Personal tools

FFCP PHASE1:Mm9::chr6:108610474..108610491,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=20893|HGNC=|MCL_coexpression_id=34|UniProt=O35185,Q542A5|association_with_transcript=-131bp_to_ENSMUST00000032194,NM_011498,uc009ddn.1_5end|description=CAGE_peak_5_at_Bhlhe40_5end|id=chr6:108610474..108610491,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,5.08e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!2.05e-07!50;UBERON:0006238!2.05e-07!50;UBERON:0002616!5.69e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.31e-12,54;UBERON:0000955,7.83e-12,47;UBERON:0006238,7.83e-12,47;UBERON:0001017,6.04e-11,73;UBERON:0002616,1.01e-10,46;UBERON:0001016,1.69e-10,75;UBERON:0001049,3.86e-10,52;UBERON:0005068,3.86e-10,52;UBERON:0006241,3.86e-10,52;UBERON:0007135,3.86e-10,52;UBERON:0002346,1.82e-09,64;UBERON:0003075,1.82e-09,64;UBERON:0007284,1.82e-09,64;UBERON:0004121,7.99e-09,95;UBERON:0000924,7.99e-09,95;UBERON:0006601,7.99e-09,95;UBERON:0002950,2.89e-08,4;UBERON:0001891,2.89e-08,4;UBERON:0009616,2.89e-08,4;UBERON:0010286,2.89e-08,4;UBERON:0010371,1.07e-07,73;UBERON:0003056,2.15e-07,49;UBERON:0003080,2.41e-07,40;UBERON:0004684,5.08e-07,3;UBERON:0002275,5.08e-07,3|phase1_expression=0,0.697950815278722,0.454999239389536,0.60492842261366,0.500895729946347,0,0.934450562382103,0.258246646883153,1.40788722151667,1.87251621057595,0.34243593645101,0.239316476986009,0.171200729931206,0,0,0.202475267389826,0,0.630924330716475,0.274228867211478,0,0.595303031057488,0.496454756004426,0.261199789138935,0.47997726838022,0.22940928106717,0,0.430761996159075,0.215471232685889,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0,0.498703936075477,0,0.418531630736908,0,1.0470474879476,0.588231488031014,0,0,0,0.101376931219515,0,0.782391344348039,0.218025156380447,0,0.972149495371417,0.419959264876088,1.43752564364972,1.8456086666351,0,0,0.514518872071894,0,0.515672092277442,0,0.528990979272033,0,0.338844532069132,0,0.449949858640699,0.988866362566974,0,0.299600110518405,0,0.103689612308478,0,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,2.20231761998777,1.27687338085188,1.53606533256243,0.263772575460388,0.274462930807229,0,1.11673199600552,1.12552522006336,1.22238598221448,0.589257170947335,0.284743361598206,0.372798891650601,0.302904773332736,0.151143120213571,0.869593466105033,0,2.03991400112325,0.539703191637817,0.649776417447669,0,0.561777680527007,0,0,0,0.422530259330042,0,0,0,0.432982082022428,0,0,0.45673551887624,0.258937883647172,0.890652834388949,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0,0.502666365318702,0,0.433798070759735,0,0.970601099684455,0.441683036920787,0,0,2.63502717310392,1.04723353406728,0.255457055208591,3.11519323715393,0.599902730993408,1.39777249780371,2.54644086988199,2.74500361691176,0.125654352112864,2.08589184230732,1.02286182932132,2.70124457927428,1.1356888414743,0.101839363850316,0.373220911830279,0,1.05220927943237,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,1.81092359517311,0,0,0.175951124163949,0,0.278047249225598,0,0.411564272815887,0,2.1066395619397,1.02939162845886,0.852490498186778,0.207125772535502,0.234526059981096,0.36012412292203,0.710234206755631,0.196764231747404,0.308534225774757,1.16266972375204,0.268273401399619,0.350296027101508,0.987359099480883,0.32833492815819,0.243206428637567,0.146199987425332,0.219550115291051,0.402619256281115,0.841159794256509,0.102904612379284,0.330418782983798,0.264450566663544,0.213288250535234,0.232236671860439,0,0.80673409849337,0,0.760902504450237,0,0,0.754005626400808,0.198956472041151,0,0.898819408654221,0.216138049874694,0.398282546508734,0.379335801906163,0,0,0.610953983535943,0.387904974335251,0.210407459670956,0.822074982615345,0.590440591918409,0.470996183524124,0.370191491765402,0.592905254174298,0.166845105716094,0,0,0,0.241177159752417,0,0,0.324270453550071,0,1.43768206527355,0,0,0.252578877947112,0,0.964887042726734,0.554259570499814,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0.518054945597687,0.144649058581512,0,0,0,0.275936746304732,1.44495530989013,1.52375192569864,0,0.504941854408746,0,0,0,0.238968797952552,0,0.566153061577665,0.809621403349789,0,0,1.60660658210904,0.283880170416537,0.178065603667255,0.162886959353576,0.659880491890142,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,1.06404140185364,0.178368817602071,0.164549020602121,0.913394847343798,0.704015124191131,0.847328283455281,0,0.32977250588296,0.161464426695906,0.0603129249281559,0.238744688006273,0,0,1.11255181206306,0.170870880797853,0,0.370389054739423,0,0.136694227721025,0.228778173206523,4.75939603982795,5.45810664062266,4.56059913554598,0.954670618015114,0.158167996790568,0,0.108005340821801,0.418176592028937,0,0.134864346384821,0.0826534557253359,0,0.259229946583586,0,0,0.598066184175915,0.165458490457098,0,0.387479470433193,0,0.352071715937262,0.13020438484395,0.209718688851422,0.241584120826006,0,0,0,0.616265742988964,0,0.358053391334963,0.596044064343795,0,0.295379054349154,0.302899349844443,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0.116876902181569,0.226730383615211,0.665957860122194,0.358855426437903,0.503653849092235,0.386379188064381,0.563047426353546,0.549454872801795,0.428736758158132,0.501572104035363,1.6942555278512,0.920650473014354,1.71868654031819,0.859265911718438,0.685082519770642,1.5107877947794,3.37511250115903,0.45032120322422,0.453142408984205,1.55328093525546,0.103787347584177,0.399024873401031,0.170733605754134,0,0.419226325255965,0,0.222246727801615,0.206035057238894,0,1.01078884705519,0,0.377252682772152,0.37456602987953,0.448176066834085,0.229741875822453,0.476293691283074,0.579421629724277,0,0.412085900803307,0.147198920134397,1.37147700954166,0.532427418478012,0.238436189947321,0.145346416632329,0.564656282491984,0.169229215783353,0,0,0.271608227691724,1.68342681497322,0.474540072496697,0.29551344712669,0,0.154936841185966,0.385813221962283,0.499621155875892,0,0.214871054048298,0.57386499620653,0.661774257358546,0.231867835620421|short_description=p5@Bhlhe40}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:20893
