FFCP PHASE1:Mm9::chr7:16973140..16973189,-: Difference between revisions
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{{FFCP|EntrezGene=56459|HGNC=|UniProt=Q9R1T2|association_with_transcript=0bp_to_ENSMUST00000094815_5end|description=CAGE_peak_1_at_Sae1_5end|id=chr7:16973140..16973189,-|ontology_enrichment_celltype=CL:0002319!4.99e-13!43;CL:0000221!1.00e-12!44;CL:0000133!1.00e-12!44;CL:0000540!1.00e-11!33;CL:0000047!1.00e-11!33;CL:0000031!1.00e-11!33;CL:0000404!1.00e-11!33;CL:0000055!2.72e-11!50;CL:0000393!1.27e-10!39;CL:0000211!1.27e-10!39;CL:0000117!3.19e-08!23;CL:0000337!3.19e-08!23|ontology_enrichment_celltype_v019_2=CL:0002319,4.99e-13,43;CL:0000221,1.00e-12,44;CL:0000133,1.00e-12,44;CL:0000540,1.00e-11,33;CL:0000047,1.00e-11,33;CL:0000031,1.00e-11,33;CL:0000404,1.00e-11,33;CL:0000393,1.27e-10,39;CL:0000211,1.27e-10,39;CL:0000117,3.19e-08,23;CL:0000337,3.19e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.14e-14!75;UBERON:0001016!5.14e-14!75;UBERON:0001017!8.75e-14!73;UBERON:0005743!8.75e-14!73;UBERON:0002020!1.01e-10!34;UBERON:0004121!8.74e-10!102;UBERON:0000924!8.74e-10!102;UBERON:0006601!8.74e-10!102;UBERON:0002791!1.01e-09!29;UBERON:0003528!1.01e-09!29;UBERON:0001893!1.01e-09!29;UBERON:0002780!8.65e-09!39;UBERON:0001890!8.65e-09!39;UBERON:0006240!8.65e-09!39;UBERON:0003080!1.36e-08!40;UBERON:0003056!2.84e-08!49;UBERON:0001049!3.61e-08!52;UBERON:0005068!3.61e-08!52;UBERON:0006241!3.61e-08!52;UBERON:0007135!3.61e-08!52;UBERON:0002346!5.56e-08!71;UBERON:0003075!5.56e-08!71;UBERON:0007284!5.56e-08!71;UBERON:0000955!6.92e-08!50;UBERON:0006238!6.92e-08!50;UBERON:0002616!6.94e-08!49;UBERON:0000956!7.33e-08!21;UBERON:0001869!7.33e-08!21;UBERON:0000203!7.33e-08!21|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.14e-14,75;UBERON:0001017,8.75e-14,73;UBERON:0004121,6.77e-11,95;UBERON:0000924,6.77e-11,95;UBERON:0006601,6.77e-11,95;UBERON:0002020,1.01e-10,34;UBERON:0003528,1.01e-09,29;UBERON:0002791,1.01e-09,29;UBERON:0001893,1.01e-09,29;UBERON:0002346,2.79e-09,64;UBERON:0003075,2.79e-09,64;UBERON:0007284,2.79e-09,64;UBERON:0000073,6.18e-09,54;UBERON:0002780,8.65e-09,39;UBERON:0001890,8.65e-09,39;UBERON:0006240,8.65e-09,39;UBERON:0003080,1.36e-08,40;UBERON:0003056,2.84e-08,49;UBERON:0001049,3.61e-08,52;UBERON:0005068,3.61e-08,52;UBERON:0006241,3.61e-08,52;UBERON:0007135,3.61e-08,52;UBERON:0000956,7.33e-08,21;UBERON:0001869,7.33e-08,21;UBERON:0000203,7.33e-08,21;UBERON:0010371,1.54e-07,73;UBERON:0000955,2.12e-07,47;UBERON:0006238,2.12e-07,47;UBERON:0002616,2.13e-07,46|phase1_expression=56.3723941808875,22.6834014965585,18.654968814971,39.9252758925016,33.5600139064053,63.2904855107825,69.1493416162756,52.0366993469552,35.1971805379167,45.6425826327887,65.0628279256919,66.1311198071339,47.2514014610128,51.1409354151135,70.6192695049205,66.6143629712527,99.3377866941968,43.6915099021159,49.2240816644602,55.1706547337439,52.8969264739654,86.8795823007746,124.853499208411,45.9178253417077,47.9465397430385,31.0085260622111,31.0148637234534,36.4146383239152,34.9643091799728,43.8532425782279,55.8760886851368,51.4374845502301,52.895571732273,47.5445043046316,84.3446729673722,80.7900376442273,75.1343231045518,34.7381253511633,48.4427913604756,37.6937095661135,23.5292595212406,30.7370468231301,30.1016418879315,53.6320444575959,55.4531813770745,64.6084567609119,61.8089162034951,122.748163042191,83.4807494390993,94.1040711519532,111.569178035414,96.314218124531,51.6770426657828,50.7753499407941,56.7998520550764,88.2399865603298,85.3869651017495,59.8179627041833,84.9729135610311,108.972141730039,96.9762047364454,86.7442002096978,98.7117223683365