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FFCP PHASE1:Mm9::chr4:56815114..56815134,-: Difference between revisions

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{{FFCP|EntrezGene=230233|HGNC=|UniProt=Q7TT37|association_with_transcript=68bp_to_ENSMUST00000030140,NM_026079,uc012del.1_5end|description=CAGE_peak_2_at_Ikbkap_5end|id=chr4:56815114..56815134,-|ontology_enrichment_celltype=CL:0000117!3.55e-08!23;CL:0000337!3.55e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,5.17e-09,23;CL:0000337,5.17e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.35e-14!52;UBERON:0005068!6.35e-14!52;UBERON:0006241!6.35e-14!52;UBERON:0007135!6.35e-14!52;UBERON:0003056!7.52e-14!49;UBERON:0000153!2.47e-13!94;UBERON:0003080!2.96e-13!40;UBERON:0000033!5.32e-13!63;UBERON:0002780!5.40e-13!39;UBERON:0001890!5.40e-13!39;UBERON:0006240!5.40e-13!39;UBERON:0002616!1.61e-12!49;UBERON:0000955!2.75e-12!50;UBERON:0006238!2.75e-12!50;UBERON:0002346!1.56e-11!71;UBERON:0003075!1.56e-11!71;UBERON:0007284!1.56e-11!71;UBERON:0007811!2.77e-11!86;UBERON:0001017!3.54e-11!73;UBERON:0005743!3.54e-11!73;UBERON:0000073!1.05e-10!75;UBERON:0001016!1.05e-10!75;UBERON:0002020!1.88e-10!34;UBERON:0002791!5.07e-09!29;UBERON:0003528!5.07e-09!29;UBERON:0001893!5.07e-09!29;UBERON:0004121!1.01e-08!102;UBERON:0000924!1.01e-08!102;UBERON:0006601!1.01e-08!102|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.09e-15,54;UBERON:0001049,1.56e-15,52;UBERON:0005068,1.56e-15,52;UBERON:0006241,1.56e-15,52;UBERON:0007135,1.56e-15,52;UBERON:0003056,1.68e-15,49;UBERON:0002346,8.27e-15,64;UBERON:0003075,8.27e-15,64;UBERON:0007284,8.27e-15,64;UBERON:0003080,1.50e-14,40;UBERON:0002780,2.96e-14,39;UBERON:0001890,2.96e-14,39;UBERON:0006240,2.96e-14,39;UBERON:0002616,9.04e-14,46;UBERON:0010371,4.40e-13,73;UBERON:0000955,4.43e-13,47;UBERON:0006238,4.43e-13,47;UBERON:0001017,7.89e-12,73;UBERON:0002020,2.10e-11,34;UBERON:0001016,6.45e-11,75;UBERON:0003528,8.52e-10,29;UBERON:0002791,8.52e-10,29;UBERON:0001893,8.52e-10,29;UBERON:0004121,8.55e-10,95;UBERON:0000924,8.55e-10,95;UBERON:0006601,8.55e-10,95;UBERON:0010314,1.64e-09,92|phase1_expression=2.24208385946712,0,0,0.30246421130683,0.500895729946347,0.671517087647559,0.467225281191051,1.93684985162364,10.8407316056783,10.0647746318457,2.73948749160808,3.35043067780413,2.56801094896809,2.62261207256992,0.666219523631325,0,0,0.946386496074713,1.09691546884591,1.69755860719212,0.765389611359628,1.68794617041505,0.522399578277871,0.95995453676044,0,0.57423196411502,0,0.215471232685889,0,0.252030129759931,0.221730510655305,1.90509202037889,3.69038872550742,0,2.02196133825892,0.997407872150954,1.02084678131185,0.837063261473815,0,0,2.94115744015507,0.683045484958446,0.971020706062307,0.755380907853464,0.608261587317087,0.550640256485045,0,0.65407546914134,0.219686182734472,0.777719596297134,0.699932108126813,0,1.67782606057736,0.725362142011344,2.68875039313971,1.02903774414379,0,1.03134418455488,2.83243045203437,4.23192783417626,3.80298842103708,0,0,0,0,0.7104801149461,0,0.768436610643109,1.8664130215526,1.89008313664367,1.89292465216244,2.57085885963423,2.20868540951614,2.69479758272899,2.30029130443767,4.5960939330501,1.10115880999389,1.78762273319263,1.84327839907492,3.82470234417562,5.30628332893976,5.73004707612436,3.07101298901519,2.8138130501584,1.06958773443767,2.35702868378934,2.84743361598206,1.67759501242771,0.984440513331393,0.604572480854284,1.73918693221007,0,2.719885334831,0.539703191637817,1.29955283489534,0,0.421333260395256,0.681721290312231,0.519572