FFCP PHASE1:Mm9::chr5:64176084..64176086,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:64176084..64176086,+|id=chr5:64176084..64176086,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!1.29e-19!10;UBERON:0000411!1.29e-19!10;UBERON:0001950!1.29e-19!10;UBERON:0002619!1.03e-12!17;UBERON:0000956!8.72e-12!21;UBERON:0001869!8.72e-12!21;UBERON:0000203!8.72e-12!21;UBERON:0000033!2.61e-11!63;UBERON:0002616!7.79e-11!49;UBERON:0003056!7.91e-11!49;UBERON:0000955!1.64e-10!50;UBERON:0006238!1.64e-10!50;UBERON:0001049!5.89e-10!52;UBERON:0005068!5.89e-10!52;UBERON:0006241!5.89e-10!52;UBERON:0007135!5.89e-10!52;UBERON:0002346!2.27e-09!71;UBERON:0003075!2.27e-09!71;UBERON:0007284!2.27e-09!71;UBERON:0001017!5.23e-09!73;UBERON:0005743!5.23e-09!73;UBERON:0002791!6.34e-09!29;UBERON:0003528!6.34e-09!29;UBERON:0001893!6.34e-09!29;UBERON:0003080!6.44e-09!40;UBERON:0000073!1.33e-08!75;UBERON:0001016!1.33e-08!75;UBERON:0002020!2.80e-08!34;UBERON:0002780!6.08e-08!39;UBERON:0001890!6.08e-08!39;UBERON:0006240!6.08e-08!39;UBERON:0004121!2.01e-07!102;UBERON:0000924!2.01e-07!102;UBERON:0006601!2.01e-07!102;UBERON:0007811!2.34e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.63e-47,10;UBERON:0000411,2.63e-47,10;UBERON:0001950,2.63e-47,10;UBERON:0000956,2.36e-29,21;UBERON:0001869,2.36e-29,21;UBERON:0000203,2.36e-29,21;UBERON:0002619,7.17e-28,17;UBERON:0003528,3.07e-21,29;UBERON:0002791,3.07e-21,29;UBERON:0001893,3.07e-21,29;UBERON:0002020,4.24e-18,34;UBERON:0002780,9.29e-16,39;UBERON:0001890,9.29e-16,39;UBERON:0006240,9.29e-16,39;UBERON:0003080,2.33e-15,40;UBERON:0002616,2.49e-13,46;UBERON:0000955,4.83e-13,47;UBERON:0006238,4.83e-13,47;UBERON:0003056,1.68e-12,49;UBERON:0001049,9.14e-12,52;UBERON:0005068,9.14e-12,52;UBERON:0006241,9.14e-12,52;UBERON:0007135,9.14e-12,52;UBERON:0000073,2.55e-11,54;UBERON:0001851,3.65e-11,1;UBERON:0005889,3.65e-11,1;UBERON:0002346,1.66e-09,64;UBERON:0003075,1.66e-09,64;UBERON:0007284,1.66e-09,64;UBERON:0010371,2.71e-08,73;UBERON:0001017,2.71e-08,73;UBERON:0001016,4.60e-08,75|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.748953197024114,0,0,1.39059456153821,1.53429274398198,0.20778804455956,0.486723789203273,0,0,0,0.210441855886474,0,0,0,0.30140963567143,0,0,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0.464473343720877,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0,0,0,0.238968797952552,0.668396022247182,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,2.30162618253588,1.14579102687879,2.23409137046794,1.37016503954128,1.5107877947794,0.675022500231806,0.900642406448441,0.906284817968409,1.55328093525546,0,0,0.170733605754134,0.243106717068294,0,0,0.666740183404846,0,0.320919209591815,0.252697211763798,0.50695859978048,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0.282328141245992,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr5:64176084..64176086,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:64176084..64176086,+ | |||
|description=CAGE_peak_at_chr5:64176084..64176086,+ | |||
|id=chr5:64176084..64176086,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!1.29e-19!10;UBERON:0000411!1.29e-19!10;UBERON:0001950!1.29e-19!10;UBERON:0002619!1.03e-12!17;UBERON:0000956!8.72e-12!21;UBERON:0001869!8.72e-12!21;UBERON:0000203!8.72e-12!21;UBERON:0000033!2.61e-11!63;UBERON:0002616!7.79e-11!49;UBERON:0003056!7.91e-11!49;UBERON:0000955!1.64e-10!50;UBERON:0006238!1.64e-10!50;UBERON:0001049!5.89e-10!52;UBERON:0005068!5.89e-10!52;UBERON:0006241!5.89e-10!52;UBERON:0007135!5.89e-10!52;UBERON:0002346!2.27e-09!71;UBERON:0003