FFCP PHASE1:Mm9::chr11:100181234..100181265,+: Difference between revisions
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{{FFCP|EntrezGene=100040439,20918,432767,432950,623414,631966|HGNC=|MCL_coexpression_id=0|UniProt=P48024|association_with_transcript=35bp_to_ENSMUST00000049385_5end|description=CAGE_peak_4_at_Gm10713_5end,CAGE_peak_4_at_Gm5450_5end,CAGE_peak_4_at_Gm5471_5end,CAGE_peak_4_at_Gm6428_5end,CAGE_peak_4_at_LOC631966_5end,CAGE_peak_6_at_Eif1_5end|id=chr11:100181234..100181265,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,4.82e-08,23;CL:0000337,4.82e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.31e-13!52;UBERON:0005068!2.31e-13!52;UBERON:0006241!2.31e-13!52;UBERON:0007135!2.31e-13!52;UBERON:0000033!2.20e-12!63;UBERON:0002616!1.03e-11!49;UBERON:0002346!1.47e-11!71;UBERON:0003075!1.47e-11!71;UBERON:0007284!1.47e-11!71;UBERON:0000955!3.89e-11!50;UBERON:0006238!3.89e-11!50;UBERON:0003056!4.18e-11!49;UBERON:0003080!1.90e-10!40;UBERON:0002020!2.61e-10!34;UBERON:0002780!4.56e-10!39;UBERON:0001890!4.56e-10!39;UBERON:0006240!4.56e-10!39;UBERON:0001017!6.55e-10!73;UBERON:0005743!6.55e-10!73;UBERON:0000073!1.63e-09!75;UBERON:0001016!1.63e-09!75;UBERON:0004121!1.14e-08!102;UBERON:0000924!1.14e-08!102;UBERON:0006601!1.14e-08!102;UBERON:0002791!2.69e-08!29;UBERON:0003528!2.69e-08!29;UBERON:0001893!2.69e-08!29;UBERON:0002021!6.56e-08!10;UBERON:0000411!6.56e-08!10;UBERON:0001950!6.56e-08!10;UBERON:0002619!2.96e-07!17;UBERON:0000956!3.74e-07!21;UBERON:0001869!3.74e-07!21;UBERON:0000203!3.74e-07!21;UBERON:0000153!6.65e-07!94;UBERON:0007811!8.87e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0002020,8.04e-16,34;UBERON:0002021,8.46e-15,10;UBERON:0000411,8.46e-15,10;UBERON:0001950,8.46e-15,10;UBERON:0000073,6.49e-11,54;UBERON:0003528,2.07e-10,29;UBERON:0002791,2.07e-10,29;UBERON:0001893,2.07e-10,29;UBERON:0001049,1.16e-09,52;UBERON:0005068,1.16e-09,52;UBERON:0006241,1.16e-09,52;UBERON:0007135,1.16e-09,52;UBERON:0000956,4.74e-09,21;UBERON:0001869,4.74e-09,21;UBERON:0000203,4.74e-09,21;UBERON:0001017,8.14e-09,73;UBERON:0001016,1.62e-08,75;UBERON:0002619,1.64e-08,17;UBERON:0001948,3.29e-08,5;UBERON:0002315,3.29e-08,5;UBERON:0002346,1.77e-07,64;UBERON:0003075,1.77e-07,64;UBERON:0007284,1.77e-07,64;UBERON:0002780,2.07e-07,39;UBERON:0001890,2.07e-07,39;UBERON:0006240,2.07e-07,39;UBERON:0003080,3.42e-07,40;UBERON:0002240,6.49e-07,6;UBERON:0005174,6.49e-07,6;UBERON:0001137,6.49e-07,6|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0.422366166455,0,0,0.0797721589953364,0,0,0,0,0,0.157731082679119,0,0,18.5394372529332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,0,0,0.588231488031014,0.683045484958446,0.971020706062307,0.125896817975577,0,0.183546752161682,0.782391344348039,0,0.219686182734472,0,0.139986421625363,0,0.167782606057736,0.725362142011344,0,0.771778308107841,0,0,0.606949382578793,1.05798195854407,0,0.338844532069132,0,0,0.988866362566974,0,0,0,0.311068836925433,0.135005938331691,0,1.71390590642282,0.220868540951614,0,0.383381884072945,0.919218786610021,1.10115880999389,0.127687338085188,0.46081959976873,0.263772575460388,1.55528994124096,0,1.3959149950069,0,0.916789486660861,1.47314292736834,1.56608848879013,0.186399445825301,0.151452386666368,0,0,0,0,0.539703191637817,0.649776417447669,0,2.94933282276679,0,0.259786004602869,0.70667914902068,0.281686839553361,0,0,0,0.216491041011214,0,0.505524445014783