009205738,0.35333957451034,2.67602497575693,0,0,0,3.030874574157,2.78695852022608,2.02209778005913,0.5709193985953,0.517875767294343,0.29688427812965,1.56136794089522,0.608930956624282,0.461230994512117,0.904335843315735,1.88141931417128,0.376999773989026,0.494389935468748,0.433798070759735,0.884610551949874,0.970601099684455,0.883366073841574,0.484875253135222,0,2.34224637609238,1.25668024088073,0.255457055208591,1.7972268675888,0.599902730993408,1.52484272487678,2.09706895166752,1.83000241127451,4.77486538028885,2.43354048269187,3.3243009452943,1.24672826735736,3.89379031362618,1.73126918545538,0.248813941220186,0.505445516867349,0.210441855886474,4.42409506073193,1.83921683546778,1.98068342785884,2.10986744970001,2.04109497453984,1.92170580427275,1.68663104207512,1.03481348295606,4.52692785158969,5.29497024469894,3.34307135911503,3.28793598641362,3.89266148915837,1.39300866608867,1.23469281844766,2.7864797354589,1.40442637462647,2.31613116403244,1.42081749697796,2.27838349789052,2.57978665979206,2.52086886045421,0.473489471170421,1.96764231747404,0.925602677324269,0.232533944750408,1.07309360559848,0.583826711835847,0.658239399653922,1.14917224855367,0.648550476366846,0.584799949701329,0.878200461164203,0.134206418760372,0.630869845692382,4.21908910755066,0.330418782983798,0.528901133327089,3.83918850963421,2.09013004674395,2.31961430379768,0.605050573870028,0.444756087689741,0.380451252225118,0,0.658795818896044,1.25667604400135,0.795825888164603,0.19496408711912,0.898819408654221,0,0.597423819763102,2.0863469104839,2.17072173958485,0,1.4255592949172,0.77580994867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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:230233
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q7TT37
|association_with_transcript=68bp_to_ENSMUST00000030140,NM_026079,uc012del.1_5end
|cluster_id=chr4:56815114..56815134,-
|description=CAGE_peak_2_at_Ikbkap_5end
|id=chr4:56815114..56815134,-
|ontology_enrichment_celltype=CL:0000117!3.55e-08!23;CL:0000337!3.55e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,5.17e-09,23;CL:0000337,5.17e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!6.35e-14!52;UBERON:0005068!6.35e-14!52;UBERON:0006241!6.35e-14!52;UBERON:0007135!6.35e-14!52;UBERON:0003056!7.52e-14!49;UBERON:0000153!2.47e-13!94;UBERON:0003080!2.96e-13!40;UBERON:0000033!5.32e-13!63;UBERON:0002780!5.40e-13!39;UBERON:0001890!5.40e-13!39;UBERON:0006240!5.40e-13!39;UBERON:0002616!1.61e-12!49;UBERON:0000955!2.75e-12!50;UBERON:0006238!2.75e-12!50;UBERON:0002346!1.56e-11!71;UBERON:0003075!1.56e-11!71;UBERON:0007284!1.56e-11!71;UBERON:0007811!2.77e-11!86;UBERON:0001017!3.54e-11!73;UBERON:0005743!3.54e-11!73;UBERON:0000073!1.05e-10!75;UBERON:0001016!1.05e-10!75;UBERON:0002020!1.88e-10!34;UBERON:0002791!5.07e-09!29;UBERON:0003528!5.07e-09!29;UBERON:0001893!5.07e-09!29;UBERON:0004121!1.01e-08!102;UBERON:0000924!1.01e-08!102;UBERON:0006601!1.01e-08!102
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.09e-15,54;UBERON:0001049,1.56e-15,52;UBERON:0005068,1.56e-15,52;UBERON:0006241,1.56e-15,52;UBERON:0007135,1.56e-15,52;UBERON:0003056,1.68e-15,49;UBERON:0002346,8.27e-15,64;UBERON:0003075,8.27e-15,64;UBERON:0007284,8.27e-15,64;UBERON:0003080,1.50e-14,40;UBERON:0002780,2.96e-14,39;UBERON:0001890,2.96e-14,39;UBERON:0006240,2.96e-14,39;UBERON:0002616,9.04e-14,46;UBERON:0010371,4.40e-13,73;UBERON:0000955,4.43e-13,47;UBERON:0006238,4.43e-13,47;UBERON:0001017,7.89e-12,73;UBERON:0002020,2.10e-11,34;UBERON:0001016,6.45e-11,75;UBERON:0003528,8.52e-10,29;UBERON:0002791,8.52e-10,29;UBERON:0001893,8.52e-10,29;UBERON:0004121,8.55e-10,95;UBERON:0000924,8.55e-10,95;UBERON:0006601,8.55e-10,95;UBERON:0010314,1.64e-09,92
