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FFCP PHASE1:Mm9::chr10:84380402..84380437,+: Difference between revisions

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{{FFCP|EntrezGene=237422|HGNC=|MCL_coexpression_id=2594|UniProt=Q80XE1|association_with_transcript=1bp_to_NM_001013441_5end|description=CAGE_peak_3_at_Ric8b_5end|id=chr10:84380402..84380437,+|ontology_enrichment_celltype=CL:0000117!4.56e-07!23;CL:0000337!4.56e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,9.45e-07,23;CL:0000337,9.45e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.48e-13!52;UBERON:0005068!5.48e-13!52;UBERON:0006241!5.48e-13!52;UBERON:0007135!5.48e-13!52;UBERON:0000955!1.15e-11!50;UBERON:0006238!1.15e-11!50;UBERON:0000033!2.00e-11!63;UBERON:0002616!3.27e-11!49;UBERON:0001017!9.59e-11!73;UBERON:0005743!9.59e-11!73;UBERON:0003080!6.18e-10!40;UBERON:0000073!1.11e-09!75;UBERON:0001016!1.11e-09!75;UBERON:0002346!1.12e-09!71;UBERON:0003075!1.12e-09!71;UBERON:0007284!1.12e-09!71;UBERON:0002780!1.52e-09!39;UBERON:0001890!1.52e-09!39;UBERON:0006240!1.52e-09!39;UBERON:0003056!3.44e-09!49;UBERON:0000153!7.98e-08!94;UBERON:0004121!1.79e-07!102;UBERON:0000924!1.79e-07!102;UBERON:0006601!1.79e-07!102;UBERON:0007811!2.93e-07!86;UBERON:0002020!4.82e-07!34;UBERON:0001894!8.73e-07!10;UBERON:0006222!8.73e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.65e-13,54;UBERON:0001049,1.11e-12,52;UBERON:0005068,1.11e-12,52;UBERON:0006241,1.11e-12,52;UBERON:0007135,1.11e-12,52;UBERON:0002346,5.73e-11,64;UBERON:0003075,5.73e-11,64;UBERON:0007284,5.73e-11,64;UBERON:0001017,9.20e-11,73;UBERON:0000955,2.98e-10,47;UBERON:0006238,2.98e-10,47;UBERON:0010371,4.46e-10,73;UBERON:0002616,8.46e-10,46;UBERON:0001016,8.99e-10,75;UBERON:0003080,1.96e-09,40;UBERON:0002780,4.90e-09,39;UBERON:0001890,4.90e-09,39;UBERON:0006240,4.90e-09,39;UBERON:0003056,1.46e-08,49;UBERON:0004121,2.59e-08,95;UBERON:0000924,2.59e-08,95;UBERON:0006601,2.59e-08,95;UBERON:0001894,5.04e-07,10;UBERON:0006222,5.04e-07,10|phase1_expression=3.36312578920067,2.44282785347553,1.36499771816861,1.81478526784098,3.50627010962443,1.6787927191189,0.700837921786577,1.80772652818207,2.53419699873,4.44722600011788,0.856089841127525,0.638177271962691,1.19840510951844,0.786783621770977,0.333109761815663,0.404950534779652,0,0.315462165358238,0,0.84877930359606,2.12608225377674,0.595745707205312,1.30599894569468,0.639969691173627,1.37645568640302,0.57423196411502,2.15380998079537,1.939241094173,0.570070258369122,0.504060259519861,0.443461021310609,1.90509202037889,1.23012957516914,0,2.59966457776147,1.32987716286794,0.816677425049476,2.92972141515835,1.5626706890476,1.57057123192139,2.35292595212406,0.683045484958446,1.94204141212461,1.6366586336825,1.82478476195126,2.56965453026354,0.782391344348039,0,0.439372365468944,0.972149495371417,0.279972843250725,0,2.01339127269284,2.17608642603403,2.68875039313971,0.257259436035947,0,1.03134418455488,3.64169629547276,3.70293685490423,3.80298842103708,0,0,0,0,0,0,0.384218305321555,0.829516898467821,0.810035629990144,0.841299845405528,2.28520787523043,3.09215957332259,2.57230678351403,3.45043695665651,1.83843757322004,2.20231761998777,2.68143409978894,3.22573719838111,2.90149833006426,5.76372154695181,9.37644067002168,1.67509799400829,1.68828783009504,4.27835093775068,4.41942878210502,4.8406371471695,7.08317894136142,0.37863096666592,0.377857800533928,4.34796733052517,0.860423876981386,1.3599426674155,0,0.649776417447669,0,2.66844398250329,0.170430322578058