FFCP PHASE1:Mm9::chr2:42499343..42499347,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=904|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:42499343..42499347,-|id=chr2:42499343..42499347,-|ontology_enrichment_celltype=CL:0000540!2.22e-08!33;CL:0000047!2.22e-08!33;CL:0000031!2.22e-08!33;CL:0000404!2.22e-08!33;CL:0000117!1.48e-07!23;CL:0000337!1.48e-07!23;CL:0000393!2.24e-07!39;CL:0000211!2.24e-07!39|ontology_enrichment_celltype_v019_2=CL:0002614,1.27e-20,3;CL:0002612,1.99e-20,3;CL:0000117,8.76e-11,23;CL:0000337,8.76e-11,23;CL:0000540,1.14e-07,33;CL:0000047,1.14e-07,33;CL:0000031,1.14e-07,33;CL:0000404,1.14e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!7.14e-24!52;UBERON:0005068!7.14e-24!52;UBERON:0006241!7.14e-24!52;UBERON:0007135!7.14e-24!52;UBERON:0001017!1.09e-23!73;UBERON:0005743!1.09e-23!73;UBERON:0002346!1.19e-23!71;UBERON:0003075!1.19e-23!71;UBERON:0007284!1.19e-23!71;UBERON:0000073!9.89e-23!75;UBERON:0001016!9.89e-23!75;UBERON:0000955!1.04e-21!50;UBERON:0006238!1.04e-21!50;UBERON:0002616!1.19e-20!49;UBERON:0000033!6.79e-19!63;UBERON:0004121!1.89e-18!102;UBERON:0000924!1.89e-18!102;UBERON:0006601!1.89e-18!102;UBERON:0003080!5.33e-18!40;UBERON:0002020!1.43e-17!34;UBERON:0003056!4.60e-17!49;UBERON:0002780!5.29e-17!39;UBERON:0001890!5.29e-17!39;UBERON:0006240!5.29e-17!39;UBERON:0002791!3.30e-12!29;UBERON:0003528!3.30e-12!29;UBERON:0001893!3.30e-12!29;UBERON:0007811!3.83e-11!86;UBERON:0000153!3.32e-10!94;UBERON:0002021!3.21e-09!10;UBERON:0000411!3.21e-09!10;UBERON:0001950!3.21e-09!10;UBERON:0000956!1.01e-07!21;UBERON:0001869!1.01e-07!21;UBERON:0000203!1.01e-07!21;UBERON:0001948!1.11e-07!5;UBERON:0002315!1.11e-07!5;UBERON:0000025!2.08e-07!114;UBERON:0002619!4.42e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.27e-20,3;UBERON:0009663,1.27e-20,3;UBERON:0009661,1.27e-20,3;UBERON:0000125,1.27e-20,3;UBERON:0002308,1.27e-20,3;UBERON:0002257,1.99e-20,3;UBERON:0002020,8.43e-16,34;UBERON:0002950,9.55e-16,4;UBERON:0001891,9.55e-16,4;UBERON:0009616,9.55e-16,4;UBERON:0010286,9.55e-16,4;UBERON:0001948,1.08e-12,5;UBERON:0002315,1.08e-12,5;UBERON:0002240,9.54e-11,6;UBERON:0005174,9.54e-11,6;UBERON:0001137,9.54e-11,6;UBERON:0001049,1.77e-10,52;UBERON:0005068,1.77e-10,52;UBERON:0006241,1.77e-10,52;UBERON:0007135,1.77e-10,52;UBERON:0000073,4.19e-10,54;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0003528,1.47e-08,29;UBERON:0002791,1.47e-08,29;UBERON:0001893,1.47e-08,29;UBERON:0002420,2.25e-08,8;UBERON:0007245,2.25e-08,8;UBERON:0010009,2.25e-08,8;UBERON:0010011,2.25e-08,8;UBERON:0000454,2.25e-08,8;UBERON:0010371,1.48e-07,73;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0.441737081903227,0,0.0958454710182364,0,0,0.766124028511126,0.46081959976873,0.131886287730194,0.0914876436024097,0,0,2.25105044012672,2.44477196442896,2.35702868378934,1.99320353118744,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.299581278809645,0.457500602818626,0.502617408451458,0.695297280769106,0,0.41557608911912,0.486723789203273,0,0,0,0.210441855886474,0,0,0,0.30140963567143,0,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0,0,0,0.584511715822624,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0.354680467284547,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.171853182343688,0,1.5107877947794,0.675022500231806,0.900642406448441,0,1.03552062350364,0.103787347584177,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0.128050304809739,0,0,0,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p@chr2:42499343..42499347,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=904 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:42499343..42499347,- | |||
|description=CAGE_peak_at_chr2:42499343..42499347,- | |||
|id=chr2:42499343..42499347,- | |||