,43.6451362881479,33.6214563272771,48.3126478163348,59.6204219931625,66.8539851259505,90.6247211576095,97.0692696604856,108.738005018665,70.5557931477395,87.0222051349357,113.303989273832,123.544812142507,110.306254393203,72.6764814595965,82.996769755372,86.9412978230338,89.814561944262,94.5982234848916,99.4944537763411,89.3385596804419,92.8558306552272,77.4687116228427,85.4422897873636,91.1178757114259,88.1669378753672,68.9865621265307,81.4661417951148,31.0155002910795,35.2773789562368,20.3991400112325,32.9218946899068,29.8897152025928,24.1934519032561,34.549327352411,68.1721290312231,78.1955873854635,71.3745940510887,61.5485744424094,51.3305909657271,76.4415719119937,78.2173373468664,74.2564270668464,88.9293127817596,71.2789467470844,29.1168893283603,42.7247508017833,40.9700303818916,92.1207085128181,65.7645433154225,64.1111082371843,59.6861656588385,45.3892409543821,49.2613038012328,60.809962062656,26.3170829594239,60.1535175325915,52.7359930828554,44.6099867289995,56.2455293636858,55.9175283654366,36.5975996264434,31.4170060220183,42.4058711646262,47.9260498023681,89.9854096490111,60.866638767998,62.3129059924062,79.605104890441,78.0313526620888,74.7444576826789,84.3861009190091,75.6348482196799,71.0616732236778,74.2408962468806,45.532951243294,40.9410868662553,33.4602550859494,109.951774303485,102.766240681762,81.5681448018232,83.6411738988219,61.0967762378924,68.1564991915401,66.9967330602061,42.9447595426766,133.652155618362,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:56459 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9R1T2 | |||
|association_with_transcript=0bp_to_ENSMUST00000094815_5end | |||
|cluster_id=chr7:16973140..16973189,- | |||
|description=CAGE_peak_1_at_Sae1_5end | |||
|id=chr7:16973140..16973189,- | |||
|ontology_enrichment_celltype=CL:0002319!4.99e-13!43;CL:0000221!1.00e-12!44;CL:0000133!1.00e-12!44;CL:0000540!1.00e-11!33;CL:0000047!1.00e-11!33;CL:0000031!1.00e-11!33;CL:0000404!1.00e-11!33;CL:0000055!2.72e-11!50;CL:0000393!1.27e-10!39;CL:0000211!1.27e-10!39;CL:0000117!3.19e-08!23;CL:0000337!3.19e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.99e-13,43;CL:0000221,1.00e-12,44;CL:0000133,1.00e-12,44;CL:0000540,1.00e-11,33;CL:0000047,1.00e-11,33;CL:0000031,1.00e-11,33;CL:0000404,1.00e-11,33;CL:0000393,1.27e-10,39;CL:0000211,1.27e-10,39;CL:0000117,3.19e-08,23;CL:0000337,3.19e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.14e-14!75;UBERON:0001016!5.14e-14!75;UBERON:0001017!8.75e-14!73;UBERON:0005743!8.75e-14!73;UBERON:0002020!1.01e-10!34;UBERON:0004121!8.74e-10!102;UBERON:0000924!8.74e-10!102;UBERON:0006601!8.74e-10!102;UBERON:0002791!1.01e-09!29;UBERON:0003528!1.01e-09!29;UBERON:0001893!1.01e-09!29;UBERON:0002780!8.65e-09!39;UBERON:0001890!8.65e-09!39;UBERON:0006240!8.65e-09!39;UBERON:0003080!1.36e-08!40;UBERON:0003056!2.84e-08!49;UBERON:0001049!3.61e-08!52;UBERON:0005068!3.61e-08!52;UBERON:0006241!3.61e-08!52;UBERON:0007135!3.61e-08!52;UBERON:0002346!5.56e-08!71;UBERON:0003075!5.56e-08!71;UBERON:0007284!5.56e-08!71;UBERON:0000955!6.92e-08!50;UBERON:0006238!6.92e-08!50;UBERON:0002616!6.94e-08!49;UBERON:0000956!7.33e-08!21;UBERON:0001869!7.33e-08!21;UBERON:0000203!7.33e-08!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.14e-14,75;UBERON:0001017,8.75e-14,73;UBERON:0004121,6.77e-11,95;UBERON:0000924,6.77e-11,95;UBERON:0006601,6.77e-11,95;UBERON:0002020,1.01e-10,34;UBERON:0003528,1.01e-09,29;UBERON:0002791,1.01e-09,29;UBERON:0001893,1.01e-09,29;UBERON:0002346,2.79e-09,64;UBERON:0003075,2.79e-09,64;UBERON:0007284,2.79e-09,64;UBERON:0000073,6.18e-09,54;UBERON:0002780,8.65e-09,39;UBERON:0001890,8.65e-09,39;UBERON:0006240,8.65e-09,39;UBERON:0003080,1.36e-08,40;UBERON:0003056,2.84e-08,49;UBERON:0001049,3.61e-08,52;UBERON:0005068,3.61e-08,52;UBERON:0006241,3.61e-08,52;UBERON:0007135,3.61e-08,52;UBERON:0000956,7.33e-08,21;UBERON:0001869,7.33e-08,21;UBERON:0000203,7.33e-08,21;UBERON:0010371,1.54e-07,73;UBERON:0000955,2.12e-07,47;UBERON:0006238,2.12e-07,47;UBERON:0002616,2.13e-07,46 | |||
