479897,69.071408600726,90.1938367313345,84.3818143688629,72.7388399167491,85.6025008959951,59.2364914011591,92.9115245201561,53.0370603509293,68.3735141750779,78.3843832698849,57.7914969030709,58.5794513343551,40.7983031813563,62.422674344947,52.1106894324998,51.824173542916,107.505836917845,95.748405030672,85.0412241486998,85.3512259622426,98.4845398470368,65.2917074050866,40.7935664423121,94.3207262004147,74.5056593347233,86.8562333363948,96.6330184434065,116.600176246034,78.9284697562503,98.0775541064545,98.8057253405025,108.901579357886,34.3681422485441,101.069349949173,82.7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| |||
|short_description=p1@Dhx15 | |||
}} |
Revision as of 11:01, 4 August 2015
Short description: | p1@Dhx15 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dhx15_5end |
Coexpression cluster: | MCL_coexpression_mm9:2348 |
Association with transcript: | 0bp_to_ENSMUST00000031061, NM_001042620, NM_007839, uc008xkf.1, uc008xkg.1, uc012dwe.1_5end |
EntrezGene: | 13204 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.76e-09 | 13 |
common lymphoid progenitor | 5.76e-09 | 13 |
lymphoid lineage restricted progenitor cell | 2.18e-08 | 12 |
T cell | 9.68e-08 | 11 |
pro-T cell | 9.68e-08 | 11 |
mature alpha-beta T cell | 3.27e-07 | 9 |
alpha-beta T cell | 3.27e-07 | 9 |
immature T cell | 3.27e-07 | 9 |
mature T cell | 3.27e-07 | 9 |
immature alpha-beta T cell | 3.27e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 3.57e-13 | 29 |
immune organ | 3.57e-13 | 29 |
anterior region of body | 1.61e-11 | 43 |
thymus | 1.66e-11 | 23 |
neck | 1.66e-11 | 23 |
respiratory system epithelium | 1.66e-11 | 23 |
hemolymphoid system gland | 1.66e-11 | 23 |
pharyngeal epithelium | 1.66e-11 | 23 |
thymic region | 1.66e-11 | 23 |
pharyngeal gland | 1.66e-11 | 23 |
entire pharyngeal arch endoderm | 1.66e-11 | 23 |
thymus primordium | 1.66e-11 | 23 |
early pharyngeal endoderm | 1.66e-11 | 23 |
respiratory tract | 5.06e-11 | 41 |
pharynx | 7.80e-11 | 24 |
upper respiratory tract | 7.80e-11 | 24 |
chordate pharynx | 7.80e-11 | 24 |
pharyngeal arch system | 7.80e-11 | 24 |
pharyngeal region of foregut | 7.80e-11 | 24 |
segment of respiratory tract | 1.21e-10 | 27 |
gland of gut | 1.44e-10 | 24 |
mixed endoderm/mesoderm-derived structure | 1.49e-10 | 35 |
respiratory system | 2.11e-10 | 42 |
craniocervical region | 5.83e-10 | 36 |
hematopoietic system | 4.28e-09 | 45 |
blood island | 4.28e-09 | 45 |
hemolymphoid system | 2.55e-08 | 48 |
immune system | 2.55e-08 | 48 |
foregut | 3.24e-08 | 80 |
primordium | 2.16e-07 | 134 |