Personal tools

FFCP PHASE1:Mm9::chr17:69506193..69506200,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=13823|HGNC=|MCL_coexpression_id=3111|UniProt=F8WH44,Q9WV92,E9QN88,Q8BGK4,A7YY80|association_with_transcript=43bp_to_ENSMUST00000024843,ENSMUST00000080208,ENSMUST00000112678,ENSMUST00000112679,ENSMUST00000112680,NM_013813,uc008dko.1,uc008dkp.1,uc008dks.2_5end|description=CAGE_peak_4_at_Epb4.1l3_5end|id=chr17:69506193..69506200,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.32e-13!73;UBERON:0005743!2.32e-13!73;UBERON:0000073!3.18e-13!75;UBERON:0001016!3.18e-13!75;UBERON:0004121!1.09e-12!102;UBERON:0000924!1.09e-12!102;UBERON:0006601!1.09e-12!102;UBERON:0002346!2.94e-12!71;UBERON:0003075!2.94e-12!71;UBERON:0007284!2.94e-12!71;UBERON:0000033!8.14e-11!63;UBERON:0001049!1.65e-10!52;UBERON:0005068!1.65e-10!52;UBERON:0006241!1.65e-10!52;UBERON:0007135!1.65e-10!52;UBERON:0000955!2.04e-10!50;UBERON:0006238!2.04e-10!50;UBERON:0002616!7.58e-10!49;UBERON:0000153!1.43e-09!94;UBERON:0003056!1.02e-07!49;UBERON:0007811!1.06e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.21e-12,54;UBERON:0001017,5.53e-11,73;UBERON:0001016,1.83e-10,75;UBERON:0001049,2.23e-10,52;UBERON:0005068,2.23e-10,52;UBERON:0006241,2.23e-10,52;UBERON:0007135,2.23e-10,52;UBERON:0002346,5.58e-09,64;UBERON:0003075,5.58e-09,64;UBERON:0007284,5.58e-09,64;UBERON:0000955,8.36e-09,47;UBERON:0006238,8.36e-09,47;UBERON:0003076,2.79e-08,12;UBERON:0003057,2.79e-08,12;UBERON:0002616,5.89e-08,46;UBERON:0004121,7.42e-08,95;UBERON:0000924,7.42e-08,95;UBERON:0006601,7.42e-08,95;UBERON:0010371,1.13e-07,73|phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0,0,0.42438965179803,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,0.608261587317087,1.83546752161682,0,1.09012578190223,0.439372365468944,0.388859798148567,0.139986421625363,0,0,0,0,0.771778308107841,0.286533439938757,0,0.404632921719196,0,0.633831403506179,0.338844532069132,0,0.899899717281399,0,0.7104801149461,0.299600110518405,0.384218305321555,1.14058573539325,0.945041568321835,0.841299845405528,0.856952953211411,1.32521124570968,0.367472397644862,0.287536413054709,0,2.20231761998777,2.42605942361857,2.91852413186863,0.395658863190582,0.457438218012048,0,1.67509799400829,0,1.5279824777681,1.76777151284201,1.13897344639282,0.559198337475902,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0.280888840263504,1.02258193546835,0.519572009205738,0,0.14084341977668,1.28326477414318,0,7.11066703153331,0,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0.346970653532272,0.304465478312141,0.461230994512117,0.301445281105245,0.470354828542819,0.628332956648377,0.247194967734374,0,0,0.485300549842228,0.220841518460394,0.484875253135222,0,1.17112318804619,1.04723353406728,0,0,0,0,2.24685959107234,1.83000241127451,0.125654352112864,2.08589184230732,2.04572365864264,1.0389402227978,0.648965052271031,1.2220723662038,0,0,0,0.650602214813519,0.459804208866946,0.720248519221397,1.50704817835715,0.816437989815934,0.640568601424249,0.562210347358373,0.776110112217047,0.215567992932842,1.51284864134255,1.75951124163949,1.09597866213787,0.556094498451196,1.0447564995665,2.26360350048738,0.199034266818493,0,0,0,1.24275463521301,0.938104239924385,0.720248245844059,1.89395788468168,0.787056926989615,0.462801338662135,1.62773761325285,0,1.16765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0,0.219550115291051,0.268412837520744,0.630869845692382,0.411618449517138,0,0,0,0.696710015581316,0,