FFCP PHASE1:Mm9::chr4:119960301..119960359,-: Difference between revisions
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{{FFCP|EntrezGene=329934|HGNC=|UniProt=Q5RJI9,Q70KY4|association_with_transcript=-347bp_to_ENSMUST00000063846,ENSMUST00000102656_5end|description=CAGE_peak_1_at_Foxo6_5end|id=chr4:119960301..119960359,-|ontology_enrichment_celltype=CL:0000540!7.98e-10!33;CL:0000047!7.98e-10!33;CL:0000031!7.98e-10!33;CL:0000404!7.98e-10!33;CL:0000117!1.01e-09!23;CL:0000337!1.01e-09!23;CL:0002319!4.18e-07!43;CL:0000221!4.65e-07!44;CL:0000133!4.65e-07!44|ontology_enrichment_celltype_v019_2=CL:0000540,3.82e-10,33;CL:0000047,3.82e-10,33;CL:0000031,3.82e-10,33;CL:0000404,3.82e-10,33;CL:0000117,4.88e-10,23;CL:0000337,4.88e-10,23;CL:0002319,8.58e-07,43;CL:0000221,9.42e-07,44;CL:0000133,9.42e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.33e-18!73;UBERON:0005743!7.33e-18!73;UBERON:0004121!1.63e-17!102;UBERON:0000924!1.63e-17!102;UBERON:0006601!1.63e-17!102;UBERON:0003056!6.70e-17!49;UBERON:0000073!9.27e-17!75;UBERON:0001016!9.27e-17!75;UBERON:0003080!1.04e-16!40;UBERON:0002780!1.29e-16!39;UBERON:0001890!1.29e-16!39;UBERON:0006240!1.29e-16!39;UBERON:0001049!1.63e-16!52;UBERON:0005068!1.63e-16!52;UBERON:0006241!1.63e-16!52;UBERON:0007135!1.63e-16!52;UBERON:0002346!1.53e-15!71;UBERON:0003075!1.53e-15!71;UBERON:0007284!1.53e-15!71;UBERON:0000033!2.28e-15!63;UBERON:0002616!1.01e-14!49;UBERON:0000955!1.60e-14!50;UBERON:0006238!1.60e-14!50;UBERON:0002020!9.08e-14!34;UBERON:0002791!3.64e-12!29;UBERON:0003528!3.64e-12!29;UBERON:0001893!3.64e-12!29;UBERON:0000956!7.07e-09!21;UBERON:0001869!7.07e-09!21;UBERON:0000203!7.07e-09!21|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.43e-18,95;UBERON:0000924,1.43e-18,95;UBERON:0006601,1.43e-18,95;UBERON:0001017,8.25e-18,73;UBERON:0003056,2.70e-17,49;UBERON:0002346,3.62e-17,64;UBERON:0003075,3.62e-17,64;UBERON:0007284,3.62e-17,64;UBERON:0010371,4.10e-17,73;UBERON:0003080,4.43e-17,40;UBERON:0002780,5.58e-17,39;UBERON:0001890,5.58e-17,39;UBERON:0006240,5.58e-17,39;UBERON:0001016,2.09e-16,75;UBERON:0001049,2.41e-16,52;UBERON:0005068,2.41e-16,52;UBERON:0006241,2.41e-16,52;UBERON:0007135,2.41e-16,52;UBERON:0000073,2.66e-16,54;UBERON:0002616,7.30e-15,46;UBERON:0000955,1.20e-14,47;UBERON:0006238,1.20e-14,47;UBERON:0002020,4.95e-14,34;UBERON:0010314,3.40e-13,92;UBERON:0003528,2.29e-12,29;UBERON:0002791,2.29e-12,29;UBERON:0001893,2.29e-12,29;UBERON:0000956,5.88e-09,21;UBERON:0001869,5.88e-09,21;UBERON:0000203,5.88e-09,21|phase1_expression=1.92178616525753,17.7977457896074,12.739978702907,9.37639055051173,8.01433167914156,1.17515490338323,1.16806320297763,0,0.422366166455,0,0,0.0797721589953364,0,0,0,0,0,0,0.137114433605739,0.42438965179803,3.48677489619386,0,0,0.95995453676044,1.14704640533585,10.3361753540704,5.1691439539089,3.44753972297422,6.46079626151671,6.30075324399827,2.43903561720835,0,0,0,1.44425809875637,2.49351968037739,1.02084678131185,0,0,0,0,0,0.485510353031154,0.503587271902309,0.709638518536602,0,0.782391344348039,5.66865406589161,0.439372365468944,0.194429899074283,1.81982348112971,1.43752564364972,0.167782606057736,0,0,0,0,0.515672092277442,10.7227724255587,14.8117474196169,9.50747105259269,0.677689064138264,0.889294796111139,0.449949858640699,0,0,2.39680088414724,3.84218305321555,57.962493280439,55.6224465926566,58.890989178387,4.57041575046086,7.28866185140325,25.4780862367104,23.4821403994679,24.8189072384706,1.10115880999389,3.44755812830007,3.5329502648936,8.17694983927202,9.69769022185542,10.939180781692,2.79182999001381,5.6276261003168,8.70950012327818,4.71405736757868,5.69486723196412,7.45597783301202,