FFCP PHASE1:Mm9::chr11:98407512..98407517,-: Difference between revisions
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{{FFCP|EntrezGene=22780|HGNC=|MCL_coexpression_id=202|UniProt=O08900|association_with_transcript=-167bp_to_ENSMUST00000152400,NM_011771,uc007lgm.1,uc007lgn.1_5end|description=CAGE_peak_13_at_Ikzf3_5end|id=chr11:98407512..98407517,-|ontology_enrichment_celltype=CL:0000553!2.48e-08!6;CL:0000556!2.48e-08!6;CL:0002031!2.72e-08!25|ontology_enrichment_celltype_v019_2=CL:0000553,4.04e-11,6;CL:0000556,4.04e-11,6;CL:0000945,3.50e-08,1;CL:0000236,3.50e-08,1;CL:0000826,3.50e-08,1;CL:0000815,6.57e-08,1;CL:0000792,6.57e-08,1;CL:0000050,1.38e-07,9;CL:0002031,7.10e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!6.59e-29!48;UBERON:0004177!2.82e-26!29;UBERON:0002390!1.74e-24!45;UBERON:0003061!1.74e-24!45;UBERON:0002370!4.03e-20!23;UBERON:0000974!4.03e-20!23;UBERON:0004807!4.03e-20!23;UBERON:0005058!4.03e-20!23;UBERON:0003351!4.03e-20!23;UBERON:0009113!4.03e-20!23;UBERON:0003295!4.03e-20!23;UBERON:0009722!4.03e-20!23;UBERON:0005562!4.03e-20!23;UBERON:0007690!4.03e-20!23;UBERON:0002405!4.07e-20!70;UBERON:0006562!4.33e-19!24;UBERON:0003408!4.33e-19!24;UBERON:0001557!4.33e-19!24;UBERON:0001042!4.33e-19!24;UBERON:0008814!4.33e-19!24;UBERON:0009145!4.33e-19!24;UBERON:0000072!1.85e-16!27;UBERON:0005057!4.22e-15!51;UBERON:0000063!2.23e-13!35;UBERON:0003081!3.64e-13!88;UBERON:0000065!5.65e-12!41;UBERON:0001004!1.42e-11!42;UBERON:0001007!6.41e-10!128;UBERON:0001555!6.41e-10!128;UBERON:0007026!6.41e-10!128;UBERON:0004119!1.24e-09!130;UBERON:0000925!1.24e-09!130;UBERON:0006595!1.24e-09!130;UBERON:0001041!9.42e-09!92;UBERON:0000077!9.55e-09!97;UBERON:0004921!1.46e-08!126;UBERON:0004185!1.46e-08!126;UBERON:0000064!6.06e-08!99;UBERON:0003929!1.12e-07!55;UBERON:0002106!2.55e-07!6;UBERON:0004457!2.55e-07!6;UBERON:0000042!2.55e-07!6;UBERON:0004854!2.55e-07!6;UBERON:0009034!2.55e-07!6;UBERON:0002095!2.55e-07!6;UBERON:0004782!2.55e-07!6;UBERON:0003281!2.55e-07!6;UBERON:0009664!2.55e-07!6;UBERON:0002296!2.55e-07!6;UBERON:0005602!2.55e-07!6;UBERON:0001179!2.55e-07!6;UBERON:0006293!2.55e-07!6;UBERON:0005911!9.73e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.01e-16,48;UBERON:0002405,4.01e-16,48;UBERON:0002390,3.97e-14,45;UBERON:0003061,3.97e-14,45;UBERON:0002370,8.44e-14,23;UBERON:0000974,8.44e-14,23;UBERON:0004807,8.44e-14,23;UBERON:0005058,8.44e-14,23;UBERON:0003351,8.44e-14,23;UBERON:0009113,8.44e-14,23;UBERON:0003295,8.44e-14,23;UBERON:0009722,8.44e-14,23;UBERON:0005562,8.44e-14,23;UBERON:0007690,8.44e-14,23;UBERON:0006562,3.31e-13,24;UBERON:0003408,3.31e-13,24;UBERON:0001557,3.31e-13,24;UBERON:0001042,3.31e-13,24;UBERON:0008814,3.31e-13,24;UBERON:0009145,3.31e-13,24;UBERON:0000072,1.09e-11,27;UBERON:0004177,7.56e-11,29;UBERON:0005057,7.56e-11,29;UBERON:0000077,6.68e-09,35;UBERON:0007811,1.22e-08,36;UBERON:0000029,2.16e-08,1;UBERON:0001097,2.16e-08,1;UBERON:0003968,2.16e-08,1;UBERON:0001467,2.16e-08,1;UBERON:0000065,1.61e-07,41;UBERON:0001004,2.50e-07,42;UBERON:0000153,3.82e-07,43;UBERON:0003081,8.51e-07,87|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,0.281577444303333,0.234064526321993,0.171217968225505,0,0,0.0874204024189974,0.333109761815663,0.202475267