|phase1_expression=2.24208385946712,0,0,0.30246421130683,0.500895729946347,0.671517087647559,0.467225281191051,1.93684985162364,10.8407316056783,10.0647746318457,2.73948749160808,3.35043067780413,2.56801094896809,2.62261207256992,0.666219523631325,0,0,0.946386496074713,1.09691546884591,1.69755860719212,0.765389611359628,1.68794617041505,0.522399578277871,0.95995453676044,0,0.57423196411502,0,0.215471232685889,0,0.252030129759931,0.221730510655305,1.90509202037889,3.69038872550742,0,2.02196133825892,0.997407872150954,1.02084678131185,0.837063261473815,0,0,2.94115744015507,0.683045484958446,0.971020706062307,0.755380907853464,0.608261587317087,0.550640256485045,0,0.65407546914134,0.219686182734472,0.777719596297134,0.699932108126813,0,1.67782606057736,0.725362142011344,2.68875039313971,1.02903774414379,0,1.03134418455488,2.83243045203437,4.23192783417626,3.80298842103708,0,0,0,0,0.7104801149461,0,0.768436610643109,1.8664130215526,1.89008313664367,1.89292465216244,2.57085885963423,2.20868540951614,2.69479758272899,2.30029130443767,4.5960939330501,1.10115880999389,1.78762273319263,1.84327839907492,3.82470234417562,5.30628332893976,5.73004707612436,3.07101298901519,2.8138130501584,1.06958773443767,2.35702868378934,2.84743361598206,1.67759501242771,0.984440513331393,0.604572480854284,1.73918693221007,0,2.719885334831,0.539703191637817,1.29955283489534,0,0.421333260395256,0.681721290312231,0.519572009205738,0.35333957451034,2.67602497575693,0,0,0,3.030874574157,2.78695852022608,2.02209778005913,0.5709193985953,0.517875767294343,0.29688427812965,1.56136794089522,0.608930956624282,0.461230994512117,0.904335843315735,1.88141931417128,0.376999773989026,0.494389935468748,0.433798070759735,0.884610551949874,0.970601099684455,0.883366073841574,0.484875253135222,0,2.34224637609238,1.25668024088073,0.255457055208591,1.7972268675888,0.599902730993408,1.52484272487678,2.09706895166752,1.83000241127451,4.77486538028885,2.43354048269187,3.3243009452943,1.24672826735736,3.89379031362618,1.73126918545538,0.248813941220186,0.505445516867349,0.210441855886474,4.42409506073193,1.83921683546778,1.98068342785884,2.10986744970001,2.04109497453984,1.92170580427275,1.68663104207512,1.03481348295606,4.52692785158969,5.29497024469894,3.34307135911503,3.28793598641362,3.89266148915837,1.39300866608867,1.23469281844766,2.7864797354589,1.40442637462647,2.31613116403244,1.42081749697796,2.27838349789052,2.57978665979206,2.52086886045421,0.473489471170421,1.96764231747404,0.925602677324269,0.232533944750408,1.07309360559848,0.583826711835847,0.658239399653922,1.14917224855367,0.648550476366846,0.584799949701329,0.878200461164203,0.134206418760372,0.630869845692382,4.21908910755066,0.330418782983798,0.528901133327089,3.83918850963421,2.09013004674395,2.31961430379768,0.605050573870028,0.444756087689741,0.380451252225118,0,0.658795818896044,1.25667604400135,0.795825888164603,0.19496408711912,0.898819408654221,0,0.597423819763102,2.0863469104839,2.17072173958485,0,1.4255592949172,0.775809948670503,1.1221731182451,0.442655759869801,1.03327103585722,0.31399745568275,0.493588655687202,0.592905254174298,1.16791574001266,0.982794975566015,1.12431056192427,0.405720242777006,0.241177159752417,0.25462585178142,0.575392274901621,0.810676133875177,0.823684239564244,0,0.372140947668503,0.624075346229121,0.505157755894224,0.358794827043824,0.