075!2.27e-09!71;UBERON:0007284!2.27e-09!71;UBERON:0001017!5.23e-09!73;UBERON:0005743!5.23e-09!73;UBERON:0002791!6.34e-09!29;UBERON:0003528!6.34e-09!29;UBERON:0001893!6.34e-09!29;UBERON:0003080!6.44e-09!40;UBERON:0000073!1.33e-08!75;UBERON:0001016!1.33e-08!75;UBERON:0002020!2.80e-08!34;UBERON:0002780!6.08e-08!39;UBERON:0001890!6.08e-08!39;UBERON:0006240!6.08e-08!39;UBERON:0004121!2.01e-07!102;UBERON:0000924!2.01e-07!102;UBERON:0006601!2.01e-07!102;UBERON:0007811!2.34e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.63e-47,10;UBERON:0000411,2.63e-47,10;UBERON:0001950,2.63e-47,10;UBERON:0000956,2.36e-29,21;UBERON:0001869,2.36e-29,21;UBERON:0000203,2.36e-29,21;UBERON:0002619,7.17e-28,17;UBERON:0003528,3.07e-21,29;UBERON:0002791,3.07e-21,29;UBERON:0001893,3.07e-21,29;UBERON:0002020,4.24e-18,34;UBERON:0002780,9.29e-16,39;UBERON:0001890,9.29e-16,39;UBERON:0006240,9.29e-16,39;UBERON:0003080,2.33e-15,40;UBERON:0002616,2.49e-13,46;UBERON:0000955,4.83e-13,47;UBERON:0006238,4.83e-13,47;UBERON:0003056,1.68e-12,49;UBERON:0001049,9.14e-12,52;UBERON:0005068,9.14e-12,52;UBERON:0006241,9.14e-12,52;UBERON:0007135,9.14e-12,52;UBERON:0000073,2.55e-11,54;UBERON:0001851,3.65e-11,1;UBERON:0005889,3.65e-11,1;UBERON:0002346,1.66e-09,64;UBERON:0003075,1.66e-09,64;UBERON:0007284,1.66e-09,64;UBERON:0010371,2.71e-08,73;UBERON:0001017,2.71e-08,73;UBERON:0001016,4.60e-08,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.748953197024114,0,0,1.39059456153821,1.53429274398198,0.20778804455956,0.486723789203273,0,0,0,0.210441855886474,0,0,0,0.30140963567143,0,0,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0.464473343720877,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0,0,0,0.238968797952552,0.668396022247182,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,2.30162618253588,1.14579102687879,2.23409137046794,1.37016503954128,1.5107877947794,0.675022500231806,0.900642406448441,0.906284817968409,1.55328093525546,0,0,0.170733605754134,0.243106717068294,0,0,0.666740183404846,0,0.320919209591815,0.252697211763798,0.50695859978048,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0.282328141245992,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:64176084..64176086,+ | |||
}} |
Latest revision as of 12:08, 4 August 2015
Short description: | p@chr5:64176084..64176086, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:64176084..64176086, + |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.63e-47 | 10 |
visual cortex | 2.63e-47 | 10 |
neocortex | 2.63e-47 | 10 |
cerebral cortex | 2.36e-29 | 21 |
cerebral hemisphere | 2.36e-29 | 21 |
pallium | 2.36e-29 | 21 |
regional part of cerebral cortex | 7.17e-28 | 17 |
brain grey matter | 3.07e-21 | 29 |
regional part of telencephalon | 3.07e-21 | 29 |
telencephalon | 3.07e-21 | 29 |
gray matter | 4.24e-18 | 34 |
regional part of forebrain | 9.29e-16 | 39 |
forebrain | 9.29e-16 | 39 |
future forebrain | 9.29e-16 | 39 |
anterior neural tube | 2.33e-15 | 40 |
regional part of brain | 2.49e-13 | 46 |
brain | 4.83e-13 | 47 |
future brain | 4.83e-13 | 47 |
pre-chordal neural plate | 1.68e-12 | 49 |
neural tube | 9.14e-12 | 52 |
neural rod | 9.14e-12 | 52 |
future spinal cord | 9.14e-12 | 52 |
neural keel | 9.14e-12 | 52 |
regional part of nervous system | 2.55e-11 | 54 |
cortex | 3.65e-11 | 1 |
zygote cortex | 3.65e-11 | 1 |
neurectoderm | 1.66e-09 | 64 |
neural plate | 1.66e-09 | 64 |
presumptive neural plate | 1.66e-09 | 64 |
ecto-epithelium | 2.71e-08 | 73 |
central nervous system | 2.71e-08 | 73 |
nervous system | 4.60e-08 | 75 |