0.37863096666592,0.529000920747499,1.15945795480671,0,0,0,0,0.448026887097336,2.80888840263504,0.170430322578058,0.259786004602869,0.35333957451034,2.53518155598025,0,0,0,0,0.253359865475099,0.505524445014783,1.1418387971906,0,1.03909497345377,1.38788261412909,2.74018930480927,1.61430848079241,1.65794904607885,2.70454026412121,1.0053327306374,3.46072954828123,2.31358971071859,0,2.26473589926373,2.65009822152472,0.484875253135222,0,0.878342391034642,1.8850203613211,4.08731288333746,0.239630249011841,0.599902730993408,0.127070227073065,4.04434726393021,9.60751265919116,38.1989230423108,7.30062144807561,9.46147192122223,7.48036960414416,10.2211995732687,4.48093200941392,0.746441823660558,0.505445516867349,4.8401626853889,1.30120442962704,2.98872735763515,2.34080768746954,2.56198190320716,5.23881043465224,6.66191345481219,8.90166383317424,1.81092359517311,0.862271971731369,0.567318240503458,1.05570674498369,1.53437012699302,2.22437799380478,1.39300866608867,2.26360350048738,3.38358253591438,0,0,0,2.07125772535502,1.87620847984877,1.44049649168812,3.31442629819294,0.787056926989615,1.23413690309903,0.930135779001631,1.87791380979733,1.5179494507732,2.30383789878873,4.59668899421467,6.32336714457675,5.84799949701329,6.36695334344047,3.75777972529041,23.9730541363105,39.3095619288867,3.96502539580558,0.264450566663544,1.06644125267617,1.62565670302307,2.06187938115349,1.61346819698674,1.33426826306922,2.09248188723815,6.168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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:329934 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q5RJI9,uniprot:Q70KY4 | |||
|association_with_transcript=-347bp_to_ENSMUST00000063846,ENSMUST00000102656_5end | |||
|cluster_id=chr4:119960301..119960359,- | |||
|description=CAGE_peak_1_at_Foxo6_5end | |||
|id=chr4:119960301..119960359,- | |||
|ontology_enrichment_celltype=CL:0000540!7.98e-10!33;CL:0000047!7.98e-10!33;CL:0000031!7.98e-10!33;CL:0000404!7.98e-10!33;CL:0000117!1.01e-09!23;CL:0000337!1.01e-09!23;CL:0002319!4.18e-07!43;CL:0000221!4.65e-07!44;CL:0000133!4.65e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.82e-10,33;CL:0000047,3.82e-10,33;CL:0000031,3.82e-10,33;CL:0000404,3.82e-10,33;CL:0000117,4.88e-10,23;CL:0000337,4.88e-10,23;CL:0002319,8.58e-07,43;CL:0000221,9.42e-07,44;CL:0000133,9.42e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.33e-18!73;UBERON:0005743!7.33e-18!73;UBERON:0004121!1.63e-17!102;UBERON:0000924!1.63e-17!102;UBERON:0006601!1.63e-17!102;UBERON:0003056!6.70e-17!49;UBERON:0000073!9.27e-17!75;UBERON:0001016!9.27e-17!75;UBERON:0003080!1.04e-16!40;UBERON:0002780!1.29e-16!39;UBERON:0001890!1.29e-16!39;UBERON:0006240!1.29e-16!39;UBERON:0001049!1.63e-16!52;UBERON:0005068!1.63e-16!52;UBERON:0006241!1.63e-16!52;UBERON:0007135!1.63e-16!52;UBERON:0002346!1.53e-15!71;UBERON:0003075!1.53e-15!71;UBERON:0007284!1.53e-15!71;UBERON:0000033!2.28e-15!63;UBERON:0002616!1.01e-14!49;UBERON:0000955!1.60e-14!50;UBERON:0006238!1.60e-14!50;UBERON:0002020!9.08e-14!34;UBERON:0002791!3.64e-12!29;UBERON:0003528!3.64e-12!29;UBERON:0001893!3.64e-12!29;UBERON:0000956!7.07e-09!21;UBERON:0001869!7.07e-09!21;UBERON:0000203!7.07e-09!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.43e-18,95;UBERON:0000924,1.43e-18,95;UBERON:0006601,1.43e-18,95;UBERON:0001017,8.25e-18,73;UBERON:0003056,2.70e-17,49;UBERON:0002346,3.62e-17,64;UBERON:0003075,3.62e-17,64;UBERON:0007284,3.62e-17,64;UBERON:0010371,4.10e-17,73;UBERON:0003080,4.43e-17,40;UBERON:0002780,5.58e-17,39;UBERON:0001890,5.58e-17,39;UBERON:0006240,5.58e-17,39;UBERON:0001016,2.09e-16,75;UBERON:0001049,2.41e-16,52;UBERON:0005068,2.41e-16,52;UBERON:0006241,2.41e-16,52;UBERON:0007135,2.41e-16,52;UBERON:0000073,2.66e-16,54;UBERON:0002616,7.30e-15,46;UBERON:0000955,1.20e-14,47;UBERON:0006238,1.20e-14,47;UBERON:0002020,4.95e-14,34;UBERON:0010314,3.40e-13,92;UBERON:0003528,2.29e-12,29;UBERON:0002791,2.29e-12,29;UBERON:0001893,2.29e-12,29;UBERON:0000956,5.88e-09,21;UBERON:0001869,5.88e-09,21;UBERON:0000203,5.88e-09,21 | |||