482443521363367,0.554259570499814,2.4633883530163,1.62964976442026,1.69745085775188,0.938760993154008,0.837531287209079,0.476087281772027,0.390267295715598,0.315270288212382,1.55025282754142,0.637819074629948,0.491589944147214,0.518054945597687,0.433947175744535,0,0,0.491764273019036,1.93155722413313,2.24770825982909,1.75817529888305,1.80328439914343,0.757412781613119,0.631016438832513,0.780877488593277,0.861693590931196,0.477937595905104,1.55959071857676,0,0.809621403349789,1.46127928955656,1.97643888973262,0.963963949265421,0.567760340833074,2.13678724400706,1.46598263418218,1.15479086080775,0,2.91336763385978,1.81394134178851,0.754420319023592,1.18120757152309,0.922305443831782,2.32585463851399,1.45413491791002,0.712994756769443,1.26414703174326,0,2.06271086496374,2.04263763452273,3.96134406868882,3.62204314591713,3.21505552547388,3.3694644392032,3.74574516964348,2.46823530903181,2.74018454203139,0.938686832254841,0,1.10264199027481,0.16488625294148,0.968786560175433,1.38719727334758,0.954978752025092,0.656563598980245,0.291480836629851,1.48340241608408,0.512612642393558,1.03193433981611,0.555583582109135,0.376736914009382,0.546776910884101,0.457556346413045,4.58941760983409,2.23922323717853,3.04039942369732,0,5.21954389408873,1.01659733563424,1.18805874903981,2.71814784818809,1.52853794622324,1.21377911746339,0.661227645802687,0.523511883968059,0.388844919875379,0.621339313086926,0.56369293868419,3.43888055901151,2.15096037594227,1.55560950675238,1.29159823477731,1.85851738039856,1.76035857968631,2.3436789271911,4.8235298435827,2.89900944991207,0.864090018773596,0.632022241256357,1.21635129174099,1.95150818613172,1.29920822977795,1.07416017400489,0.198681354781265,1.68273629327956,0.590758108698309,0.605798699688886,1.06689529317,1.31074040677893,1.07203668813728,1.34696578296461,0.233753804363138,0.680191150845634,1.77588762699252,3.05027112472217,2.3503846290971,0.19318959403219,0.93841237725591,0.36630324853453,1.07184189539533,1.00314420807073,4.51801474093653,2.30162618253588,4.01026859407578,4.98374228796694,6.16574267793578,1.5107877947794,2.70009000092722,1.80128481289688,4.07828168085784,3.62432218226274,4.98179268404048,1.99512436700516,3.24393850932855,1.94485373654635,1.88651846365184,1.2869045591501,1.55572709461131,1.44224540067226,0.320919209591815,1.01078884705519,1.01391719956096,0.943131706930381,1.31098110457835,0.768301828858431,1.37845125493472,0.476293691283074,0.927074607558844,1.15745532278223,3.29668720642645,1.47198920134397,0.685738504770831,1.4198064492747,0.476872379894642,1.74415699958794,0.658765662907314,2.03075058940024,1.46342378298218,1.31534855718921,0.950628796921032,1.12228454331548,0.830445126869219,0.886540341380071,1.63692417267876,1.08455788830176,0.578719832943424,0.749431733813838,0.935726433781634,1.07435527024149,0.765153328275374,0.882365676478062,0.231867835620421
|short_description=p2@Ikbkap
}}

Revision as of 14:48, 5 August 2015

Short description:p2@Ikbkap
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ikbkap_5end
Coexpression cluster:NA
Association with transcript: 68bp_to_ENSMUST00000030140, NM_026079, uc012del.1_5end
EntrezGene:230233
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ikbkap

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E710.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F210.06
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.74
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.35
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.57