|phase1_expression=56.3723941808875,22.6834014965585,18.654968814971,39.9252758925016,33.5600139064053,63.2904855107825,69.1493416162756,52.0366993469552,35.1971805379167,45.6425826327887,65.0628279256919,66.1311198071339,47.2514014610128,51.1409354151135,70.6192695049205,66.6143629712527,99.3377866941968,43.6915099021159,49.2240816644602,55.1706547337439,52.8969264739654,86.8795823007746,124.853499208411,45.9178253417077,47.9465397430385,31.0085260622111,31.0148637234534,36.4146383239152,34.9643091799728,43.8532425782279,55.8760886851368,51.4374845502301,52.895571732273,47.5445043046316,84.3446729673722,80.7900376442273,75.1343231045518,34.7381253511633,48.4427913604756,37.6937095661135,23.5292595212406,30.7370468231301,30.1016418879315,53.6320444575959,55.4531813770745,64.6084567609119,61.8089162034951,122.748163042191,83.4807494390993,94.1040711519532,111.569178035414,96.314218124531,51.6770426657828,50.7753499407941,56.7998520550764,88.2399865603298,85.3869651017495,59.8179627041833,84.9729135610311,108.972141730039,96.9762047364454,86.7442002096978,98.7117223683365,43.6451362881479,33.6214563272771,48.3126478163348,59.6204219931625,66.8539851259505,90.6247211576095,97.0692696604856,108.738005018665,70.5557931477395,87.0222051349357,113.303989273832,123.544812142507,110.306254393203,72.6764814595965,82.996769755372,86.9412978230338,89.814561944262,94.5982234848916,99.4944537763411,89.3385596804419,92.8558306552272,77.4687116228427,85.4422897873636,91.1178757114259,88.1669378753672,68.9865621265307,81.4661417951148,31.0155002910795,35.2773789562368,20.3991400112325,32.9218946899068,29.8897152025928,24.1934519032561,34.549327352411,68.1721290312231,78.1955873854635,71.3745940510887,61.5485744424094,51.3305909657271,76.4415719119937,78.2173373468664,74.2564270668464,88.9293127817596,71.2789467470844,29.1168893283603,42.7247508017833,40.9700303818916,92.1207085128181,65.7645433154225,64.1111082371843,59.6861656588385,45.3892409543821,49.2613038012328,60.809962062656,26.3170829594239,60.1535175325915,52.7359930828554,44.6099867289995,56.2455293636858,55.9175283654366,36.5975996264434,31.4170060220183,42.4058711646262,47.9260498023681,89.9854096490111,60.866638767998,62.3129059924062,79.605104890441,78.0313526620888,74.7444576826789,84.3861009190091,75.6348482196799,71.0616732236778,74.2408962468806,45.532951243294,40.9410868662553,33.4602550859494,109.951774303485,102.766240681762,81.5681448018232,83.6411738988219,61.0967762378924,68.1564991915401,66.9967330602061,42.9447595426766,133.652155618362,102.30638937079,92.3743401860731,87.2399015061748,83.692222016905,59.8993726418126,62.1462051951989,102.502647411524,104.629764909672,84.1527656265119,63.3684603652172,89.4783337353368,89.5889549127787,87.1500377471312,79.7829758922159,81.0668634799304,76.9792893308017,67.4348439776183,67.3366237513044,46.2390755773991,64.5074611660843,50.7277464004404,35.8324138192682,42.1055963784957,48.3010253640311,41.4697833969549,63.5075644663664,71.5187056036027,27.755177770639,24.5939026997096,112.189619781533,106.828869055802,81.1865006329188,65.7488290272097,61.3763401011842,56.3067853293175,53.1472548929853,56.3270425156117,52.7803938480566,49.1422485941643,54.2000162191