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0.379335801906163,0.114248512609729,0,0.610953983535943,0,0.140271639780637,0,0,0,0,0,0.333690211432188,0,0,0.405720242777006,0.72353147925725,0,0.287696137450811,0,0.274561413188081,0,0.744281895337007,0.312037673114561,0.252578877947112,0.179397413521912,0,0,1.13694847062291,0.488894929326078,0.339490171550376,0.234690248288502,0.670025029767263,0.476087281772027,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0.289298117163023,0,0,0,0,3.21101179975584,2.69586879162067,1.47541450839008,0.252470927204373,0.94652465824877,0.390438744296638,1.50796378412959,0.477937595905104,0.891194696329576,0.849229592366497,1.61924280669958,0.876767573733936,0,2.57057053137446,0.141940085208269,0.890328018336276,0.977321756121456,0,0,0,0,0.565815239267694,0.590603785761546,0.614870295887855,0.258428293168221,1.09060118843252,0.356497378384721,0,0,0,1.02131881726136,1.08036656418786,0.517434735131018,1.50035924522115,0.354680467284547,0.356737635204141,1.48094118541909,0.304464949114599,0.23467170806371,0.63549621259146,0,0.16488625294148,0.645857706783622,1.02531972377865,0.477489376012546,0.164140899745061,0,4.26478194624172,0.512612642393558,0,0,0.188368457004691,0.27338845544205,0.228778173206523,0.509935289981566,0.279902904647316,0.552799895217695,0,0.632671987162271,0.203319467126849,0.432021363287205,0,0,0.404593039154462,0.247960367176008,0,0,0,0,0,0.330916980914195,0.194451188344048,0.258319646955462,0.506868376472335,0.234714477291508,0.781226309063701,0.104859344425711,0,0,0,1.21635129174099,0.410843828659309,0.389762468933385,0.716106782669926,0,0.841368146639782,0.147689527174577,0.100966449948148,0.457240839929999,0.302478555410522,0.292373642219257,0.0962118416403295,0.350630706544707,0.226730383615211,0.443971906748129,0.0897138566094757,0,0,1.12609485270709,0.183151624267265,0.214368379079066,0,0.564751842617067,1.38097570952153,0,1.54667864109319,1.37016503954128,0.755393897389701,0.675022500231806,1.35096360967266,0.906284817968409,1.03552062350364,0.93408612825759,1.59609949360412,1.19513524027894,1.45864030240976,1.04806581313991,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0.758091635291392,1.77435509923168,0.188626341386076,1.03005658216871,0.768301828858431,0.918967503289812,0,0.695305955669133,0.38581844092741,1.23625770240992,1.03039244094078,0,0.354951612318675,0.476872379894642,1.0174249164263,0.846984423737976,0.761531471025089,1.82927972872773,1.31534855718921,1.35804113845862,0.561142271657738,1.06771516311757,0.591026894253381,0.818462086339379,1.08455788830176,0.578719832943424,0.999242311751784,0.467863216890817,0.429742108096597,0.57386499620653,0.441182838239031,0|short_description=p4@Epb4.1l3}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:13823
|HGNC=
|MCL_coexpression_id=3111
|TSSclassifier=NA
|UniProt=uniprot:F8WH44,uniprot:Q9WV92,uniprot:E9QN88,uniprot:Q8BGK4,uniprot:A7YY80
|association_with_transcript=43bp_to_ENSMUST00000024843,ENSMUST00000080208,ENSMUST00000112678,ENSMUST00000112679,ENSMUST00000112680,NM_013813,uc008dko.1,uc008dkp.1,uc008dks.2_5end
|cluster_id=chr17:69506193..69506200,+
|description=CAGE_peak_4_at_Epb4.1l3_5end
