FFCP PHASE1:Mm9::chr6:23789471..23789487,-: Difference between revisions
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{{FFCP|EntrezGene=320405|HGNC=|MCL_coexpression_id=2002|UniProt=A4PI80,A4PI81,Q8BYR5|association_with_transcript=-50bp_to_ENSMUST00000164608,NM_001252105,NM_001252106,NM_001252107,NM_001252108,NM_001252109,NM_001252110,NM_153163_5end|description=CAGE_peak_6_at_Cadps2_5end|id=chr6:23789471..23789487,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.89e-09!63;UBERON:0001049!7.86e-09!52;UBERON:0005068!7.86e-09!52;UBERON:0006241!7.86e-09!52;UBERON:0007135!7.86e-09!52;UBERON:0000955!2.24e-08!50;UBERON:0006238!2.24e-08!50;UBERON:0002616!4.04e-08!49;UBERON:0003080!6.02e-08!40;UBERON:0002780!1.01e-07!39;UBERON:0001890!1.01e-07!39;UBERON:0006240!1.01e-07!39;UBERON:0002346!1.19e-07!71;UBERON:0003075!1.19e-07!71;UBERON:0007284!1.19e-07!71;UBERON:0003056!1.64e-07!49;UBERON:0001017!4.43e-07!73;UBERON:0005743!4.43e-07!73;UBERON:0007023!5.27e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0010371,3.16e-10,73;UBERON:0002021,2.62e-09,10;UBERON:0000411,2.62e-09,10;UBERON:0001950,2.62e-09,10;UBERON:0002616,1.26e-08,46;UBERON:0000073,2.33e-08,54;UBERON:0000955,2.44e-08,47;UBERON:0006238,2.44e-08,47;UBERON:0002346,2.47e-08,64;UBERON:0003075,2.47e-08,64;UBERON:0007284,2.47e-08,64;UBERON:0002780,3.23e-08,39;UBERON:0001890,3.23e-08,39;UBERON:0006240,3.23e-08,39;UBERON:0001049,5.98e-08,52;UBERON:0005068,5.98e-08,52;UBERON:0006241,5.98e-08,52;UBERON:0007135,5.98e-08,52;UBERON:0003080,6.59e-08,40;UBERON:0003056,8.23e-08,49;UBERON:0004121,8.58e-08,95;UBERON:0000924,8.58e-08,95;UBERON:0006601,8.58e-08,95|phase1_expression=1.28119077683835,0,0,0.30246421130683,0.500895729946347,2.18243053485457,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.159992422793407,0.45881856213434,0,0.430761996159075,0.646413698057667,0.570070258369122,1.00812051903972,0.443461021310609,0,0,0,1.73310971850765,0.997407872150954,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.311068836925433,0,0.210324961351382,0,0.883474163806454,0,0.191690942036473,0,0,1.14918604276669,0.153606533256243,0.131886287730194,0.457438218012048,1.04182674111352,1.95428099300967,0.56276261003168,1.83357897332172,0.294628585473668,1.13897344639282,0.931997229126503,0,0,0.579728977403356,0.860423876981386,0,0,1.29955283489534,0.448026887097336,0.561777680527007,0,0,0,1.69012103732017,0,0,0,0.216491041011214,0,0,1.25602267690966,0,0,0,0.304465478312141,0.230615497256059,0,0.117588707135705,0.125666591329675,0.247194967734374,0,0,0,0,0,0,5.27005434620785,4.1889341362691,0.510914110417183,0,0,0,0.599162557619291,0.457500602818626,0.251308704225729,0.521472960576829,2.30143911597297,0.62336413367868,1.46017136760982,0.611036183101898,0.124406970610093,1.76905930903572,19.5710925974421,0,0,0,0.30140963567143,0.204109497453984,0.12811372028485,0.655912071918102,4.13925393182425,0.215567992932842,0.378212160335639,0.351902248327898,0.657587197282725,0.556094498451196,0,0,0.59710280045548,0,0,0,0.207125772535502,0,0,0,0,0,0,0.268273401399619,0,0.16455984991348,0,0,0,0,0,0.841159794256509,0.205809224758569,0.330418782983798,0.264450566663544,0,0,0,0,0.22237