154,34.1551375288604,44.7405763240617,46.9973404880307,105.645020830866,105.908371189219,78.8954149711563,79.8313205153632,72.3442777135244,55.0566186139001,48.4391874371811,35.7216558110637,43.4886476120608,36.4021633569312,20.4552312690133,71.4097052464883,76.2648901039228,65.8845989287621,71.2039026073645,67.5296047306767,66.4573473149506,49.1960395040886,34.5348033030825,54.6377212244282,77.6348315247715,58.426128783955,51.7982537370171,47.9899868099512,49.8724809590916,23.1572890254416,36.2116252726545,124.306366121438,115.216238344512,110.673795925423,95.0495505568434,63.9873903427736,54.7500374037832,38.2461949801286,60.6895304808835,50.9368786192182,47.5175210599312,38.9994689023456,49.2152198317802,38.4766495826821,40.7136466636035,38.6173035511284,60.9787698543605,41.3905119457099,70.6422595946285,62.3566172670521,99.8363817343953,32.5687496093641,107.90381104036,105.418460960092,100.171879945751,121.874086955802,97.5858192480886,83.7906531134944,106.465214540497,102.289550268959,101.588958932257,67.7987977650013,48.9693293968527,100.429000468332,64.9918967820769,45.3667838174472,33.1862845849907,99.7828414596974,101.278391583192,51.3005816936043,54.9261520758237,49.8044939669162,42.6406683727565,63.6184026585635,64.1695281092498,34.1319698570681,52.7093042874994,33.0033738394198,39.4909942674394,100.834212657534,108.402577009948,87.0208362228265,63.4878036439339,62.2507173431226,65.325961179042,41.1027681304709,63.8307045933292,43.8492386688108,42.3414524265527,44.1895157883166,50.2154367024266,65.8617140215462,66.9678849857596,68.6108960934356,51.3006272468537,57.852694227279,58.0960994712699,81.3164259775097,72.0406711468178,66.1173284086465,57.9583525537147,63.1427758050002,58.3026014878924,58.91956142826,55.0035895741607,54.4162252268615,10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| |||
|short_description=p1@Sae1 | |||
}} |
Revision as of 16:17, 4 August 2015
Short description: | p1@Sae1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sae1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000094815_5end |
EntrezGene: | 56459 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.99e-13 | 43 |
ectodermal cell | 1.00e-12 | 44 |
neurectodermal cell | 1.00e-12 | 44 |
neuron | 1.00e-11 | 33 |
neuronal stem cell | 1.00e-11 | 33 |
neuroblast | 1.00e-11 | 33 |
electrically signaling cell | 1.00e-11 | 33 |
electrically responsive cell | 1.27e-10 | 39 |
electrically active cell | 1.27e-10 | 39 |
CNS neuron (sensu Vertebrata) | 3.19e-08 | 23 |
neuroblast (sensu Vertebrata) | 3.19e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.14e-14 | 75 |
central nervous system | 8.75e-14 | 73 |
ectoderm-derived structure | 6.77e-11 | 95 |
ectoderm | 6.77e-11 | 95 |
presumptive ectoderm | 6.77e-11 | 95 |
gray matter | 1.01e-10 | 34 |
brain grey matter | 1.01e-09 | 29 |
regional part of telencephalon | 1.01e-09 | 29 |
telencephalon | 1.01e-09 | 29 |
neurectoderm | 2.79e-09 | 64 |
neural plate | 2.79e-09 | 64 |
presumptive neural plate | 2.79e-09 | 64 |
regional part of nervous system | 6.18e-09 | 54 |
regional part of forebrain | 8.65e-09 | 39 |
forebrain | 8.65e-09 | 39 |
future forebrain | 8.65e-09 | 39 |
anterior neural tube | 1.36e-08 | 40 |
pre-chordal neural plate | 2.84e-08 | 49 |
neural tube | 3.61e-08 | 52 |
neural rod | 3.61e-08 | 52 |
future spinal cord | 3.61e-08 | 52 |
neural keel | 3.61e-08 | 52 |
cerebral cortex | 7.33e-08 | 21 |
cerebral hemisphere | 7.33e-08 | 21 |
pallium | 7.33e-08 | 21 |
ecto-epithelium | 1.54e-07 | 73 |
brain | 2.12e-07 | 47 |
future brain | 2.12e-07 | 47 |
regional part of brain | 2.13e-07 | 46 |