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.62
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.30
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.82
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.31
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.80
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.52
corpora quadrigemina, adult.CNhs10501.16-22A42.10
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F14.77
cortex, adult.CNhs10473.12-14D52.43
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B23.89
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C64.42
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C62.04
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G81.69
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E24.53
forelimb, embryo E12.CNhs10600.359-14H25.29
forelimb, embryo E13.CNhs10589.384-1E23.34
forelimb, embryo E14.CNhs10577.413-26A83.29
forelimb, embryo E15.CNhs11007.437-20E73.89
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G14.22
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I53.84
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D82.32
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F82.17
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G71.12
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G22.46
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A31.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.80
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H72.14
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E63.96
pituitary gland, embryo E13.CNhs11009.370-44C73.62
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B93.37
pituitary gland, embryo E16.CNhs11036.449-43F63.75
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H31.39
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.59
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.04
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E35.22
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F53.44
testis, embryo E15.CNhs11034.443-27C52.15
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I42.34
testis, neonate N10.CNhs11204.763-44D94.82
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I21.95
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F81.68
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D31.07
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G71.35
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.05
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.35
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I84.98
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.17e-0923
neuroblast (sensu Vertebrata)5.17e-0923

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.09e-1554
neural tube1.56e-1552
neural rod1.56e-1552
future spinal cord1.56e-1552
neural keel1.56e-1552
pre-chordal neural plate1.68e-1549
neurectoderm8.27e-1564
neural plate8.27e-1564
presumptive neural plate8.27e-1564
anterior neural tube1.50e-1440
regional part of forebrain2.96e-1439
forebrain2.96e-1439
future forebrain2.96e-1439
regional part of brain9.04e-1446
ecto-epithelium4.40e-1373
brain4.43e-1347
future brain4.43e-1347
central nervous system7.89e-1273
gray matter2.10e-1134
nervous system6.45e-1175
brain grey matter8.52e-1029
regional part of telencephalon8.52e-1029
telencephalon8.52e-1029
ectoderm-derived structure8.55e-1095
ectoderm8.55e-1095
presumptive ectoderm8.55e-1095
structure with developmental contribution from neural crest1.64e-0992
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