,2.39786147410026,0,0.148442139064825,0.520455980298408,0.304465478312141,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0.239630249011841,0,0,0.449371918214468,0.457500602818626,0.251308704225729,1.21677024134594,0,0.83115217823824,0.811206315338788,0.101839363850316,0.124406970610093,0.252722758433675,0,0.260240885925407,0.229902104433473,0.360124259610698,0.60281927134286,0.204109497453984,0.512454881139399,0,0.258703370739016,0.215567992932842,0.189106080167819,0.351902248327898,0.43839146485515,0,0.348252166522167,0,0.398068533636986,0,0.257347907114715,0,0.207125772535502,0.234526059981096,0.36012412292203,0,0.196764231747404,0,0.465067889500816,0,0.350296027101508,0.493679549740441,0.164167464079095,0,0,0,0.268412837520744,0.420579897128254,0.308713837137853,0.330418782983798,0,0,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.596869416123452,0,0,0,0,0.569003702859245,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0.757965647081939,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0.327869890753351,0,0,0,0,0,0.222798674082394,0,0.404810701674894,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0.604647113929502,0.188605079755898,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0.340439605753788,0.540183282093931,0.258717367565509,0,0.177340233642274,0.178368817602071,0.164549020602121,0.608929898229199,0,0.42366414172764,0,0,0.161464426695906,0,0.119372344003136,0.164140899745061,0,0.556275906031529,0.170870880797853,0,0,0,0.136694227721025,0,0.679913719975421,0.419854356970974,0.414599921413271,0,0.158167996790568,0.203319467126849,0,0,0,0.134864346384821,0,0.26175594198403,0.129614973291793,0.621339313086926,193.346677968677,0,0.165458490457098,0.388902376688095,0.645799117388655,0.506868376472335,0,0.911430693907651,0.838874755405687,36.7207863655529,72.87159158324,0,0,0.102710957164827,0,0.179026695667481,0.198681354781265,0.360586348559907,0,0,0,0,0,0,0.116876902181569,0,0.221985953374065,0.358855426437903,0.503653849092235,0,0,0,0,0,0.564751842617067,0.920650473014354,1.14579102687879,1.3748254587495,2.05524755931193,2.2661816921691,0.675022500231806,0.900642406448441,2.26571204492102,1.55328093525546,0.93408612825759,0,0.170733605754134,0.243106717068294,0,0.367687016900028,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0,0.197008964751127,0.409231043169689,0.154936841185966,0,0.249810577937946,0.233931608445408,0,0,0.220591419119515,0.231867835620421|short_description=p4@Gm10713,p4@Gm5450,p4@Gm5471,p4@Gm6428,p4@LOC631966,p6@Eif1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:100040439,entrezgene:20918,entrezgene:432767,entrezgene:432950,entrezgene:623414,entrezgene:631966 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P48024 | |||
|association_with_transcript=35bp_to_ENSMUST00000049385_5end | |||
|cluster_id=chr11:100181234..100181265,+ | |||
|description=CAGE_peak_4_at_Gm10713_5end,CAGE_peak_4_at_Gm5450_5end,CAGE_peak_4_at_Gm5471_5end,CAGE_peak_4_at_Gm6428_5end,CAGE_peak_4_at_LOC631966_5end,CAGE_peak_6_at_Eif1_5end | |||