804384487,0.190225626112559,0.949058123089023,0.329397909448022,0.502670417600539,0.397912944082302,0.38992817423824,0,0.432276099749388,0.995706366271836,0.189667900953082,0.342745537829186,1.1270773567308,0.814605311381257,0.193952487167626,0.631222379012867,1.01178459398812,1.18088118383682,0.941992367048249,0.863780147452604,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0.554259570499814,0.37898282354097,0.488894929326078,0.509235257325564,1.17345124144251,1.67506257441816,0.952174563544055,1.36593553500459,0.788175720530955,0.44292937929755,0.956728611944923,0.491589944147214,0.172684981865896,1.44649058581512,0,0,2.45882136509518,1.37968373152366,0.481651769963376,0.703270119553219,0,0,0.315508219416257,0.390438744296638,1.72338718186239,0,0.222798674082394,0,0,0,0,0.642642632843614,0.283880170416537,0.534196811001766,0.162886959353576,0.494910368917606,1.32745138339963,0,0,0.377210159511796,0.295301892880773,0.614870295887855,0.775284879504663,1.09060118843252,0.356497378384721,0.632073515871632,1.05418608574999,2.06271086496374,4.42571487479924,0.720244376125241,0.388076051348264,0.857348140126369,1.77340233642274,1.07021290561242,1.81003922662333,1.522324745573,0,0,2.64634077665954,0.16488625294148,0,0.0603129249281559,0,0,0.291480836629851,0.18542530201051,0,0,0.185194527369712,0,0,0,0.849892149969277,0,0.552799895217695,0.954670618015114,0.158167996790568,0.406638934253697,0.108005340821801,1.25452977608681,0.87345025498471,1.34864346384821,1.32245529160537,1.30877970992015,0.388844919875379,8.69875038321696,0.56369293868419,0,0.165458490457098,0,0,0,0,0.13020438484395,0.629156066554265,0.483168241652012,0,0,0.810900861160657,0,0,0,0,0,0.147689527174577,0.100966449948148,0.228620419965,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0,0,1.35232715822533,1.68914227906064,0.73260649706906,0.214368379079066,4.01257683228291,1.12950368523413,2.76195141904306,1.14579102687879,0.171853182343688,1.37016503954128,0.755393897389701,1.35004500046361,2.2516060161211,1.35942722695261,1.55328093525546,0,0,0.341467211508268,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0.188626341386076,0.187283014939765,0.384150914429216,0.229741875822453,0,0.231768651889711,0,0.824171801606613,0.147198920134397,0,0,0,0,0.0941093804153306,0.338458431566706,0.365855945745545,0,0.271608227691724,0,0.711810108745045,0.197008964751127,0,0.154936841185966,0.385813221962283,0.249810577937946,0.233931608445408,0.644613162144895,0.191288332068843,0.220591419119515,0|short_description=p6@Cadps2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:320405 | |||
|HGNC= | |||
|MCL_coexpression_id=2002 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A4PI80,uniprot:A4PI81,uniprot:Q8BYR5 | |||
|association_with_transcript=-50bp_to_ENSMUST00000164608,NM_001252105,NM_001252106,NM_001252107,NM_001252108,NM_001252109,NM_001252110,NM_153163_5end | |||
|cluster_id=chr6:23789471..23789487,- | |||
|description=CAGE_peak_6_at_Cadps2_5end | |||