,0.779358013808606,0,2.53518155598025,1.28326477414318,0,0,0.432982082022428,0.760079596425296,0,0.79928715803342,0.776813650941515,0.593768556259299,1.21439728736295,0.304465478312141,1.38369298353635,1.20578112442098,1.41106448562846,0.753999547978053,1.23597483867187,2.60278842455841,0.884610551949874,1.13236794963186,1.98757366614354,0.969750506270444,0,4.39171195517321,3.35114730901528,0.255457055208591,0.838705871541442,0,0.508280908292259,2.84602214869163,28.8225379775735,9.42407640846483,5.56237824615285,6.39288643325826,6.44142938134636,10.5456820994042,1.73126918545538,2.11491850037158,1.76905930903572,7.15502310014011,1.30120442962704,0.919608417733892,1.44049703844279,1.20563854268572,1.15662048557257,1.15302348256365,1.12442069471675,18.6266426932091,3.23351989399263,3.9712276835242,2.63926686245923,2.41115305670332,1.66828349535359,1.0447564995665,0.823128545631774,3.18454826909589,1.40442637462647,0,1.13665399758237,1.24275463521301,1.17263029990548,1.98068267607116,0.946978942340841,0.983821158737019,2.00547246753592,1.16266972375204,0.268273401399619,0.467061369468678,1.48103864922132,1.47750717671186,2.1888578577381,1.75439984910399,0.219550115291051,1.07365135008297,0.630869845692382,1.13195073617213,0.991256348951394,0,2.13288250535234,1.85789337488351,1.67527699718721,1.61346819698674,0.889512175379481,1.52180500890047,0.949058123089023,0.988193728344065,0.754005626400808,0.397912944082302,0.779856348476481,1.79763881730844,0.216138049874694,0.796565093017469,1.13800740571849,1.82797620175566,5.63538678365402,2.03651327845314,2.71533482034676,2.45475369616115,1.89709611372772,1.77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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:237422
|HGNC=
|MCL_coexpression_id=2594
|TSSclassifier=NA
|UniProt=uniprot:Q80XE1
|association_with_transcript=1bp_to_NM_001013441_5end
|cluster_id=chr10:84380402..84380437,+
|description=CAGE_peak_3_at_Ric8b_5end
|id=chr10:84380402..84380437,+
|ontology_enrichment_celltype=CL:0000117!4.56e-07!23;CL:0000337!4.56e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,9.45e-07,23;CL:0000337,9.45e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!5.48e-13!52;UBERON:0005068!5.48e-13!52;UBERON:0006241!5.48e-13!52;UBERON:0007135!5.48e-13!52;UBERON:0000955!1.15e-11!50;UBERON:0006238!1.15e-11!50;UBERON:0000033!2.00e-11!63;UBERON:0002616!3.27e-11!49;UBERON:0001017!9.59e-11!73;UBERON:0005743!9.59e-11!73;UBERON:0003080!6.18e-10!40;UBERON:0000073!1.11e-09!75;UBERON:0001016!1.11e-09!75;UBERON:0002346!1.12e-09!71;UBERON:0003075!1.12e-09!71;UBERON:0007284!1.12e-09!71;UBERON:0002780!1.52e-09!39;UBERON:0001890!1.52e-09!39;UBERON:0006240!1.52e-09!39;UBERON:0003056!3.44e-09!49;UBERON:0000153!7.98e-08!94;UBERON:0004121!1.79e-07!102;UBERON:0000924!1.79e-07!102;UBERON:0006601!1.79e-07!102;UBERON:0007811!2.93e-07!86;UBERON:0002020!4.82e-07!34;UBERON:0001894!8.73e-07!10;UBERON:0006222!8.73e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.65e-13,54;UBERON:0001049,1.11e-12,52;UBERON:0005068,1.11e-12,52;UBERON:0006241,1.11e-12,52;UBERON:0007135,1.11e-12,52;UBERON:0002346,5.73e-11,64;UBERON:0003075,5.73e-11,64;UBERON:0007284,5.73e-11,64;UBERON:0001017,9.20e-11,73;UBERON:0000955,2.98e-10,47;UBERON:0006238,2.98e-10,47;UBERON:0010371,4.46e-10,73;UBERON:0002616,8.46e-10,46;UBERON:0001016,8.99e-10,75;UBERON:0003080,1.96e-09,40;UBERON:0002780,4.90e-09,39;UBERON:0001890,4.90e-09,39;UBERON:0006240,4.90e-09,39;UBERON:0003056,1.46e-08,49;UBERON:0004121,2.59e-08,95;UBERON:0000924,2.59e-08,95;UBERON:0006601,2.59e-08,95;UBERON:0001894,5.04e-07,10;UBERON:0006222,5.04e-07,10