|phase1_expression=1.92178616525753,17.7977457896074,12.739978702907,9.37639055051173,8.01433167914156,1.17515490338323,1.16806320297763,0,0.422366166455,0,0,0.0797721589953364,0,0,0,0,0,0,0.137114433605739,0.42438965179803,3.48677489619386,0,0,0.95995453676044,1.14704640533585,10.3361753540704,5.1691439539089,3.44753972297422,6.46079626151671,6.30075324399827,2.43903561720835,0,0,0,1.44425809875637,2.49351968037739,1.02084678131185,0,0,0,0,0,0.485510353031154,0.503587271902309,0.709638518536602,0,0.782391344348039,5.66865406589161,0.439372365468944,0.194429899074283,1.81982348112971,1.43752564364972,0.167782606057736,0,0,0,0,0.515672092277442,10.7227724255587,14.8117474196169,9.50747105259269,0.677689064138264,0.889294796111139,0.449949858640699,0,0,2.39680088414724,3.84218305321555,57.962493280439,55.6224465926566,58.890989178387,4.57041575046086,7.28866185140325,25.4780862367104,23.4821403994679,24.8189072384706,1.10115880999389,3.44755812830007,3.5329502648936,8.17694983927202,9.69769022185542,10.939180781692,2.79182999001381,5.6276261003168,8.70950012327818,4.71405736757868,5.69486723196412,7.45597783301202,0.37863096666592,0.529000920747499,1.15945795480671,0,0,0,0,0.448026887097336,2.80888840263504,0.170430322578058,0.259786004602869,0.35333957451034,2.53518155598025,0,0,0,0,0.253359865475099,0.505524445014783,1.1418387971906,0,1.03909497345377,1.38788261412909,2.74018930480927,1.61430848079241,1.65794904607885,2.70454026412121,1.0053327306374,3.46072954828123,2.31358971071859,0,2.26473589926373,2.65009822152472,0.484875253135222,0,0.878342391034642,1.8850203613211,4.08731288333746,0.239630249011841,0.599902730993408,0.127070227073065,4.04434726393021,9.60751265919116,38.1989230423108,7.30062144807561,9.46147192122223,7.48036960414416,10.2211995732687,4.48093200941392,0.746441823660558,0.505445516867349,4.8401626853889,1.30120442962704,2.98872735763515,2.34080768746954,2.56198190320716,5.23881043465224,6.66191345481219,8.90166383317424,1.81092359517311,0.862271971731369,0.567318240503458,1.05570674498369,1.53437012699302,2.22437799380478,1.39300866608867,2.26360350048738,3.38358253591438,0,0,0,2.07125772535502,1.87620847984877,1.44049649168812,3.31442629819294,0.787056926989615,1.23413690309903,0.930135779001631,1.87791380979733,1.5179494507732,2.30383789878873,4.59668899421467,6.32336714457675,5.84799949701329,6.36695334344047,3.75777972529041,23.9730541363105,39.3095619288867,3.96502539580558,0.264450566663544,1.06644125267617,1.62565670302307,2.06187938115349,1.61346819698674,1.33426826306922,2.09248188723815,6.16887780007865,2.79988223030818,3.01602250560323,1.98956472041151,1.75467678407208,6.29173586057955,3.45820879799511,3.18626037206988,0.948339504765408,0.913988100877831,1.1270773567308,0.407302655690628,0.581857461502877,1.47285221769669,0.758838445491087,0.147610147979602,0.470996183524124,0.246794327843601,0,0.667380422864376,0,0.224862112384854,0.202860121388503,0,0.50925170356284,0.287696137450811,0.486405680325106,0,0,1.11642284300551,0,0,0.179397413521912,0,2.40179147216586,1.89491411770485,1.95557971730431,0.169745085775188,1.64283173801951,1.50755631697634,0.476087281772027,1.56106918286239,0.945810864637146,1.55025282754142,1.43509291791738,0.983179888