|id=chr6:23789471..23789487,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.89e-09!63;UBERON:0001049!7.86e-09!52;UBERON:0005068!7.86e-09!52;UBERON:0006241!7.86e-09!52;UBERON:0007135!7.86e-09!52;UBERON:0000955!2.24e-08!50;UBERON:0006238!2.24e-08!50;UBERON:0002616!4.04e-08!49;UBERON:0003080!6.02e-08!40;UBERON:0002780!1.01e-07!39;UBERON:0001890!1.01e-07!39;UBERON:0006240!1.01e-07!39;UBERON:0002346!1.19e-07!71;UBERON:0003075!1.19e-07!71;UBERON:0007284!1.19e-07!71;UBERON:0003056!1.64e-07!49;UBERON:0001017!4.43e-07!73;UBERON:0005743!4.43e-07!73;UBERON:0007023!5.27e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,3.16e-10,73;UBERON:0002021,2.62e-09,10;UBERON:0000411,2.62e-09,10;UBERON:0001950,2.62e-09,10;UBERON:0002616,1.26e-08,46;UBERON:0000073,2.33e-08,54;UBERON:0000955,2.44e-08,47;UBERON:0006238,2.44e-08,47;UBERON:0002346,2.47e-08,64;UBERON:0003075,2.47e-08,64;UBERON:0007284,2.47e-08,64;UBERON:0002780,3.23e-08,39;UBERON:0001890,3.23e-08,39;UBERON:0006240,3.23e-08,39;UBERON:0001049,5.98e-08,52;UBERON:0005068,5.98e-08,52;UBERON:0006241,5.98e-08,52;UBERON:0007135,5.98e-08,52;UBERON:0003080,6.59e-08,40;UBERON:0003056,8.23e-08,49;UBERON:0004121,8.58e-08,95;UBERON:0000924,8.58e-08,95;UBERON:0006601,8.58e-08,95 | |||
|phase1_expression=1.28119077683835,0,0,0.30246421130683,0.500895729946347,2.18243053485457,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.159992422793407,0.45881856213434,0,0.430761996159075,0.646413698057667,0.570070258369122,1.00812051903972,0.443461021310609,0,0,0,1.73310971850765,0.997407872150954,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.311068836925433,0,0.210324961351382,0,0.883474163806454,0,0.191690942036473,0,0,1.14918604276669,0.153606533256243,0.131886287730194,0.457438218012048,1.04182674111352,1.95428099300967,0.56276261003168,1.83357897332172,0.294628585473668,1.13897344639282,0.931997229126503,0,0,0.579728977403356,0.860423876981386,0,0,1.29955283489534,0.448026887097336,0.561777680527007,0,0,0,1.69012103732017,0,0,0,0.216491041011214,0,0,1.25602267690966,0,0,0,0.304465478312141,0.230615497256059,0,0.117588707135705,0.125666591329675,0.247194967734374,0,0,0,0,0,0,5.27005434620785,4.1889341362691,0.510914110417183,0,0,0,0.599162557619291,0.457500602818626,0.251308704225729,0.521472960576829,2.30143911597297,0.62336413367868,1.46017136760982,0.611036183101898,0.124406970610093,1.76905930903572,19.5710925974421,0,0,0,0.30140963567143,0.204109497453984,0.12811372028485,0.655912071918102,4.13925393182425,0.215567992932842,0.378212160335639,0.351902248327898,0.657587197282725,0.556094498451196,0,0,0.59710280045548,0,0,0,0.207125772535502,0,0,0,0,0,0,0.268273401399619,0,0.16455984991348,0,0,0,0,0,0.841159794256509,0.205809224758569,0.330418782983798,0.264450566663544,0,0,0,0,0.22237804384487,0.190225626112559,0.949058123089023,0.329397909448022,0.502670417600539,0.397912944082302,0.38992817423824,0,0.432276099749388,0.995706366271836,0.189667900953082,0.342745537829186,1.1270773567308,0.814605311381257,0.193952487167626,0.631222379012867,1.01178459398812,1.18088118383682,0.941992367048249,0.863780147452604,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0.554259570499814,0.37898282354097,0.488894929326078,0.509235257325564,1.17345124144251,1.67506257441816,0.952174563544055,1.36593553500459,0.788175720530955,0.44292937929755,0.956728611944923,0.491589944