|ontology_enrichment_celltype=CL:0000540!2.22e-08!33;CL:0000047!2.22e-08!33;CL:0000031!2.22e-08!33;CL:0000404!2.22e-08!33;CL:0000117!1.48e-07!23;CL:0000337!1.48e-07!23;CL:0000393!2.24e-07!39;CL:0000211!2.24e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.27e-20,3;CL:0002612,1.99e-20,3;CL:0000117,8.76e-11,23;CL:0000337,8.76e-11,23;CL:0000540,1.14e-07,33;CL:0000047,1.14e-07,33;CL:0000031,1.14e-07,33;CL:0000404,1.14e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.14e-24!52;UBERON:0005068!7.14e-24!52;UBERON:0006241!7.14e-24!52;UBERON:0007135!7.14e-24!52;UBERON:0001017!1.09e-23!73;UBERON:0005743!1.09e-23!73;UBERON:0002346!1.19e-23!71;UBERON:0003075!1.19e-23!71;UBERON:0007284!1.19e-23!71;UBERON:0000073!9.89e-23!75;UBERON:0001016!9.89e-23!75;UBERON:0000955!1.04e-21!50;UBERON:0006238!1.04e-21!50;UBERON:0002616!1.19e-20!49;UBERON:0000033!6.79e-19!63;UBERON:0004121!1.89e-18!102;UBERON:0000924!1.89e-18!102;UBERON:0006601!1.89e-18!102;UBERON:0003080!5.33e-18!40;UBERON:0002020!1.43e-17!34;UBERON:0003056!4.60e-17!49;UBERON:0002780!5.29e-17!39;UBERON:0001890!5.29e-17!39;UBERON:0006240!5.29e-17!39;UBERON:0002791!3.30e-12!29;UBERON:0003528!3.30e-12!29;UBERON:0001893!3.30e-12!29;UBERON:0007811!3.83e-11!86;UBERON:0000153!3.32e-10!94;UBERON:0002021!3.21e-09!10;UBERON:0000411!3.21e-09!10;UBERON:0001950!3.21e-09!10;UBERON:0000956!1.01e-07!21;UBERON:0001869!1.01e-07!21;UBERON:0000203!1.01e-07!21;UBERON:0001948!1.11e-07!5;UBERON:0002315!1.11e-07!5;UBERON:0000025!2.08e-07!114;UBERON:0002619!4.42e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.27e-20,3;UBERON:0009663,1.27e-20,3;UBERON:0009661,1.27e-20,3;UBERON:0000125,1.27e-20,3;UBERON:0002308,1.27e-20,3;UBERON:0002257,1.99e-20,3;UBERON:0002020,8.43e-16,34;UBERON:0002950,9.55e-16,4;UBERON:0001891,9.55e-16,4;UBERON:0009616,9.55e-16,4;UBERON:0010286,9.55e-16,4;UBERON:0001948,1.08e-12,5;UBERON:0002315,1.08e-12,5;UBERON:0002240,9.54e-11,6;UBERON:0005174,9.54e-11,6;UBERON:0001137,9.54e-11,6;UBERON:0001049,1.77e-10,52;UBERON:0005068,1.77e-10,52;UBERON:0006241,1.77e-10,52;UBERON:0007135,1.77e-10,52;UBERON:0000073,4.19e-10,54;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0003528,1.47e-08,29;UBERON:0002791,1.47e-08,29;UBERON:0001893,1.47e-08,29;UBERON:0002420,2.25e-08,8;UBERON:0007245,2.25e-08,8;UBERON:0010009,2.25e-08,8;UBERON:0010011,2.25e-08,8;UBERON:0000454,2.25e-08,8;UBERON:0010371,1.48e-07,73;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0.441737081903227,0,0.0958454710182364,0,0,0.766124028511126,0.46081959976873,0.131886287730194,0.0914876436024097,0,0,2.25105044012672,2.44477196442896,2.35702868378934,1.99320353118744,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.299581278809645,0.457500602818626,0.502617408451458,0.695297280769106,0,0.41557608911912,0.486723789203273,0,0,0,0.210441855886474,0,0,0,0.30140963567143,0,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0,0,0,0.584511715822624,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0.354680467284547,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.171853182343688,0,1.5107877947794,0.675022500231806,0.900642406448441,0,1.03552062350364,0.103787347584177,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0.128050304809739,0,0,0,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr2:42499343..42499347,- | |||
}} |
Latest revision as of 04:18, 5 August 2015
Short description: | p@chr2:42499343..42499347, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:42499343..42499347, - |
Coexpression cluster: | MCL_coexpression_mm9:904 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.27e-20 | 3 |
neuron of the ventral spinal cord | 1.99e-20 | 3 |
CNS neuron (sensu Vertebrata) | 8.76e-11 | 23 |
neuroblast (sensu Vertebrata) | 8.76e-11 | 23 |
neuron | 1.14e-07 | 33 |
neuronal stem cell | 1.14e-07 | 33 |
neuroblast | 1.14e-07 | 33 |
electrically signaling cell | 1.14e-07 | 33 |