|phase1_expression=3.36312578920067,2.44282785347553,1.36499771816861,1.81478526784098,3.50627010962443,1.6787927191189,0.700837921786577,1.80772652818207,2.53419699873,4.44722600011788,0.856089841127525,0.638177271962691,1.19840510951844,0.786783621770977,0.333109761815663,0.404950534779652,0,0.315462165358238,0,0.84877930359606,2.12608225377674,0.595745707205312,1.30599894569468,0.639969691173627,1.37645568640302,0.57423196411502,2.15380998079537,1.939241094173,0.570070258369122,0.504060259519861,0.443461021310609,1.90509202037889,1.23012957516914,0,2.59966457776147,1.32987716286794,0.816677425049476,2.92972141515835,1.5626706890476,1.57057123192139,2.35292595212406,0.683045484958446,1.94204141212461,1.6366586336825,1.82478476195126,2.56965453026354,0.782391344348039,0,0.439372365468944,0.972149495371417,0.279972843250725,0,2.01339127269284,2.17608642603403,2.68875039313971,0.257259436035947,0,1.03134418455488,3.64169629547276,3.70293685490423,3.80298842103708,0,0,0,0,0,0,0.384218305321555,0.829516898467821,0.810035629990144,0.841299845405528,2.28520787523043,3.09215957332259,2.57230678351403,3.45043695665651,1.83843757322004,2.20231761998777,2.68143409978894,3.22573719838111,2.90149833006426,5.76372154695181,9.37644067002168,1.67509799400829,1.68828783009504,4.27835093775068,4.41942878210502,4.8406371471695,7.08317894136142,0.37863096666592,0.377857800533928,4.34796733052517,0.860423876981386,1.3599426674155,0,0.649776417447669,0,2.66844398250329,0.170430322578058,0.779358013808606,0,2.53518155598025,1.28326477414318,0,0,0.432982082022428,0.760079596425296,0,0.79928715803342,0.776813650941515,0.593768556259299,1.21439728736295,0.304465478312141,1.38369298353635,1.20578112442098,1.41106448562846,0.753999547978053,1.23597483867187,2.60278842455841,0.884610551949874,1.13236794963186,1.98757366614354,0.969750506270444,0,4.39171195517321,3.35114730901528,0.255457055208591,0.838705871541442,0,0.508280908292259,2.84602214869163,28.8225379775735,9.42407640846483,5.56237824615285,6.39288643325826,6.44142938134636,10.5456820994042,1.73126918545538,2.11491850037158,1.76905930903572,7.15502310014011,1.30120442962704,0.919608417733892,1.44049703844279,1.20563854268572,1.15662048557257,1.15302348256365,1.12442069471675,18.6266426932091,3.23351989399263,3.9712276835242,2.63926686245923,2.41115305670332,1.66828349535359,1.0447564995665,0.823128545631774,3.18454826909589,1.40442637462647,0,1.13665399758237,1.24275463521301,1.17263029990548,1.98068267607116,0.946978942340841,0.983821158737019,2.00547246753592,1.16266972375204,0.268273401399619,0.467061369468678,1.48103864922132,1.47750717671186,2.1888578577381,1.75439984910399,0.219550115291051,1.07365135008297,0.630869845692382,1.13195073617213,0.991256348951394,0,2.13288250535234,1.85789337488351,1.67527699718721,1.61346819698674,0.889512175379481,1.52180500890047,0.949058123089023,0.988193728344065,0.754005626400808,0.397912944082302,0.779856348476481,1.79763881730844,0.216138049874694,0.796565093017469,1.13800740571849,1.82797620175566,5.63538678365402,2.03651327845314,2.71533482034676,2.45475369616115,1.89709611372772,1.77132177575523,1.41298855057237,1.72756029490521,0.296452627087149,0.500535317148282,0.196558995113203,0.449724224769707,0.811440485554012,0.241177159752417,0.763877555344259,0.287696137450811,0.162135226775035,0.823684239564244,1.43768206527355,