147214,0.172684981865896,1.44649058581512,0,0,2.45882136509518,1.37968373152366,0.481651769963376,0.703270119553219,0,0,0.315508219416257,0.390438744296638,1.72338718186239,0,0.222798674082394,0,0,0,0,0.642642632843614,0.283880170416537,0.534196811001766,0.162886959353576,0.494910368917606,1.32745138339963,0,0,0.377210159511796,0.295301892880773,0.614870295887855,0.775284879504663,1.09060118843252,0.356497378384721,0.632073515871632,1.05418608574999,2.06271086496374,4.42571487479924,0.720244376125241,0.388076051348264,0.857348140126369,1.77340233642274,1.07021290561242,1.81003922662333,1.522324745573,0,0,2.64634077665954,0.16488625294148,0,0.0603129249281559,0,0,0.291480836629851,0.18542530201051,0,0,0.185194527369712,0,0,0,0.849892149969277,0,0.552799895217695,0.954670618015114,0.158167996790568,0.406638934253697,0.108005340821801,1.25452977608681,0.87345025498471,1.34864346384821,1.32245529160537,1.30877970992015,0.388844919875379,8.69875038321696,0.56369293868419,0,0.165458490457098,0,0,0,0,0.13020438484395,0.629156066554265,0.483168241652012,0,0,0.810900861160657,0,0,0,0,0,0.147689527174577,0.100966449948148,0.228620419965,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0,0,1.35232715822533,1.68914227906064,0.73260649706906,0.214368379079066,4.01257683228291,1.12950368523413,2.76195141904306,1.14579102687879,0.171853182343688,1.37016503954128,0.755393897389701,1.35004500046361,2.2516060161211,1.35942722695261,1.55328093525546,0,0,0.341467211508268,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0.188626341386076,0.187283014939765,0.384150914429216,0.229741875822453,0,0.231768651889711,0,0.824171801606613,0.147198920134397,0,0,0,0,0.0941093804153306,0.338458431566706,0.365855945745545,0,0.271608227691724,0,0.711810108745045,0.197008964751127,0,0.154936841185966,0.385813221962283,0.249810577937946,0.233931608445408,0.644613162144895,0.191288332068843,0.220591419119515,0 | |||
|short_description=p6@Cadps2 | |||
}} |
Revision as of 12:09, 5 August 2015
Short description: | p6@Cadps2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Cadps2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2002 |
Association with transcript: | -50bp_to_ENSMUST00000164608, NM_001252105, NM_001252106, NM_001252107, NM_001252108, NM_001252109, NM_001252110, NM_153163_5end |
EntrezGene: | 320405 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 3.16e-10 | 73 |
occipital lobe | 2.62e-09 | 10 |
visual cortex | 2.62e-09 | 10 |
neocortex | 2.62e-09 | 10 |
regional part of brain | 1.26e-08 | 46 |
regional part of nervous system | 2.33e-08 | 54 |
brain | 2.44e-08 | 47 |
future brain | 2.44e-08 | 47 |
neurectoderm | 2.47e-08 | 64 |
neural plate | 2.47e-08 | 64 |
presumptive neural plate | 2.47e-08 | 64 |
regional part of forebrain | 3.23e-08 | 39 |
forebrain | 3.23e-08 | 39 |
future forebrain | 3.23e-08 | 39 |
neural tube | 5.98e-08 | 52 |
neural rod | 5.98e-08 | 52 |
future spinal cord | 5.98e-08 | 52 |
neural keel | 5.98e-08 | 52 |
anterior neural tube | 6.59e-08 | 40 |
pre-chordal neural plate | 8.23e-08 | 49 |
ectoderm-derived structure | 8.58e-08 | 95 |
ectoderm | 8.58e-08 | 95 |
presumptive ectoderm | 8.58e-08 | 95 |