|id=chr17:69506193..69506200,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.32e-13!73;UBERON:0005743!2.32e-13!73;UBERON:0000073!3.18e-13!75;UBERON:0001016!3.18e-13!75;UBERON:0004121!1.09e-12!102;UBERON:0000924!1.09e-12!102;UBERON:0006601!1.09e-12!102;UBERON:0002346!2.94e-12!71;UBERON:0003075!2.94e-12!71;UBERON:0007284!2.94e-12!71;UBERON:0000033!8.14e-11!63;UBERON:0001049!1.65e-10!52;UBERON:0005068!1.65e-10!52;UBERON:0006241!1.65e-10!52;UBERON:0007135!1.65e-10!52;UBERON:0000955!2.04e-10!50;UBERON:0006238!2.04e-10!50;UBERON:0002616!7.58e-10!49;UBERON:0000153!1.43e-09!94;UBERON:0003056!1.02e-07!49;UBERON:0007811!1.06e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.21e-12,54;UBERON:0001017,5.53e-11,73;UBERON:0001016,1.83e-10,75;UBERON:0001049,2.23e-10,52;UBERON:0005068,2.23e-10,52;UBERON:0006241,2.23e-10,52;UBERON:0007135,2.23e-10,52;UBERON:0002346,5.58e-09,64;UBERON:0003075,5.58e-09,64;UBERON:0007284,5.58e-09,64;UBERON:0000955,8.36e-09,47;UBERON:0006238,8.36e-09,47;UBERON:0003076,2.79e-08,12;UBERON:0003057,2.79e-08,12;UBERON:0002616,5.89e-08,46;UBERON:0004121,7.42e-08,95;UBERON:0000924,7.42e-08,95;UBERON:0006601,7.42e-08,95;UBERON:0010371,1.13e-07,73
|phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0,0,0.42438965179803,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,0.608261587317087,1.83546752161682,0,1.09012578190223,0.439372365468944,0.388859798148567,0.139986421625363,0,0,0,0,0.771778308107841,0.286533439938757,0,0.404632921719196,0,0.633831403506179,0.338844532069132,0,0.899899717281399,0,0.7104801149461,0.299600110518405,0.384218305321555,1.14058573539325,0.945041568321835,0.841299845405528,0.856952953211411,1.32521124570968,0.367472397644862,0.287536413054709,0,2.20231761998777,2.42605942361857,2.91852413186863,0.395658863190582,0.457438218012048,0,1.67509799400829,0,1.5279824777681,1.76777151284201,1.13897344639282,0.559198337475902,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0.280888840263504,1.02258193546835,0.519572009205738,0,0.14084341977668,1.28326477414318,0,7.11066703153331,0,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0.346970653532272,0.304465478312141,0.461230994512117,0.301445281105245,0.470354828542819,0.628332956648377,0.247194967734374,0,0,0.485300549842228,0.220841518460394,0.484875253135222,0,1.17112318804619,1.04723353406728,0,0,0,0,2.24685959107234,1.83000241127451,0.125654352112864,2.08589184230732,2.04572365864264,1.0389402227978,0.648965052271031,1.2220723662038,0,0,0,0.650602214813519,0.459804208866946,0.720248519221397,1.50704817835715,0.816437989815934,0.640568601424249,0.562210347358373,0.776110112217047,0.215567992932842,1.51284864134255,1.75951124163949,1.09597866213787,0.556094498451196,1.0447564995665,2.26360350048738,0.199034266818493,0,0,0,1.24275463521301,0.938104239924385,0.720248245844059,1.89395788468168,0.787056926989615,0.462801338662135,1.62773761325285,0,1.16765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0,0.219550115291051,0.268412837520744,0.630869845692382,0.411618449517138,0,0,0,0.696710015581316,0,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0.379335801906163,0.114248512609729,0,0.610953983535943,0,0.140271639780637,0,0,0,0,0,0.333690211432188,0,0,0.405720242777006,0.72353147925725,0,0.287696137450811,0,0.274561413188081,0,0.744281895337007,0.312037673114561,0.252578877947112,0.179397413521912,0,0,1.13694847062291,0.488894929326078,0.339490171550376,0.234690248288502,0.670025029767263,0.476087281772027,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0.289298117163023,0,0,0,0,3.21101179975584,2.69586879162067,1.47541450839008,0.252470927204373,0.94652465824877,0.390438744296638,1.50796378412959,0.477937595905104,0.891194696329576,0.849229592366497,1.61924280669958,0.