294428,3.28101465545202,2.02508682014116,0,0,0,0.275936746304732,2.56880943980467,2.57865710502847,0.819674726883377,3.02965112645248,2.2085575359138,2.73307121007647,6.46270193198397,1.19484398976276,4.01037613348309,4.24614796183249,4.45291771842384,4.38383786866968,4.74345333535828,2.24924921495265,5.39372323791421,8.01295216502649,8.30723492703238,3.46437258242324,5.30980553359851,3.15614827001476,1.51161778482376,0.754420319023592,2.36241514304618,2.76691633149535,1.29214146584111,2.90826983582004,2.49548164869305,3.16036757935816,4.21674434299995,8.25084345985495,11.5749465956288,3.24109969256358,6.07985813778946,7.28745919107414,13.6551979904551,8.56170324489939,7.89835298890181,12.4830629136986,0.23467170806371,0.42366414172764,0.220528398054962,2.63818004706368,6.62004149453213,7.05661221659424,6.32673423216623,6.89391778929257,4.66369338607761,1.66882771809459,0,2.68302928352189,0.925972636848558,0,0,0,1.18984900995699,1.11961161858926,1.79659965945751,3.81868247206045,2.84702394223022,4.06638934253697,1.08005340821801,1.25452977608681,1.52853794622324,2.96701562046606,2.89287095038676,2.35580347785627,0.777689839750757,3.72803587852155,3.94585057078933,5.98066184175915,9.43113395605456,15.7505462558679,16.1449779347164,18.4162176784948,18.5424437060291,31.249052362548,16.9872137969652,3.8653459332161,2.88030006257865,0,0.810900861160657,0.308132871494482,0,0.179026695667481,0.198681354781265,0.240390899039938,0,0.302899349844443,0,0,0,0,0,6.34845074122592,0,0.179427713218951,0,1.9318959403219,2.25218970541418,1.28206136987086,3.00115730710692,0,15.2482997506608,11.5081309126794,6.87474616127276,10.4830441229649,4.7955776383945,3.0215755895588,6.07520250208625,5.85417564191487,11.7817026335893,8.80192529978094,1.14166082342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| |||
|short_description=p1@Foxo6 | |||
}} |
Revision as of 16:26, 4 August 2015
Short description: | p1@Foxo6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Foxo6_5end |
Coexpression cluster: | NA |
Association with transcript: | -347bp_to_ENSMUST00000063846, ENSMUST00000102656_5end |
EntrezGene: | 329934 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.82e-10 | 33 |
neuronal stem cell | 3.82e-10 | 33 |
neuroblast | 3.82e-10 | 33 |
electrically signaling cell | 3.82e-10 | 33 |
CNS neuron (sensu Vertebrata) | 4.88e-10 | 23 |
neuroblast (sensu Vertebrata) | 4.88e-10 | 23 |
neural cell | 8.58e-07 | 43 |
ectodermal cell | 9.42e-07 | 44 |
neurectodermal cell | 9.42e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.43e-18 | 95 |
ectoderm | 1.43e-18 | 95 |
presumptive ectoderm | 1.43e-18 | 95 |
central nervous system | 8.25e-18 | 73 |
pre-chordal neural plate | 2.70e-17 | 49 |
neurectoderm | 3.62e-17 | 64 |
neural plate | 3.62e-17 | 64 |
presumptive neural plate | 3.62e-17 | 64 |
ecto-epithelium | 4.10e-17 | 73 |
anterior neural tube | 4.43e-17 | 40 |
regional part of forebrain | 5.58e-17 | 39 |
forebrain | 5.58e-17 | 39 |
future forebrain | 5.58e-17 | 39 |
nervous system | 2.09e-16 | 75 |
neural tube | 2.41e-16 | 52 |
neural rod | 2.41e-16 | 52 |
future spinal cord | 2.41e-16 | 52 |
neural keel | 2.41e-16 | 52 |
regional part of nervous system | 2.66e-16 | 54 |
regional part of brain | 7.30e-15 | 46 |
brain | 1.20e-14 | 47 |
future brain | 1.20e-14 | 47 |
gray matter | 4.95e-14 | 34 |
structure with developmental contribution from neural crest | 3.40e-13 | 92 |
brain grey matter | 2.29e-12 | 29 |
regional part of telencephalon | 2.29e-12 | 29 |
telencephalon | 2.29e-12 | 29 |
cerebral cortex | 5.88e-09 | 21 |
cerebral hemisphere | 5.88e-09 | 21 |
pallium | 5.88e-09 | 21 |