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FFCP PHASE1:Mm9::chr3:138738080..138738096,-: Difference between revisions

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{{FFCP|EntrezGene=229877|HGNC=|MCL_coexpression_id=1|UniProt=E9Q6Q4,E9Q912,Q3TPS9,Q3TA69,Q3TU36,Q8BKH0,Q3TYN8|association_with_transcript=66bp_to_ENSMUST00000029796,ENSMUST00000098574,NM_001040690,NM_145544,uc008rnr.1,uc008rns.1,uc008rnt.1,uc008rnu.1,uc008rnv.1,uc008rnw.1,uc008rnx.1_5end|description=CAGE_peak_3_at_Rap1gds1_5end|id=chr3:138738080..138738096,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.68e-09!75;UBERON:0001016!1.68e-09!75;UBERON:0001049!2.03e-09!52;UBERON:0005068!2.03e-09!52;UBERON:0006241!2.03e-09!52;UBERON:0007135!2.03e-09!52;UBERON:0000955!7.46e-09!50;UBERON:0006238!7.46e-09!50;UBERON:0001017!8.83e-09!73;UBERON:0005743!8.83e-09!73;UBERON:0002616!2.51e-08!49;UBERON:0002020!7.00e-08!34;UBERON:0002021!9.29e-08!10;UBERON:0000411!9.29e-08!10;UBERON:0001950!9.29e-08!10;UBERON:0002346!1.37e-07!71;UBERON:0003075!1.37e-07!71;UBERON:0007284!1.37e-07!71;UBERON:0004121!3.68e-07!102;UBERON:0000924!3.68e-07!102;UBERON:0006601!3.68e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.29e-10,54;UBERON:0001049,1.54e-09,52;UBERON:0005068,1.54e-09,52;UBERON:0006241,1.54e-09,52;UBERON:0007135,1.54e-09,52;UBERON:0001016,2.44e-09,75;UBERON:0001017,1.33e-08,73;UBERON:0002021,4.61e-08,10;UBERON:0000411,4.61e-08,10;UBERON:0001950,4.61e-08,10;UBERON:0002020,9.03e-08,34;UBERON:0002346,1.15e-07,64;UBERON:0003075,1.15e-07,64;UBERON:0007284,1.15e-07,64;UBERON:0000955,1.86e-07,47;UBERON:0006238,1.86e-07,47;UBERON:0002616,5.99e-07,46;UBERON:0010371,7.37e-07,73;UBERON:0004121,9.04e-07,95;UBERON:0000924,9.04e-07,95;UBERON:0006601,9.04e-07,95|phase1_expression=1.12104192973356,0.348975407639361,1.81999695755814,3.0246421130683,2.50447864973174,1.34303417529512,0.700837921786577,2.84071311571468,4.08287294239834,5.61754863172784,0.68487187290202,0.8774937489487,1.88320802924326,1.22388563386596,0.666219523631325,0.607425802169478,0,1.10411757875383,1.64537320326887,0,3.74190476664707,0.794327609607082,1.04479915655574,0.639969691173627,1.83527424853736,1.72269589234506,1.7230479846363,1.07735616342945,0.570070258369122,1.51218077855958,0.886922042621219,0.635030673459631,0,0,0.288851619751275,0.332469290716985,0.204169356262369,4.18531630736908,3.1253413780952,3.14114246384279,4.1176204162171,1.36609096991689,5.34061388334269,1.51076181570693,1.52065396829272,1.46837401729345,1.56478268869608,0.872100625521786,0.878744730937887,1.74986909166855,1.25987779462826,1.43752564364972,1.51004345451963,2.17608642603403,1.68046899571232,1.02903774414379,1.14613375975503,2.06268836910977,1.01158230429799,0.528990979272033,0.633831403506179,1.69422266034566,1.77858959222228,0.449949858640699,1.97773272513395,2.1314403448383,0.599200221036809,0.768436610643109,2.07379224616955,1.35005938331691,0.841299845405528,3.99911378165325,3.09215957332259,1.22490799214954,0.383381884072945,0.919218786610021,6.60695285996332,13.9179198512855,9.5236050618871,0.395658863190582,0.823388792421687,1.04182674111352,6.42120897703176,4.50210088025344,4.73674568108111,4.71405736757868,4.27115042397309,3.91438836233131,3.48340489332647,2.79614772395106,3.76823835312181,0,1.3599426674155,0.539703191637817,1.29955283489534,0.448026887097336,1.26399978118577,2.21559419351475,1.29893002301434,1.06001872353102,2.25349471642689,0,2.54805239706646,0,0.865964164044856,0.506719730950197,1.51657333504435,1.37020655662872,6.21450920753212,1.7813056687779,2.25530924795977,0.608930956624282,1.15307748628029,1.95939432718409,1.41106448562846,1.13099932196708,1.73036477414062,1.73519228303894,0.884610551949874,1.7794353494215,1.54589062922275,0.484875253135222,1.86391761218122,2.92780797011547,1.67557365450764,2.29911349687732,0.599075622529601,0,0.508280908292259,7.63932260964596,5.03250663100489,2.26177833803156,11.298580812498,17.1329356411321,9.76603809429932,10.707923362472,0.509196819251581,1.36847667671102,1.0108910337347,1.26265113531884,0.780722657776222,0.459804208866946,0.360124259610698,1.9591626318643,0.816437989815934,1.5373646434182,0.562210347358373,