876767573733936,0,2.57057053137446,0.141940085208269,0.890328018336276,0.977321756121456,0,0,0,0,0.565815239267694,0.590603785761546,0.614870295887855,0.258428293168221,1.09060118843252,0.356497378384721,0,0,0,1.02131881726136,1.08036656418786,0.517434735131018,1.50035924522115,0.354680467284547,0.356737635204141,1.48094118541909,0.304464949114599,0.23467170806371,0.63549621259146,0,0.16488625294148,0.645857706783622,1.02531972377865,0.477489376012546,0.164140899745061,0,4.26478194624172,0.512612642393558,0,0,0.188368457004691,0.27338845544205,0.228778173206523,0.509935289981566,0.279902904647316,0.552799895217695,0,0.632671987162271,0.203319467126849,0.432021363287205,0,0,0.404593039154462,0.247960367176008,0,0,0,0,0,0.330916980914195,0.194451188344048,0.258319646955462,0.506868376472335,0.234714477291508,0.781226309063701,0.104859344425711,0,0,0,1.21635129174099,0.410843828659309,0.389762468933385,0.716106782669926,0,0.841368146639782,0.147689527174577,0.100966449948148,0.457240839929999,0.302478555410522,0.292373642219257,0.0962118416403295,0.350630706544707,0.226730383615211,0.443971906748129,0.0897138566094757,0,0,1.12609485270709,0.183151624267265,0.214368379079066,0,0.564751842617067,1.38097570952153,0,1.54667864109319,1.37016503954128,0.755393897389701,0.675022500231806,1.35096360967266,0.906284817968409,1.03552062350364,0.93408612825759,1.59609949360412,1.19513524027894,1.45864030240976,1.04806581313991,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0.758091635291392,1.77435509923168,0.188626341386076,1.03005658216871,0.768301828858431,0.918967503289812,0,0.695305955669133,0.38581844092741,1.23625770240992,1.03039244094078,0,0.354951612318675,0.476872379894642,1.0174249164263,0.846984423737976,0.761531471025089,1.82927972872773,1.31534855718921,1.35804113845862,0.561142271657738,1.06771516311757,0.591026894253381,0.818462086339379,1.08455788830176,0.578719832943424,0.999242311751784,0.467863216890817,0.429742108096597,0.57386499620653,0.441182838239031,0
|short_description=p4@Epb4.1l3
}}

Revision as of 06:28, 5 August 2015

Short description:p4@Epb4.1l3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Epb4.1l3_5end
Coexpression cluster:MCL_coexpression_mm9:3111
Association with transcript: 43bp_to_ENSMUST00000024843, ENSMUST00000080208, ENSMUST00000112678, ENSMUST00000112679, ENSMUST00000112680, NM_013813, uc008dko.1, uc008dkp.1, uc008dks.2_5end
EntrezGene:13823
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Epb4.1l3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B52.26
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E31.17
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.21
medulla oblongata, neonate N30.CNhs11200.1396-42A32.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H31.03
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.26
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.21e-1254
central nervous system5.53e-1173
nervous system1.83e-1075
neural tube2.23e-1052
neural rod2.23e-1052
future spinal cord2.23e-1052
neural keel2.23e-1052
neurectoderm5.58e-0964
neural plate5.58e-0964
presumptive neural plate5.58e-0964
brain8.36e-0947
future brain8.36e-0947
posterior neural tube2.79e-0812
chordal neural plate2.79e-0812
regional part of brain5.89e-0846
ectoderm-derived structure7.42e-0895
ectoderm7.42e-0895
presumptive ectoderm7.42e-0895
ecto-epithelium1.13e-0773
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:69506193..69506200,%2B&oldid=3868922"