389826,0,2.68142840554502,2.33094537129756,1.27316895539409,0.0850432901510698,0,0,0.47997726838022,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.07150306917737,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0.185194527369712,0.188368457004691,0.683471138605126,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0,0.102710957164827,0.25984164595559,0.537080087002444,1.78813219303138,1.08175904567972,1.03382669022204,0.504832249740738,0.609654453239999,1.41156659191577,1.36441033035653,0.865906574762965,1.05189211963412,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p13@Ikzf3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22780 | |||
|HGNC= | |||
|MCL_coexpression_id=202 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O08900 | |||
|association_with_transcript=-167bp_to_ENSMUST00000152400,NM_011771,uc007lgm.1,uc007lgn.1_5end | |||
|cluster_id=chr11:98407512..98407517,- | |||
|description=CAGE_peak_13_at_Ikzf3_5end | |||
|id=chr11:98407512..98407517,- | |||
|ontology_enrichment_celltype=CL:0000553!2.48e-08!6;CL:0000556!2.48e-08!6;CL:0002031!2.72e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,4.04e-11,6;CL:0000556,4.04e-11,6;CL:0000945,3.50e-08,1;CL:0000236,3.50e-08,1;CL:0000826,3.50e-08,1;CL:0000815,6.57e-08,1;CL:0000792,6.57e-08,1;CL:0000050,1.38e-07,9;CL:0002031,7.10e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.59e-29!48;UBERON:0004177!2.82e-26!29;UBERON:0002390!1.74e-24!45;UBERON:0003061!1.74e-24!45;UBERON:0002370!4.03e-20!23;UBERON:0000974!4.03e-20!23;UBERON:0004807!4.03e-20!23;UBERON:0005058!4.03e-20!23;UBERON:0003351!4.03e-20!23;UBERON:0009113!4.03e-20!23;UBERON:0003295!4.03e-20!23;UBERON:0009722!4.03e-20!23;UBERON:0005562!4.03e-20!23;UBERON:0007690!4.03e-20!23;UBERON:0002405!4.07e-20!70;UBERON:0006562!4.33e-19!24;UBERON:0003408!4.33e-19!24;UBERON:0001557!4.33e-19!24;UBERON:0001042!4.33e-19!24;UBERON:0008814!4.33e-19!24;UBERON:0009145!4.33e-19!24;UBERON:0000072!1.85e-16!27;UBERON:0005057!4.22e-15!51;UBERON:0000063!2.23e-13!35;UBERON:0003081!3.64e-13!88;UBERON:0000065!5.65e-12!41;UBERON:0001004!1.42e-11!42;UBERON:0001007!6.41e-10!128;UBERON:0001555!6.41e-10!128;UBERON:0007026!6.41e-10!128;UBERON:0004119!1.24e-09!130;UBERON:0000925!1.24e-09!130;UBERON:0006595!1.24e-09!130;UBERON:0001041!9.42e-09!92;UBERON:0000077!9.55e-09!97;UBERON:0004921!1.46e-08!126;UBERON:0004185!1.46e-08!126;UBERON:0000064!6.06e-08!99;UBERON:0003929!1.12e-07!55;UBERON:0002106!2.55e-07!6;UBERON:0004457!2.55e-07!6;UBERON:0000042!2.55e-07!6;UBERON:0004854!2.55e-07!6;UBERON:0009034!2.55e-07!6;UBERON:0002095!2.55e-07!6;UBERON:0004782!2.55e-07!6;UBERON:0003281!2.55e-07!6;UBERON:0009664!2.55e-07!6;UBERON:0002296!2.55e-07!6;UBERON:0005602!2.55e-07!6;UBERON:0001179!2.55e-07!6;UBERON:0006293!2.55e-07!6;UBERON:0005911!9.73e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.01e-16,48;UBERON:0002405,4.01e-16,48;UBERON:0002390,3.97e-14,45;UBERON:0003061,3.97e-14,45;UBERON:0002370,8.44e-14,23;UBERON:0000974,8.44e-14,23;UBERON:0004807,8.44e-14,23;UBERON:0005058,8.44e-14,23;UBERON:0003351,8.44e-14,23;UBERON:0009113,8.44e-14,23;UBERON:0003295,8.44e-14,23;UBERON:0009722,8.44e-14,23;UBERON:0005562,8.44e-14,23;UBERON:0007690,8.44e-14,23;UBERON:0006562,3.31e-13,