3.62184719034622,0.862271971731369,0.189106080167819,0.703804496655795,1.09597866213787,2.50242524303038,2.43776516565517,1.64625709126355,0.796137067273973,0,0.257347907114715,0.852490498186778,0.414251545071004,0.469052119962192,0.720248245844059,1.65721314909647,0.983821158737019,2.31400669331067,0.465067889500816,1.60964040839772,0.467061369468678,1.48103864922132,1.47750717671186,1.29710095273369,1.02339991197733,1.97595103761946,1.07365135008297,8.20130799400096,1.3377599609307,2.31293148088659,1.58670339998127,2.34617075588757,1.85789337488351,1.41754207454303,1.00841762311671,0.667134131534611,1.90225626112559,1.42358718463353,0.988193728344065,0.754005626400808,0.795825888164603,0.38992817423824,0,3.24207074812041,1.99141273254367,0.569003702859245,0.571242563048644,0,0.407302655690628,1.55161989734101,0.771494018793504,1.20149420536089,1.77132177575523,1.09899109488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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:229877
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=uniprot:E9Q6Q4,uniprot:E9Q912,uniprot:Q3TPS9,uniprot:Q3TA69,uniprot:Q3TU36,uniprot:Q8BKH0,uniprot:Q3TYN8
|association_with_transcript=66bp_to_ENSMUST00000029796,ENSMUST00000098574,NM_001040690,NM_145544,uc008rnr.1,uc008rns.1,uc008rnt.1,uc008rnu.1,uc008rnv.1,uc008rnw.1,uc008rnx.1_5end
|cluster_id=chr3:138738080..138738096,-
|description=CAGE_peak_3_at_Rap1gds1_5end
|id=chr3:138738080..138738096,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.68e-09!75;UBERON:0001016!1.68e-09!75;UBERON:0001049!2.03e-09!52;UBERON:0005068!2.03e-09!52;UBERON:0006241!2.03e-09!52;UBERON:0007135!2.03e-09!52;UBERON:0000955!7.46e-09!50;UBERON:0006238!7.46e-09!50;UBERON:0001017!8.83e-09!73;UBERON:0005743!8.83e-09!73;UBERON:0002616!2.51e-08!49;UBERON:0002020!7.00e-08!34;UBERON:0002021!9.29e-08!10;UBERON:0000411!9.29e-08!10;UBERON:0001950!9.29e-08!10;UBERON:0002346!1.37e-07!71;UBERON:0003075!1.37e-07!71;UBERON:0007284!1.37e-07!71;UBERON:0004121!3.68e-07!102;UBERON:0000924!3.68e-07!102;UBERON:0006601!3.68e-07!102
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.29e-10,54;UBERON:0001049,1.54e-09,52;UBERON:0005068,1.54e-09,52;UBERON:0006241,1.54e-09,52;UBERON:0007135,1.54e-09,52;UBERON:0001016,2.44e-09,75;UBERON:0001017,1.33e-08,73;UBERON:0002021,4.61e-08,10;UBERON:0000411,4.61e-08,10;UBERON:0001950,4.61e-08,10;UBERON:0002020,9.03e-08,34;UBERON:0002346,1.15e-07,64;UBERON:0003075,1.15e-07,64;UBERON:0007284,1.15e-07,64;UBERON:0000955,1.86e-07,47;UBERON:0006238,1.86e-07,47;UBERON:0002616,5.99e-07,46;UBERON:0010371,7.37e-07,73;UBERON:0004121,9.04e-07,95;UBERON:0000924,9.04e-07,95;UBERON:0006601,9.04e-07,95
|phase1_expression=1.12104192973356,0.348975407639361,1.81999695755814,3.0246421130683,2.50447864973174,1.34303417529512,0.700837921786577,2.84071311571468,4.08287294239834,5.61754863172784,0.68487187290202,0.8774937489487,1.88320802924326,1.22388563386596,0.666219523631325,0.607425802169478,0,1.10411757875383,1.64537320326887,0,3.74190476664707,0.794327609607082,1.04479915655574,0.639969691173627,1.83527424853736,1.72269589234506,1.7230479846363,1.07735616342945,0.570070258369122,1.51218077855958,0.886922042621219,0.635030673459631,0,0,0.288851619751275,0.332469290716985,0.204169356262369,4.18531630736908,3.1253413780952,3.14114246384279,4.1176204162171,1.36609096991689,5.34061388334269,1.51076181570693,1.52065396829272,1.46837401729345,1.56478268869608,0.872100625521786,0.878744730937887,1.74986909166855,1.25987779462826,1.43752564364972,1.51004345451963,2.17608642603403,1.68046899571232,1.02903774414379,1.14613375975503,2.06268836910977,1.01158230429799,0.528990979272033,0.633831403506179,1.69422266034566,1.77858959222228,0.449949858640699,1.97773272513395,2.1314403448383,0.599200221036809,0.768436610643109,2.07379224616955,1.35005938331691,0.841299845405528,3.99911378165325,3.09215957332259,1.22490799214954,0.383381884072945,0.919218786610021,6.60695285996332,13.9179198512855,9.5236050618871,0.395658863190582,0.823388792421687,1.04182674111352,6.42120897703176,4.50210088025344,4.73674568108111,4.71405736757868,4.27115042397309,3.91438836233131,3.48340489332647,2.79614772395