1.11642284300551,1.5601883655728,0.252578877947112,0.358794827043824,0.964887042726734,0.739012760666419,1.89491411770485,1.79261474086228,1.86719594352707,1.40814148973101,1.17254380209271,1.42826184531608,1.36593553500459,1.57635144106191,0.44292937929755,0.797273843287435,1.80249646187312,1.55416483679306,1.73578870297814,0,0,1.96705709207614,0.827810238914197,2.40825884981688,3.16471553798949,1.47541450839008,3.53459298086122,0.94652465824877,0.780877488593277,2.80050417052639,0.716906393857656,1.55959071857676,1.41538265394416,0.404810701674894,0.292255857911312,1.18586333383957,3.53453448063988,1.56134093729095,0.534196811001766,1.62886959353576,1.48473110675282,1.32745138339963,2.6705869977048,0.906970670894253,1.50884063804718,1.18120757152309,0.307435147943927,1.55056975900933,2.18120237686503,1.06949213515416,0.316036757935816,1.05418608574999,0,8.5109901438447,2.52085531643834,2.19909762430683,4.28674070063185,4.25616560741457,4.99432689285798,6.08831376227848,5.48036908406279,2.81606049676452,1.27099242518292,1.10264199027481,1.48397627647332,0.807322133479528,1.26657142349127,1.43246812803764,0.984845398470368,0.874442509889552,3.70850604021019,0.512612642393558,0.206386867963223,0.555583582109135,0.565105371014073,0.27338845544205,0,2.37969801991397,2.79902904647316,2.07299960706636,0,2.21435195506795,2.03319467126849,1.62008011232702,0.627264888043406,1.31017538247707,0.809186078308924,1.23980183588004,0.523511883968059,1.16653475962614,1.24267862617385,0,2.24274819065968,2.15096037594227,1.75006069509643,0.904118764344118,0.337912250981556,1.40828686374905,1.8228613878153,2.09718688851422,1.20792060413003,0,1.26404448251271,2.22997736819181,0.821687657318618,0.649604114888975,0.895133478337407,1.19208812868759,0.721172697119813,1.47689527174577,0.504832249740738,0.685861259894999,1.00826185136841,1.36441033035653,2.11666051608725,1.75315353272353,1.36038230169127,0.221985953374065,1.16628013592318,0.503653849092235,1.15913756419314,2.25218970541418,1.28206136987086,0.857473516316263,1.00314420807073,4.51801474093653,2.76195141904306,4.58316410751517,3.60891682921744,4.7955776383945,1.5107877947794,0.675022500231806,3.60256962579376,4.98456649882625,2.07104124700728,1.764384908931,3.59122386060928,2.73173769206615,1.21553358534147,1.67690530102386,1.47074806760011,1.33348036680969,2.06035057238894,1.92551525755089,1.01078884705519,1.77435509923168,1.13175804831646,1.68554713445788,1.98477972455095,1.89537047553524,1.42888107384922,2.31768651889711,1.15745532278223,2.06042950401653,1.32479028120958,2.40008476669791,1.59728225543404,1.1921809497366,2.18019624948493,1.78807822789128,2.5384382367503,2.0122077016005,3.15683653725411,1.62964936615034,1.68342681497322,1.77952527186261,2.06859412988683,2.86461730218783,1.85924209423159,1.35034627686799,1.74867404556562,2.10538447600868,1.71896843238639,1.14772999241306,2.42650561031467,1.62307484934295
|short_description=p3@Ric8b
}}

Revision as of 22:40, 4 August 2015

Short description:p3@Ric8b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ric8b_5end
Coexpression cluster:MCL_coexpression_mm9:2594
Association with transcript: 1bp_to_NM_001013441_5end
EntrezGene:237422
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ric8b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.36
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.53
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.79
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I21.94