24;UBERON:0003408,3.31e-13,24;UBERON:0001557,3.31e-13,24;UBERON:0001042,3.31e-13,24;UBERON:0008814,3.31e-13,24;UBERON:0009145,3.31e-13,24;UBERON:0000072,1.09e-11,27;UBERON:0004177,7.56e-11,29;UBERON:0005057,7.56e-11,29;UBERON:0000077,6.68e-09,35;UBERON:0007811,1.22e-08,36;UBERON:0000029,2.16e-08,1;UBERON:0001097,2.16e-08,1;UBERON:0003968,2.16e-08,1;UBERON:0001467,2.16e-08,1;UBERON:0000065,1.61e-07,41;UBERON:0001004,2.50e-07,42;UBERON:0000153,3.82e-07,43;UBERON:0003081,8.51e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,0.281577444303333,0.234064526321993,0.171217968225505,0,0,0.0874204024189974,0.333109761815663,0.202475267389826,0,2.68142840554502,2.33094537129756,1.27316895539409,0.0850432901510698,0,0,0.47997726838022,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.07150306917737,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0.185194527369712,0.188368457004691,0.683471138605126,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0,0.102710957164827,0.25984164595559,0.537080087002444,1.78813219303138,1.08175904567972,1.03382669022204,0.504832249740738,0.609654453239999,1.41156659191577,1.36441033035653,0.865906574762965,1.05189211963412,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p13@Ikzf3 | |||
}} |
Revision as of 12:31, 4 August 2015
Short description: | p13@Ikzf3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Ikzf3_5end |
Coexpression cluster: | MCL_coexpression_mm9:202 |
Association with transcript: | -167bp_to_ENSMUST00000152400, NM_011771, uc007lgm.1, uc007lgn.1_5end |
EntrezGene: | 22780 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 4.04e-11 | 6 |
megakaryocyte | 4.04e-11 | 6 |
lymphocyte of B lineage | 3.50e-08 | 1 |
B cell | 3.50e-08 | 1 |
pro-B cell | 3.50e-08 | 1 |
regulatory T cell | 6.57e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.57e-08 | 1 |
megakaryocyte-erythroid progenitor cell | 1.38e-07 | 9 |
hematopoietic lineage restricted progenitor cell | 7.10e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.01e-16 | 48 |
immune system | 4.01e-16 | 48 |
hematopoietic system | 3.97e-14 | 45 |
blood island | 3.97e-14 | 45 |
thymus | 8.44e-14 | 23 |
neck | 8.44e-14 | 23 |
respiratory system epithelium | 8.44e-14 | 23 |
hemolymphoid system gland | 8.44e-14 | 23 |
pharyngeal epithelium | 8.44e-14 | 23 |
thymic region | 8.44e-14 | 23 |
pharyngeal gland | 8.44e-14 | 23 |
entire pharyngeal arch endoderm | 8.44e-14 | 23 |
thymus primordium | 8.44e-14 | 23 |
early pharyngeal endoderm | 8.44e-14 | 23 |
pharynx | 3.31e-13 | 24 |
gland of gut | 3.31e-13 | 24 |
upper respiratory tract | 3.31e-13 | 24 |
chordate pharynx | 3.31e-13 | 24 |
pharyngeal arch system | 3.31e-13 | 24 |
pharyngeal region of foregut | 3.31e-13 | 24 |
segment of respiratory tract | 1.09e-11 | 27 |
hemopoietic organ | 7.56e-11 | 29 |
immune organ | 7.56e-11 | 29 |
mixed endoderm/mesoderm-derived structure | 6.68e-09 | 35 |
craniocervical region | 1.22e-08 | 36 |
lymph node | 2.16e-08 | 1 |
axillary lymph node | 2.16e-08 | 1 |
peripheral lymph node | 2.16e-08 | 1 |
shoulder | 2.16e-08 | 1 |
respiratory tract | 1.61e-07 | 41 |
respiratory system | 2.50e-07 | 42 |
anterior region of body | 3.82e-07 | 43 |
lateral plate mesoderm | 8.51e-07 | 87 |