|id=chr11:100181234..100181265,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.82e-08,23;CL:0000337,4.82e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.31e-13!52;UBERON:0005068!2.31e-13!52;UBERON:0006241!2.31e-13!52;UBERON:0007135!2.31e-13!52;UBERON:0000033!2.20e-12!63;UBERON:0002616!1.03e-11!49;UBERON:0002346!1.47e-11!71;UBERON:0003075!1.47e-11!71;UBERON:0007284!1.47e-11!71;UBERON:0000955!3.89e-11!50;UBERON:0006238!3.89e-11!50;UBERON:0003056!4.18e-11!49;UBERON:0003080!1.90e-10!40;UBERON:0002020!2.61e-10!34;UBERON:0002780!4.56e-10!39;UBERON:0001890!4.56e-10!39;UBERON:0006240!4.56e-10!39;UBERON:0001017!6.55e-10!73;UBERON:0005743!6.55e-10!73;UBERON:0000073!1.63e-09!75;UBERON:0001016!1.63e-09!75;UBERON:0004121!1.14e-08!102;UBERON:0000924!1.14e-08!102;UBERON:0006601!1.14e-08!102;UBERON:0002791!2.69e-08!29;UBERON:0003528!2.69e-08!29;UBERON:0001893!2.69e-08!29;UBERON:0002021!6.56e-08!10;UBERON:0000411!6.56e-08!10;UBERON:0001950!6.56e-08!10;UBERON:0002619!2.96e-07!17;UBERON:0000956!3.74e-07!21;UBERON:0001869!3.74e-07!21;UBERON:0000203!3.74e-07!21;UBERON:0000153!6.65e-07!94;UBERON:0007811!8.87e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,8.04e-16,34;UBERON:0002021,8.46e-15,10;UBERON:0000411,8.46e-15,10;UBERON:0001950,8.46e-15,10;UBERON:0000073,6.49e-11,54;UBERON:0003528,2.07e-10,29;UBERON:0002791,2.07e-10,29;UBERON:0001893,2.07e-10,29;UBERON:0001049,1.16e-09,52;UBERON:0005068,1.16e-09,52;UBERON:0006241,1.16e-09,52;UBERON:0007135,1.16e-09,52;UBERON:0000956,4.74e-09,21;UBERON:0001869,4.74e-09,21;UBERON:0000203,4.74e-09,21;UBERON:0001017,8.14e-09,73;UBERON:0001016,1.62e-08,75;UBERON:0002619,1.64e-08,17;UBERON:0001948,3.29e-08,5;UBERON:0002315,3.29e-08,5;UBERON:0002346,1.77e-07,64;UBERON:0003075,1.77e-07,64;UBERON:0007284,1.77e-07,64;UBERON:0002780,2.07e-07,39;UBERON:0001890,2.07e-07,39;UBERON:0006240,2.07e-07,39;UBERON:0003080,3.42e-07,40;UBERON:0002240,6.49e-07,6;UBERON:0005174,6.49e-07,6;UBERON:0001137,6.49e-07,6 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0.422366166455,0,0,0.0797721589953364,0,0,0,0,0,0.157731082679119,0,0,18.5394372529332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,0,0,0.588231488031014,0.683045484958446,0.971020706062307,0.125896817975577,0,0.183546752161682,0.782391344348039,0,0.219686182734472,0,0.139986421625363,0,0.167782606057736,0.725362142011344,0,0.771778308107841,0,0,0.606949382578793,1.05798195854407,0,0.338844532069132,0,0,0.988866362566974,0,0,0,0.311068836925433,0.135005938331691,0,1.71390590642282,0.220868540951614,0,0.383381884072945,0.919218786610021,1.10115880999389,0.127687338085188,0.46081959976873,0.263772575460388,1.55528994124096,0,1.3959149950069,0,0.916789486660861,1.47314292736834,1.56608848879013,0.186399445825301,0.151452386666368,0,0,0,0,0.539703191637817,0.649776417447669,0,2.94933282276679,0,0.259786004602869,0.70667914902068,0.281686839553361,0,0,0,0.216491041011214,0,0.505524445014783,2.39786147410026,0,0.148442139064825,0.520455980298408,0.304465478312141,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0.239630249011841,0,0,0.449371918214468,0.457500602818626,0.251308704225729,1.21677024134594,0,0.83115217823824,0.811206315338788,0.101839363850316,0.124406970610093,0.252722758433675,0,0.260240885925407,0.229902104433473,0.360124259610698,0.60281927134286,0.204109497453984,0.512454881139399,0,0.258703370739016,0.215567992932842,0.189106080167819,0.351902248327898,0.43839146485515,0,0.348252166522167,0,0.398068533636986,0,0.257347907114715,0,0.207125772535502,0.234526059981096,0.36012412292203,0,0.196764231747404,0,0.465067889500816,0,0.350296027101508,0.493679549740441,0.164167464079095,0,0,0,0.268412837520744,0.420579897128254,0.308713837137853,0.330418782983798,0,0,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