106,3.76823835312181,0,1.3599426674155,0.539703191637817,1.29955283489534,0.448026887097336,1.26399978118577,2.21559419351475,1.29893002301434,1.06001872353102,2.25349471642689,0,2.54805239706646,0,0.865964164044856,0.506719730950197,1.51657333504435,1.37020655662872,6.21450920753212,1.7813056687779,2.25530924795977,0.608930956624282,1.15307748628029,1.95939432718409,1.41106448562846,1.13099932196708,1.73036477414062,1.73519228303894,0.884610551949874,1.7794353494215,1.54589062922275,0.484875253135222,1.86391761218122,2.92780797011547,1.67557365450764,2.29911349687732,0.599075622529601,0,0.508280908292259,7.63932260964596,5.03250663100489,2.26177833803156,11.298580812498,17.1329356411321,9.76603809429932,10.707923362472,0.509196819251581,1.36847667671102,1.0108910337347,1.26265113531884,0.780722657776222,0.459804208866946,0.360124259610698,1.9591626318643,0.816437989815934,1.5373646434182,0.562210347358373,3.62184719034622,0.862271971731369,0.189106080167819,0.703804496655795,1.09597866213787,2.50242524303038,2.43776516565517,1.64625709126355,0.796137067273973,0,0.257347907114715,0.852490498186778,0.414251545071004,0.469052119962192,0.720248245844059,1.65721314909647,0.983821158737019,2.31400669331067,0.465067889500816,1.60964040839772,0.467061369468678,1.48103864922132,1.47750717671186,1.29710095273369,1.02339991197733,1.97595103761946,1.07365135008297,8.20130799400096,1.3377599609307,2.31293148088659,1.58670339998127,2.34617075588757,1.85789337488351,1.41754207454303,1.00841762311671,0.667134131534611,1.90225626112559,1.42358718463353,0.988193728344065,0.754005626400808,0.795825888164603,0.38992817423824,0,3.24207074812041,1.99141273254367,0.569003702859245,0.571242563048644,0,0.407302655690628,1.55161989734101,0.771494018793504,1.20149420536089,1.77132177575523,1.09899109488962,1.35736880313981,2.37162101669719,1.00107063429656,0.982794975566015,0.899448449539415,0,0.72353147925725,1.2731292589071,1.43848068725405,0.486405680325106,1.64736847912849,0,1.11642284300551,2.18426371180192,2.02063102357689,1.61457672169721,0.964887042726734,1.29327233116623,1.13694847062291,1.46668478797823,1.52770577197669,2.34690248288502,1.67506257441816,1.19021820443007,1.95133647857799,1.26108115284953,1.10732344824387,1.2756381492599,1.3109065177259,1.55416483679306,0.723245292907558,0,3.26343410291226,2.95058563811422,1.37968373152366,9.31193421929193,10.9006868530749,1.3114795630134,2.27223834483936,2.83957397474631,1.95219372148319,0.861693590931196,0.955875191810208,1.11399337041197,0.566153061577665,1.61924280669958,2.33804686329049,2.37172666767914,17.0300297703558,1.84522110770749,0.890328018336276,0.651547837414304,2.63952196756057,1.32745138339963,0.728341908464944,0.604647113929502,0.943025398779491,0,0.307435147943927,1.80899805217755,0.727067458955011,0.712994756769443,1.26414703174326,3.16255825724996,0,0.340439605753788,0.36012218806262,1.29358683782755,1.50035924522115,1.06404140185364,2.31879462882692,1.81003922662333,1.2178597964584,1.87737366450968,1.27099242518292,1.32317038832977,0.49465875882444,1.29171541356724,1.44751019827574,0.954978752025092,0.492422699235184,2.91480836629851,9.08583979851498,1.53783792718067,0.82554747185289,1.11116716421827,1.31857919903284,1.36694227721025,2.0590035588587,2.03974115992626,1.81936888020755,1.79659965945751,1.90934123603023,0.790839983952838,2.03319467126849,1.51207477150522,1.46361807210128,1.9652630737156,1.34864346384821,1.48776220305605,1.57053565190418,1.29614973291793,0.621339313086926,0,1.49516546043979,0.827292452285488,0,0.774958940866387,2.02747350588934,1.05621514781179,0.781226309063701,0.524296722128554,0.483168241652012,0.288030006257865,1.26404448251271,2.43270258348197,0.718976700153791,1.68897069871134,1.9692936523423,1.19208812868759,0.841368146639782,0.443068581523732,1.00966449948148,0.457240839929999,0.604957110821043,1.26695244961678,0.962118416403295,0.233753804363138,0.906921534460845,0.221985953374065,0.807424709485281,0.839423081820392,0.965947970160952,2.43987218086537,0.915758121336325,1.2862102744744,0.501572104035363,18.0720589637461,13.8097570952153,13.7494923225455,14.2638141345261,10.2762377965596,8.3093328712