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.82
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.57
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C33.64
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.45
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.68
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.90
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.76
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.08
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H12.60
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.39
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A42.85
corpus striatum, adult.CNhs10487.19-21D828.82
corpus striatum, neonate N00.CNhs11226.630-43F19.42
cortex, adult.CNhs10473.12-14D55.56
cortex, neonate N30.CNhs11107.1392-42F26.39
diencephalon, adult.CNhs10482.20-12F26.44
diencephalon, neonate N30.CNhs11201.1388-42B210.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.11
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G47.16
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A218.63
forelimb, embryo E11.CNhs10596.335-25E23.23
forelimb, embryo E12.CNhs10600.359-14H23.97
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I63.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C62.01
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G12.19
heart, neonate N20.CNhs11127.821-26I61.75
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F81.83
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G72.45
kidney, neonate N10.CNhs11206.758-6D51.90
kidney, neonate N20.CNhs11113.832-19I11.77
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H11.73
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G88.51
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A54.29
pituitary gland, embryo E15.CNhs10592.427-16B94.26
pituitary gland, embryo E16.CNhs11036.449-43F64.99
pituitary gland, embryo E17.CNhs11039.1265-44F56.09
pituitary gland, neonate N00.CNhs11190.1308-22E95.48
placenta, adult pregnant day10.CNhs10472.539-13I72.82
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H31.27
skin, neonate N06.CNhs11097.693-20I51.43
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C93.71
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.07
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.21
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C52.15
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D92.10
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A21.36
thymus, neonate N25.CNhs11125.1362-25G72.12
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.17
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I81.76
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.45e-0723
neuroblast (sensu Vertebrata)9.45e-0723

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.65e-1354
neural tube1.11e-1252
neural rod1.11e-1252
future spinal cord1.11e-1252
neural keel1.11e-1252
neurectoderm5.73e-1164
neural plate5.73e-1164
presumptive neural plate5.73e-1164
central nervous system9.20e-1173
brain2.98e-1047
future brain2.98e-1047
ecto-epithelium4.46e-1073
regional part of brain8.46e-1046
nervous system8.99e-1075
anterior neural tube1.96e-0940
regional part of forebrain4.90e-0939
forebrain4.90e-0939
future forebrain4.90e-0939
pre-chordal neural plate1.46e-0849
ectoderm-derived structure2.59e-0895
ectoderm2.59e-0895
presumptive ectoderm2.59e-0895
diencephalon5.04e-0710
future diencephalon5.04e-0710
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