|HGNC=
|MCL_coexpression_id=34
|TSSclassifier=NA
|UniProt=uniprot:O35185,uniprot:Q542A5
|association_with_transcript=-131bp_to_ENSMUST00000032194,NM_011498,uc009ddn.1_5end
|cluster_id=chr6:108610474..108610491,+
|description=CAGE_peak_5_at_Bhlhe40_5end
|id=chr6:108610474..108610491,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002610,5.08e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!2.05e-07!50;UBERON:0006238!2.05e-07!50;UBERON:0002616!5.69e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.31e-12,54;UBERON:0000955,7.83e-12,47;UBERON:0006238,7.83e-12,47;UBERON:0001017,6.04e-11,73;UBERON:0002616,1.01e-10,46;UBERON:0001016,1.69e-10,75;UBERON:0001049,3.86e-10,52;UBERON:0005068,3.86e-10,52;UBERON:0006241,3.86e-10,52;UBERON:0007135,3.86e-10,52;UBERON:0002346,1.82e-09,64;UBERON:0003075,1.82e-09,64;UBERON:0007284,1.82e-09,64;UBERON:0004121,7.99e-09,95;UBERON:0000924,7.99e-09,95;UBERON:0006601,7.99e-09,95;UBERON:0002950,2.89e-08,4;UBERON:0001891,2.89e-08,4;UBERON:0009616,2.89e-08,4;UBERON:0010286,2.89e-08,4;UBERON:0010371,1.07e-07,73;UBERON:0003056,2.15e-07,49;UBERON:0003080,2.41e-07,40;UBERON:0004684,5.08e-07,3;UBERON:0002275,5.08e-07,3
|phase1_expression=0,0.697950815278722,0.454999239389536,0.60492842261366,0.500895729946347,0,0.934450562382103,0.258246646883153,1.40788722151667,1.87251621057595,0.34243593645101,0.239316476986009,0.171200729931206,0,0,0.202475267389826,0,0.630924330716475,0.274228867211478,0,0.595303031057488,0.496454756004426,0.261199789138935,0.47997726838022,0.22940928106717,0,0.430761996159075,0.215471232685889,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0,0.498703936075477,0,0.418531630736908,0,1.0470474879476,0.588231488031014,0,0,0,0.101376931219515,0,0.782391344348039,0.218025156380447,0,0.972149495371417,0.419959264876088,1.43752564364972,1.8456086666351,0,0,0.514518872071894,0,0.515672092277442,0,0.528990979272033,0,0.338844532069132,0,0.449949858640699,0.988866362566974,0,0.299600110518405,0,0.103689612308478,0,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,2.20231761998777,1.27687338085188,1.53606533256243,0.263772575460388,0.274462930807229,0,1.11673199600552,1.12552522006336,1.22238598221448,0.589257170947335,0.284743361598206,0.372798891650601,0.302904773332736,0.151143120213571,0.869593466105033,0,2.03991400112325,0.539703191637817,0.649776417447669,0,0.561777680527007,0,0,0,0.422530259330042,0,0,0,0.432982082022428,0,0,0.45673551887624,0.258937883647172,0.890652834388949,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0,0.502666365318702,0,0.433798070759735,0,0.970601099684455,0.441683036920787,0,0,2.63502717310392,1.04723353406728,0.255457055208591,3.11519323715393,0.599902730993408,1.39777249780371,2.54644086988199,2.74500361691176,0.125654352112864,2.08589184230732,1.02286182932132,2.70124457927428,1.1356888414743,0.101839363850316,0.373220911830279,0,1.05220927943237,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,1.81092359517311,0,0,0.175951124163949,0,0.278047249225598,0,0.411564272815887,0,2.1066395619397,1.02939162845886,0.852490498186778,0.207125772535502,0.234526059981096,0.36012412292203,0.710234206755631,0.196764231747404,0.308534225774757,1.16266972375204,0.268273401399619,0.350296027101508,0.987359099480883,0.32833492815819,0.243206428637567,0.146199987425332,0.219550115291051,0.402619256281115,0.841159794256509,0.102904612379284,0.330418782983798,0.264450566663544,0.213288250535234,0.232236671860439,0,0.80673409849337,0,0.760902504450237,0,0,0.754005626400808,0.198956472041151,0,0.898819408654221,0.216138049874694,0.398282546508734,0.379335801906163,0,0,0.610953983535943,0.387904974335251,0.210407459670956,0.822074982615345,0.590440591918409,0.470996183524124,0.370191491765402,0.592905254174298,0.166845105716094,0,0,0,0.241177159752417,0,0,0.324270453550071,0,1.43768206527355,0,0,0.252578877947112,0,0.964887042726734,0.554259570499814,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0.518054945597687,0.144649058581512,0,0,0,0.275936746304732,1.44495530989013,1.52375192569864,0,0.504941854408746,0,0,0,0.238968797952552,0,0.566153061577665,0.809621403349789,0,0,1.60660658210904,0.283880170416537,0.178065603667255,0.162886959353576,0.659880491890142,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,1.06404140185364,0.178368817602071,0.164549020602121,0.913394847343798,0.704015124191131,0.847328283455281,0,0.32977250588296,0.161464426695906,0.0603129249281559,0.238744688006273,0,0,1.11255181206306,0.170870880797853,0,0.370389054739423,0,0.136694227721025,0.228778173206523,4.75939603982795,5.45810664062266,4.56059913554598,0.954670618015114,0.158167996790568,0,0.108005340821801,0.418176592028937,0,0.134864346384821,0.0826534557253359,0,0.259229946583586,0,0,0.598066184175915,0.165458490457098,0,0.387479470433193,0,0.352071715937262,0.13020438484395,0.209718688851422,0.241584120826006,0,0,0,0.616265742988964,0,0.358053391334963,0.596044064343795,0,0.295379054349154,0.302899349844443,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0.116876902181569,0.226730383615211,0.665957860122194,0.358855426437903,0.503653849092235,0.386379188064381,0.563047426353546,0.549454872801795,0.428736758158132,0.501572104035363,1.6942555278512,0.920650473014354,1.71868654031819,0.859265911718438,0.685082519770642,1.5107877947794,3.37511250115903,0.45032120322422,0.453142408984205,1.55328093525546,0.103787347584177,0.399024873401031,0.170733605754134,0,0.419226325255965,0,0.222246727801615,0.206035057238894,0,1.01078884705519,0,0.377252682772152,0.37456602987953,0.448176066834085,0.229741875822453,0.476293691283074,0.579421629724277,0,0.412085900803307,0.147198920134397,1.37147700954166,0.532427418478012,0.238436189947321,0.145346416632329,0.564656282491984,0.169229215783353,0,0,0.271608227691724,1.68342681497322,0.474540072496697,0.29551344712669,0,0.154936841185966,0.385813221962283,0.499621155875892,0,0.214871054048298,0.57386499620653,0.661774257358546,0.231867835620421
|short_description=p5@Bhlhe40
}}