867,7.42524750254986,7.65546045481175,9.06284817968409,9.31968561153276,0.62272408550506,1.59609949360412,1.02440163452481,1.70174701947806,1.46729213839588,0.919217542250071,0.888986911206461,0.824140228955577,0.962757628775446,1.01078884705519,1.01391719956096,1.13175804831646,1.96647165686753,1.28050304809739,1.32101578597911,0.952587382566147,1.39061191133827,0.77163688185482,0.824171801606613,1.17759136107518,0.685738504770831,0.532427418478012,2.38436189947321,0.872078499793971,0.752875043322645,1.69229215783353,1.28049581010941,1.57841826862706,1.62964936615034,0.561142271657738,1.42362021749009,0.886540341380071,0.409231043169689,1.08455788830176,2.50778594275484,1.24905288968973,2.10538447600868,1.71896843238639,0.191288332068843,1.76473135295612,1.39120701372253
|short_description=p3@Rap1gds1
}}

Revision as of 03:14, 6 August 2015

Short description:p3@Rap1gds1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rap1gds1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 66bp_to_ENSMUST00000029796, ENSMUST00000098574, NM_001040690, NM_145544, uc008rnr.1, uc008rns.1, uc008rnt.1, uc008rnu.1, uc008rnv.1, uc008rnw.1, uc008rnx.1_5end
EntrezGene:229877
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Rap1gds1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.08
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.88
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.88
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.22
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.65
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.34
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F313.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.52
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D93.48
Mouse Schwann, donor2.CNhs12573.11746-123F92.80
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H96.21
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H11.74
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A47.64
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F12.26
cortex, adult.CNhs10473.12-14D511.30
cortex, neonate N30.CNhs11107.1392-42F217.13
diencephalon, adult.CNhs10482.20-12F29.77
diencephalon, neonate N30.CNhs11201.1388-42B210.71
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C62.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G11.30
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E88.20
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F71.90
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E33.24
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D51.20
kidney, neonate N20.CNhs11113.832-19I11.77
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H11.36
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B62.35
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C29.31
medulla oblongata, neonate N30.CNhs11200.1396-42A310.90
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I917.03
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H31.45
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C99.09
spleen, adult.CNhs10465.25-2G21.54
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H11.37
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.80
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I11.30
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I42.43
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A118.07
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.26
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.06
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.32
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.29e-1054
neural tube1.54e-0952
neural rod1.54e-0952
future spinal cord1.54e-0952
neural keel1.54e-0952
nervous system2.44e-0975
central nervous system1.33e-0873
occipital lobe4.61e-0810
visual cortex4.61e-0810
neocortex4.61e-0810
gray matter9.03e-0834
neurectoderm1.15e-0764
neural plate1.15e-0764
presumptive neural plate1.15e-0764
brain1.86e-0747
future brain1.86e-0747
regional part of brain5.99e-0746
ecto-epithelium7.37e-0773
ectoderm-derived structure9.04e-0795
ectoderm9.04e-0795
presumptive ectoderm9.04e-0795
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