.596869416123452,0,0,0,0,0.569003702859245,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0.757965647081939,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0.327869890753351,0,0,0,0,0,0.222798674082394,0,0.404810701674894,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0.604647113929502,0.188605079755898,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0.340439605753788,0.540183282093931,0.258717367565509,0,0.177340233642274,0.178368817602071,0.164549020602121,0.608929898229199,0,0.42366414172764,0,0,0.161464426695906,0,0.119372344003136,0.164140899745061,0,0.556275906031529,0.170870880797853,0,0,0,0.136694227721025,0,0.679913719975421,0.419854356970974,0.414599921413271,0,0.158167996790568,0.203319467126849,0,0,0,0.134864346384821,0,0.26175594198403,0.129614973291793,0.621339313086926,193.346677968677,0,0.165458490457098,0.388902376688095,0.645799117388655,0.506868376472335,0,0.911430693907651,0.838874755405687,36.7207863655529,72.87159158324,0,0,0.102710957164827,0,0.179026695667481,0.198681354781265,0.360586348559907,0,0,0,0,0,0,0.116876902181569,0,0.221985953374065,0.358855426437903,0.503653849092235,0,0,0,0,0,0.564751842617067,0.920650473014354,1.14579102687879,1.3748254587495,2.05524755931193,2.2661816921691,0.675022500231806,0.900642406448441,2.26571204492102,1.55328093525546,0.93408612825759,0,0.170733605754134,0.243106717068294,0,0.367687016900028,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0,0.197008964751127,0.409231043169689,0.154936841185966,0,0.249810577937946,0.233931608445408,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p4@Gm10713,p4@Gm5450,p4@Gm5471,p4@Gm6428,p4@LOC631966,p6@Eif1 | |||
}} |
Revision as of 03:04, 5 August 2015
Short description: | p4@Gm10713, p4@Gm5450, p4@Gm5471, p4@Gm6428, p4@LOC631966, p6@Eif1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gm10713_5end, CAGE_peak_4_at_Gm5450_5end, CAGE_peak_4_at_Gm5471_5end, CAGE_peak_4_at_Gm6428_5end, CAGE_peak_4_at_LOC631966_5end, CAGE_peak_6_at_Eif1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 35bp_to_ENSMUST00000049385_5end |
EntrezGene: | 100040439,20918,432767,432950,623414,631966 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.82e-08 | 23 |
neuroblast (sensu Vertebrata) | 4.82e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
gray matter | 8.04e-16 | 34 |
occipital lobe | 8.46e-15 | 10 |
visual cortex | 8.46e-15 | 10 |
neocortex | 8.46e-15 | 10 |
regional part of nervous system | 6.49e-11 | 54 |
brain grey matter | 2.07e-10 | 29 |
regional part of telencephalon | 2.07e-10 | 29 |
telencephalon | 2.07e-10 | 29 |
neural tube | 1.16e-09 | 52 |
neural rod | 1.16e-09 | 52 |
future spinal cord | 1.16e-09 | 52 |
neural keel | 1.16e-09 | 52 |
cerebral cortex | 4.74e-09 | 21 |
cerebral hemisphere | 4.74e-09 | 21 |
pallium | 4.74e-09 | 21 |
central nervous system | 8.14e-09 | 73 |
nervous system | 1.62e-08 | 75 |
regional part of cerebral cortex | 1.64e-08 | 17 |
regional part of spinal cord | 3.29e-08 | 5 |
gray matter of spinal cord | 3.29e-08 | 5 |
neurectoderm | 1.77e-07 | 64 |
neural plate | 1.77e-07 | 64 |
presumptive neural plate | 1.77e-07 | 64 |
regional part of forebrain | 2.07e-07 | 39 |
forebrain | 2.07e-07 | 39 |
future forebrain | 2.07e-07 | 39 |
anterior neural tube | 3.42e-07 | 40 |
spinal cord | 6.49e-07 | 6 |
dorsal region element | 6.49e-07 | 6 |
dorsum | 6.49e-07 | 6 |