Revision as of 21:13, 4 August 2015

Short description:p5@Bhlhe40
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Bhlhe40_5end
Coexpression cluster:MCL_coexpression_mm9:34
Association with transcript: -131bp_to_ENSMUST00000032194, NM_011498, uc009ddn.1_5end
EntrezGene:20893
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Bhlhe40

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.56
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
raphe nuclei neuron5.08e-073

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.31e-1254
brain7.83e-1247
future brain7.83e-1247
central nervous system6.04e-1173
regional part of brain1.01e-1046
nervous system1.69e-1075
neural tube3.86e-1052
neural rod3.86e-1052
future spinal cord3.86e-1052
neural keel3.86e-1052
neurectoderm1.82e-0964
neural plate1.82e-0964
presumptive neural plate1.82e-0964
ectoderm-derived structure7.99e-0995
ectoderm7.99e-0995
presumptive ectoderm7.99e-0995
regional part of midbrain2.89e-084
midbrain2.89e-084
presumptive midbrain2.89e-084
midbrain neural tube2.89e-084
ecto-epithelium1.07e-0773
pre-chordal neural plate2.15e-0749
anterior neural tube2.41e-0740
raphe nuclei5.08e-073
reticular formation5.08e-073
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:108610474..108610491,%2B&oldid=3822707"